RNA–Protein interactions for RNA: ENST00000477983.1

LMBR1-216, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-216ENST00000477983 SPEF1Q9Y4P9 236 aa5.48□□□□□ -1.53
LMBR1-216ENST00000477983 DLC1Q96QB1 1528 aa5.48□□□□□ -1.53
LMBR1-216ENST00000477983 NSD3Q9BZ95 1437 aa5.48□□□□□ -1.53
LMBR1-216ENST00000477983 ADAMTSL3P82987 1691 aa5.47□□□□□ -1.53
LMBR1-216ENST00000477983 POLR3AO14802 1390 aaPredicted RBP5.47□□□□□ -1.53
LMBR1-216ENST00000477983 LRRC14BA6NHZ5 514 aa5.47□□□□□ -1.53
LMBR1-216ENST00000477983 LINC01548A6NM66 108 aa5.47□□□□□ -1.53
LMBR1-216ENST00000477983 GJB1P08034 283 aa5.47□□□□□ -1.53
LMBR1-216ENST00000477983 GNAI3P08754 354 aa5.47□□□□□ -1.53
LMBR1-216ENST00000477983 SMARCA1P28370 1054 aa5.47□□□□□ -1.53
LMBR1-216ENST00000477983 PSMC1P62191 440 aaKnown RBP5.47□□□□□ -1.53
LMBR1-216ENST00000477983 GNAI1P63096 354 aa5.47□□□□□ -1.53
LMBR1-216ENST00000477983 SLC10A2Q12908 348 aaPredicted RBP5.47□□□□□ -1.53
LMBR1-216ENST00000477983 LLGL1Q15334 1064 aa5.47□□□□□ -1.53
LMBR1-216ENST00000477983 SLC30A10Q6XR72 485 aa5.47□□□□□ -1.53
LMBR1-216ENST00000477983 Q8N9P0 234 aaPredicted RBP5.47□□□□□ -1.53
LMBR1-216ENST00000477983 C3orf20Q8ND61 904 aa5.47□□□□□ -1.53
LMBR1-216ENST00000477983 FBXO41Q8TF61 875 aa5.47□□□□□ -1.53
LMBR1-216ENST00000477983 SMAD5Q99717 465 aaKnown RBP5.47□□□□□ -1.53
LMBR1-216ENST00000477983 RWDD1Q9H446 243 aaPredicted RBP5.47□□□□□ -1.53
LMBR1-216ENST00000477983 SLIT1O75093 1534 aa5.47□□□□□ -1.53
LMBR1-216ENST00000477983 ADAMTS13Q76LX8 1427 aa5.47□□□□□ -1.53
LMBR1-216ENST00000477983 ARHGAP23Q9P227 1491 aa5.46□□□□□ -1.53
LMBR1-216ENST00000477983 WDR91A4D1P6 747 aa5.46□□□□□ -1.54
LMBR1-216ENST00000477983 ZNF785A8K8V0 405 aa5.46□□□□□ -1.54
LMBR1-216ENST00000477983 ARIH2O95376 493 aa5.46□□□□□ -1.54
LMBR1-216ENST00000477983 LATS1O95835 1130 aa5.46□□□□□ -1.54
LMBR1-216ENST00000477983 RHOP08100 348 aa5.46□□□□□ -1.54
LMBR1-216ENST00000477983 FTH1P19P0C7X4 201 aa5.46□□□□□ -1.54
LMBR1-216ENST00000477983 NR2F6P10588 404 aa5.46□□□□□ -1.54
LMBR1-216ENST00000477983 PRDX5P30044 214 aa5.46□□□□□ -1.54
LMBR1-216ENST00000477983 TNNT2P45379 298 aaPredicted RBP5.46□□□□□ -1.54
LMBR1-216ENST00000477983 RECQLP46063 649 aaPredicted RBP5.46□□□□□ -1.54
LMBR1-216ENST00000477983 TOB1P50616 345 aaPredicted RBP5.46□□□□□ -1.54
LMBR1-216ENST00000477983 BMPR2Q13873 1038 aa5.46□□□□□ -1.54
LMBR1-216ENST00000477983 KIF22Q14807 665 aa5.46□□□□□ -1.54
LMBR1-216ENST00000477983 PTPROQ16827 1216 aa5.46□□□□□ -1.54
LMBR1-216ENST00000477983 PLAC9Q5JTB6 97 aa5.46□□□□□ -1.54
LMBR1-216ENST00000477983 TAF2Q6P1X5 1199 aa5.46□□□□□ -1.54
LMBR1-216ENST00000477983 MORC1Q86VD1 984 aa5.46□□□□□ -1.54
LMBR1-216ENST00000477983 FAM90A1Q86YD7 464 aa5.46□□□□□ -1.54
LMBR1-216ENST00000477983 CNPPD1Q9BV87 410 aa5.46□□□□□ -1.54
LMBR1-216ENST00000477983 SMOC2Q9H3U7 446 aa5.46□□□□□ -1.54
LMBR1-216ENST00000477983 TERF2IPQ9NYB0 399 aa5.46□□□□□ -1.54
LMBR1-216ENST00000477983 PADI4Q9UM07 663 aa5.46□□□□□ -1.54
LMBR1-216ENST00000477983 POLHQ9Y253 713 aa5.46□□□□□ -1.54
LMBR1-216ENST00000477983 NR2E3Q9Y5X4 410 aa5.46□□□□□ -1.54
LMBR1-216ENST00000477983 CEP170BQ9Y4F5 1589 aaPredicted RBP5.46□□□□□ -1.54
LMBR1-216ENST00000477983 ZNF804BA4D1E1 1349 aa5.46□□□□□ -1.54
LMBR1-216ENST00000477983 KIF16BQ96L93 1317 aa5.46□□□□□ -1.54
LMBR1-216ENST00000477983 ANKRD36BQ8N2N9 1353 aa5.45□□□□□ -1.54
LMBR1-216ENST00000477983 RRP9O43818 475 aaKnown RBP5.45□□□□□ -1.54
LMBR1-216ENST00000477983 ZFXP17010 805 aaPredicted RBP5.45□□□□□ -1.54
LMBR1-216ENST00000477983 PDCP20941 246 aa5.45□□□□□ -1.54
LMBR1-216ENST00000477983 DRD4P21917 467 aa5.45□□□□□ -1.54
LMBR1-216ENST00000477983 PIK3CGP48736 1102 aa5.45□□□□□ -1.54
LMBR1-216ENST00000477983 CCT8P50990 548 aa5.45□□□□□ -1.54
LMBR1-216ENST00000477983 ZNF135P52742 658 aaPredicted RBP5.45□□□□□ -1.54
LMBR1-216ENST00000477983 EIF2B5Q13144 721 aaKnown RBP5.45□□□□□ -1.54
LMBR1-216ENST00000477983 EZH2Q15910 746 aaKnown RBP5.45□□□□□ -1.54
LMBR1-216ENST00000477983 SRSF7Q16629 238 aaKnown RBP eCLIP5.45□□□□□ -1.54
LMBR1-216ENST00000477983 THEMIS2Q5TEJ8 643 aa5.45□□□□□ -1.54
LMBR1-216ENST00000477983 SUMO4Q6EEV6 95 aa5.45□□□□□ -1.54
LMBR1-216ENST00000477983 PPP1R32Q7Z5V6 425 aa5.45□□□□□ -1.54
LMBR1-216ENST00000477983 PSD4Q8NDX1 1056 aa5.45□□□□□ -1.54
LMBR1-216ENST00000477983 FKBP10Q96AY3 582 aa5.45□□□□□ -1.54
LMBR1-216ENST00000477983 C1orf43Q9BWL3 253 aa5.45□□□□□ -1.54
LMBR1-216ENST00000477983 TPSD1Q9BZJ3 242 aa5.45□□□□□ -1.54
LMBR1-216ENST00000477983 SEMA4CQ9C0C4 833 aa5.45□□□□□ -1.54
LMBR1-216ENST00000477983 SIK2Q9H0K1 926 aa5.45□□□□□ -1.54
LMBR1-216ENST00000477983 SLAMF7Q9NQ25 335 aa5.45□□□□□ -1.54
LMBR1-216ENST00000477983 MRPS18AQ9NVS2 196 aaKnown RBP5.45□□□□□ -1.54
LMBR1-216ENST00000477983 DKK3Q9UBP4 350 aa5.45□□□□□ -1.54
LMBR1-216ENST00000477983 AGAP1Q9UPQ3 857 aa5.45□□□□□ -1.54
LMBR1-216ENST00000477983 PCDHA3Q9Y5H8 950 aa5.45□□□□□ -1.54
LMBR1-216ENST00000477983 FAM135BQ49AJ0 1406 aa5.45□□□□□ -1.54
LMBR1-216ENST00000477983 KNDC1Q76NI1 1749 aa5.45□□□□□ -1.54
LMBR1-216ENST00000477983 A0A1W2PP64 1363 aa5.44□□□□□ -1.54
LMBR1-216ENST00000477983 GOLGA6L3A6NEY3 463 aa5.44□□□□□ -1.54
LMBR1-216ENST00000477983 TARM1B6A8C7 271 aa5.44□□□□□ -1.54
LMBR1-216ENST00000477983 PROB1E7EW31 1015 aa5.44□□□□□ -1.54
LMBR1-216ENST00000477983 TECPR2O15040 1411 aa5.44□□□□□ -1.54
LMBR1-216ENST00000477983 SLC16A6O15403 523 aa5.44□□□□□ -1.54
LMBR1-216ENST00000477983 PLIN1O60240 522 aa5.44□□□□□ -1.54
LMBR1-216ENST00000477983 DTNBO60941 627 aa5.44□□□□□ -1.54
LMBR1-216ENST00000477983 FRAT2O75474 233 aaPredicted RBP5.44□□□□□ -1.54
LMBR1-216ENST00000477983 RARBP10826 455 aa5.44□□□□□ -1.54
LMBR1-216ENST00000477983 PCSK6P29122 969 aa5.44□□□□□ -1.54
LMBR1-216ENST00000477983 TERF1P54274 439 aa5.44□□□□□ -1.54
LMBR1-216ENST00000477983 NOGQ13253 232 aa5.44□□□□□ -1.54
LMBR1-216ENST00000477983 GRM1Q13255 1194 aa5.44□□□□□ -1.54
LMBR1-216ENST00000477983 ZNF551Q7Z340 670 aaPredicted RBP5.44□□□□□ -1.54
LMBR1-216ENST00000477983 CAMKK1Q8N5S9 505 aa5.44□□□□□ -1.54
LMBR1-216ENST00000477983 C9orf106Q8NAJ2 232 aa5.44□□□□□ -1.54
LMBR1-216ENST00000477983 PTPRUQ92729 1446 aa5.44□□□□□ -1.54
LMBR1-216ENST00000477983 RGMAQ96B86 450 aa5.44□□□□□ -1.54
LMBR1-216ENST00000477983 FAM136AQ96C01 138 aa5.44□□□□□ -1.54
LMBR1-216ENST00000477983 NELL2Q99435 816 aa5.44□□□□□ -1.54
LMBR1-216ENST00000477983 ACTRT3Q9BYD9 372 aa5.44□□□□□ -1.54
LMBR1-216ENST00000477983 PNNQ9H307 717 aaKnown RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms