RNA–Protein interactions for RNA: ENST00000477984.1

LINC00336-201, long intergenic non-protein coding RNA 336, humanhuman

TSL 2 BASIC

Gene LINC00336, Length 2,107 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00336-201ENST00000477984 CYP4X1Q8N118 509 aa18.08■□□□□ 0.49
LINC00336-201ENST00000477984 ACAP3Q96P50 834 aa18.08■□□□□ 0.49
LINC00336-201ENST00000477984 ASMTLO95671 621 aa18.08■□□□□ 0.48
LINC00336-201ENST00000477984 SSR1P43307 286 aaKnown RBP18.08■□□□□ 0.48
LINC00336-201ENST00000477984 MGAT5Q09328 741 aa18.08■□□□□ 0.48
LINC00336-201ENST00000477984 DCAF4L1Q3SXM0 396 aa18.08■□□□□ 0.48
LINC00336-201ENST00000477984 PTPN20Q4JDL3 420 aa18.08■□□□□ 0.48
LINC00336-201ENST00000477984 ZNF365Q70YC5 407 aa18.08■□□□□ 0.48
LINC00336-201ENST00000477984 SLC4A11Q8NBS3 891 aa18.08■□□□□ 0.48
LINC00336-201ENST00000477984 DENND1AQ8TEH3 1009 aa18.08■□□□□ 0.48
LINC00336-201ENST00000477984 ATG4AQ8WYN0 398 aa18.08■□□□□ 0.48
LINC00336-201ENST00000477984 RMDN2Q96LZ7 410 aa18.08■□□□□ 0.48
LINC00336-201ENST00000477984 CFAP57Q96MR6 1250 aa18.08■□□□□ 0.48
LINC00336-201ENST00000477984 TMEM237Q96Q45 408 aa18.08■□□□□ 0.48
LINC00336-201ENST00000477984 R3HDM2Q9Y2K5 976 aaKnown RBP18.08■□□□□ 0.48
LINC00336-201ENST00000477984 ADCY6O43306 1168 aa18.07■□□□□ 0.48
LINC00336-201ENST00000477984 ATP11AP98196 1134 aa18.07■□□□□ 0.48
LINC00336-201ENST00000477984 CDC42EP1Q00587 391 aa18.07■□□□□ 0.48
LINC00336-201ENST00000477984 OGDHQ02218 1023 aa18.07■□□□□ 0.48
LINC00336-201ENST00000477984 PTPN11Q06124 597 aaPredicted RBP18.07■□□□□ 0.48
LINC00336-201ENST00000477984 NFX1Q12986 1120 aaKnown RBP18.07■□□□□ 0.48
LINC00336-201ENST00000477984 ECHDC2Q86YB7 292 aa18.07■□□□□ 0.48
LINC00336-201ENST00000477984 ANKLE1Q8NAG6 615 aa18.07■□□□□ 0.48
LINC00336-201ENST00000477984 INPP5DQ92835 1189 aa18.07■□□□□ 0.48
LINC00336-201ENST00000477984 TMEM176AQ96HP8 235 aa18.07■□□□□ 0.48
LINC00336-201ENST00000477984 HPDLQ96IR7 371 aa18.07■□□□□ 0.48
LINC00336-201ENST00000477984 HEMGNQ9BXL5 484 aa18.07■□□□□ 0.48
LINC00336-201ENST00000477984 ELOVL4Q9GZR5 314 aa18.07■□□□□ 0.48
LINC00336-201ENST00000477984 LRMDAQ9H2I8 198 aa18.07■□□□□ 0.48
LINC00336-201ENST00000477984 ADAMTS10Q9H324 1103 aa18.07■□□□□ 0.48
LINC00336-201ENST00000477984 RPL26L1Q9UNX3 145 aaKnown RBP18.07■□□□□ 0.48
LINC00336-201ENST00000477984 SMG5Q9UPR3 1016 aaKnown RBP18.07■□□□□ 0.48
LINC00336-201ENST00000477984 E7ENQ6 273 aa18.07■□□□□ 0.48
LINC00336-201ENST00000477984 RBP5P82980 135 aa18.07■□□□□ 0.48
LINC00336-201ENST00000477984 IZUMO3Q5VZ72 239 aa18.07■□□□□ 0.48
LINC00336-201ENST00000477984 TRABD2AQ86V40 505 aa18.07■□□□□ 0.48
LINC00336-201ENST00000477984 AGGF1Q8N302 714 aaeCLIP18.07■□□□□ 0.48
LINC00336-201ENST00000477984 TMEM130Q8N3G9 435 aa18.07■□□□□ 0.48
LINC00336-201ENST00000477984 CFAP61Q8NHU2 1237 aa18.07■□□□□ 0.48
LINC00336-201ENST00000477984 TWNKQ96RR1 684 aa18.07■□□□□ 0.48
LINC00336-201ENST00000477984 PITPNM3Q9BZ71 974 aa18.07■□□□□ 0.48
LINC00336-201ENST00000477984 WDR35Q9P2L0 1181 aa18.07■□□□□ 0.48
LINC00336-201ENST00000477984 CYTH4Q9UIA0 394 aa18.07■□□□□ 0.48
LINC00336-201ENST00000477984 L3MBTL1Q9Y468 752 aa18.07■□□□□ 0.48
LINC00336-201ENST00000477984 MGAMO43451 1857 aa18.06■□□□□ 0.48
LINC00336-201ENST00000477984 A6NJR5 290 aa18.06■□□□□ 0.48
LINC00336-201ENST00000477984 SIGLEC16A6NMB1 481 aa18.06■□□□□ 0.48
LINC00336-201ENST00000477984 PTPN7P35236 360 aa18.06■□□□□ 0.48
LINC00336-201ENST00000477984 GJC1P36383 396 aa18.06■□□□□ 0.48
LINC00336-201ENST00000477984 WDR4P57081 412 aaKnown RBP18.06■□□□□ 0.48
LINC00336-201ENST00000477984 MORN1Q5T089 497 aa18.06■□□□□ 0.48
LINC00336-201ENST00000477984 CYP4A22Q5TCH4 519 aa18.06■□□□□ 0.48
LINC00336-201ENST00000477984 APBB1IPQ7Z5R6 666 aaPredicted RBP18.06■□□□□ 0.48
LINC00336-201ENST00000477984 TTC39CQ8N584 583 aa18.06■□□□□ 0.48
LINC00336-201ENST00000477984 GDAP1Q8TB36 358 aa18.06■□□□□ 0.48
LINC00336-201ENST00000477984 SH3TC2Q8TF17 1288 aa18.06■□□□□ 0.48
LINC00336-201ENST00000477984 SLITRK1Q96PX8 696 aa18.06■□□□□ 0.48
LINC00336-201ENST00000477984 SETD4Q9NVD3 440 aa18.06■□□□□ 0.48
LINC00336-201ENST00000477984 DPP3Q9NY33 737 aa18.06■□□□□ 0.48
LINC00336-201ENST00000477984 DDX56Q9NY93 547 aaKnown RBP18.06■□□□□ 0.48
LINC00336-201ENST00000477984 USH1CQ9Y6N9 552 aa18.06■□□□□ 0.48
LINC00336-201ENST00000477984 F8VP50 259 aa18.05■□□□□ 0.48
LINC00336-201ENST00000477984 KRT1P04264 644 aa18.05■□□□□ 0.48
LINC00336-201ENST00000477984 VDRP11473 427 aa18.05■□□□□ 0.48
LINC00336-201ENST00000477984 FOXN2P32314 431 aa18.05■□□□□ 0.48
LINC00336-201ENST00000477984 MAGEA4P43358 317 aa18.05■□□□□ 0.48
LINC00336-201ENST00000477984 INCA1Q0VD86 236 aa18.05■□□□□ 0.48
LINC00336-201ENST00000477984 CMPK2Q5EBM0 449 aa18.05■□□□□ 0.48
LINC00336-201ENST00000477984 SRRM1Q8IYB3 904 aaKnown RBP18.05■□□□□ 0.48
LINC00336-201ENST00000477984 FNIP1Q8TF40 1166 aa18.05■□□□□ 0.48
LINC00336-201ENST00000477984 GCOM2Q9BZD3 368 aaPredicted RBP18.05■□□□□ 0.48
LINC00336-201ENST00000477984 PLEKHA5Q9HAU0 1116 aa18.05■□□□□ 0.48
LINC00336-201ENST00000477984 SSU72Q9NP77 194 aaKnown RBP18.05■□□□□ 0.48
LINC00336-201ENST00000477984 HMGXB4Q9UGU5 601 aa18.05■□□□□ 0.48
LINC00336-201ENST00000477984 DERAQ9Y315 318 aa18.05■□□□□ 0.48
LINC00336-201ENST00000477984 RASA4BC9J798 803 aa18.05■□□□□ 0.48
LINC00336-201ENST00000477984 RASA4O43374 803 aa18.05■□□□□ 0.48
LINC00336-201ENST00000477984 MICAL2O94851 1124 aa18.05■□□□□ 0.48
LINC00336-201ENST00000477984 F2P00734 622 aa18.05■□□□□ 0.48
LINC00336-201ENST00000477984 TCF4P15884 667 aa18.05■□□□□ 0.48
LINC00336-201ENST00000477984 PHACTR1Q9C0D0 580 aa18.05■□□□□ 0.48
LINC00336-201ENST00000477984 FETUBQ9UGM5 382 aa18.05■□□□□ 0.48
LINC00336-201ENST00000477984 BARX2Q9UMQ3 279 aaPredicted RBP18.05■□□□□ 0.48
LINC00336-201ENST00000477984 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.05■□□□□ 0.48
LINC00336-201ENST00000477984 GNEQ9Y223 722 aaKnown RBP18.05■□□□□ 0.48
LINC00336-201ENST00000477984 NRCAMQ92823 1304 aa18.04■□□□□ 0.48
LINC00336-201ENST00000477984 DNALI1O14645 258 aaPredicted RBP18.04■□□□□ 0.48
LINC00336-201ENST00000477984 DYNC1LI2O43237 492 aaPredicted RBP18.04■□□□□ 0.48
LINC00336-201ENST00000477984 GPR32O75388 356 aa18.04■□□□□ 0.48
LINC00336-201ENST00000477984 DCTN3O75935 186 aa18.04■□□□□ 0.48
LINC00336-201ENST00000477984 HMGCRP04035 888 aa18.04■□□□□ 0.48
LINC00336-201ENST00000477984 KRT3P12035 628 aa18.04■□□□□ 0.48
LINC00336-201ENST00000477984 PSEN1P49768 467 aa18.04■□□□□ 0.48
LINC00336-201ENST00000477984 PSMC1P62191 440 aaKnown RBP18.04■□□□□ 0.48
LINC00336-201ENST00000477984 SF3A3Q12874 501 aaKnown RBP eCLIP18.04■□□□□ 0.48
LINC00336-201ENST00000477984 MAP2K5Q13163 448 aa18.04■□□□□ 0.48
LINC00336-201ENST00000477984 SPARCL1Q14515 664 aa18.04■□□□□ 0.48
LINC00336-201ENST00000477984 SETDB1Q15047 1291 aa18.04■□□□□ 0.48
LINC00336-201ENST00000477984 PCBP1Q15365 356 aaKnown RBP eCLIP18.04■□□□□ 0.48
LINC00336-201ENST00000477984 KIZQ2M2Z5 673 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms