RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 PPP3CBP16298 524 aa5.52□□□□□ -1.53
SMNDC1-205ENST00000477763 ABCB4P21439 1286 aa5.52□□□□□ -1.53
SMNDC1-205ENST00000477763 IL1R2P27930 398 aa5.52□□□□□ -1.53
SMNDC1-205ENST00000477763 PPM1AP35813 382 aa5.52□□□□□ -1.53
SMNDC1-205ENST00000477763 TECP42680 631 aa5.52□□□□□ -1.53
SMNDC1-205ENST00000477763 MAPK10P53779 464 aa5.52□□□□□ -1.53
SMNDC1-205ENST00000477763 LOXL3P58215 753 aa5.52□□□□□ -1.53
SMNDC1-205ENST00000477763 MRPS35P82673 323 aaKnown RBP5.52□□□□□ -1.53
SMNDC1-205ENST00000477763 KRT17Q04695 432 aa5.52□□□□□ -1.53
SMNDC1-205ENST00000477763 BOP1Q14137 746 aaKnown RBP5.52□□□□□ -1.53
SMNDC1-205ENST00000477763 ZNF169Q14929 603 aaPredicted RBP5.52□□□□□ -1.53
SMNDC1-205ENST00000477763 ERCC6LQ2NKX8 1250 aa5.52□□□□□ -1.53
SMNDC1-205ENST00000477763 CATSPERGQ6ZRH7 1159 aa5.52□□□□□ -1.53
SMNDC1-205ENST00000477763 SYTL1Q8IYJ3 562 aa5.52□□□□□ -1.53
SMNDC1-205ENST00000477763 B3GALNT2Q8NCR0 500 aa5.52□□□□□ -1.53
SMNDC1-205ENST00000477763 VPS37AQ8NEZ2 397 aa5.52□□□□□ -1.53
SMNDC1-205ENST00000477763 ZNF566Q969W8 418 aa5.52□□□□□ -1.53
SMNDC1-205ENST00000477763 KIAA1191Q96A73 305 aa5.52□□□□□ -1.53
SMNDC1-205ENST00000477763 PDLIM2Q96JY6 352 aa5.52□□□□□ -1.53
SMNDC1-205ENST00000477763 PTDSS2Q9BVG9 487 aa5.52□□□□□ -1.53
SMNDC1-205ENST00000477763 DHX36Q9H2U1 1008 aaKnown RBP5.52□□□□□ -1.53
SMNDC1-205ENST00000477763 TBC1D23Q9NUY8 699 aa5.52□□□□□ -1.53
SMNDC1-205ENST00000477763 LRIT1Q9P2V4 623 aa5.52□□□□□ -1.53
SMNDC1-205ENST00000477763 CCDC151A5D8V7 595 aa5.51□□□□□ -1.53
SMNDC1-205ENST00000477763 CLCA1A8K7I4 914 aa5.51□□□□□ -1.53
SMNDC1-205ENST00000477763 IFRD1O00458 451 aaPredicted RBP5.51□□□□□ -1.53
SMNDC1-205ENST00000477763 HNRNPDLO14979 420 aaKnown RBP5.51□□□□□ -1.53
SMNDC1-205ENST00000477763 DCLK1O15075 740 aa5.51□□□□□ -1.53
SMNDC1-205ENST00000477763 CCP110O43303 1012 aa5.51□□□□□ -1.53
SMNDC1-205ENST00000477763 HARSP12081 509 aaKnown RBP5.51□□□□□ -1.53
SMNDC1-205ENST00000477763 IL1R1P14778 569 aa5.51□□□□□ -1.53
SMNDC1-205ENST00000477763 BTF3P20290 206 aaKnown RBP5.51□□□□□ -1.53
SMNDC1-205ENST00000477763 CD6P30203 668 aa5.51□□□□□ -1.53
SMNDC1-205ENST00000477763 LILRA4P59901 499 aa5.51□□□□□ -1.53
SMNDC1-205ENST00000477763 GRM1Q13255 1194 aa5.51□□□□□ -1.53
SMNDC1-205ENST00000477763 PMS2P11Q13670 270 aa5.51□□□□□ -1.53
SMNDC1-205ENST00000477763 ARHGEF7Q14155 803 aa5.51□□□□□ -1.53
SMNDC1-205ENST00000477763 PRR16Q569H4 304 aa5.51□□□□□ -1.53
SMNDC1-205ENST00000477763 RBM20Q5T481 1227 aaKnown RBP5.51□□□□□ -1.53
SMNDC1-205ENST00000477763 OLFML1Q6UWY5 402 aa5.51□□□□□ -1.53
SMNDC1-205ENST00000477763 TMEM108Q6UXF1 575 aa5.51□□□□□ -1.53
SMNDC1-205ENST00000477763 EXOC8Q8IYI6 725 aa5.51□□□□□ -1.53
SMNDC1-205ENST00000477763 MYCBPAPQ8TBZ2 947 aa5.51□□□□□ -1.53
SMNDC1-205ENST00000477763 ACTRT2Q8TDY3 377 aa5.51□□□□□ -1.53
SMNDC1-205ENST00000477763 MAGEB5Q9BZ81 275 aa5.51□□□□□ -1.53
SMNDC1-205ENST00000477763 AMBRA1Q9C0C7 1298 aa5.51□□□□□ -1.53
SMNDC1-205ENST00000477763 WDR12Q9GZL7 423 aaKnown RBP5.51□□□□□ -1.53
SMNDC1-205ENST00000477763 FOXJ2Q9P0K8 574 aa5.51□□□□□ -1.53
SMNDC1-205ENST00000477763 MID2Q9UJV3 735 aa5.51□□□□□ -1.53
SMNDC1-205ENST00000477763 PCDHGB2Q9Y5G2 931 aa5.51□□□□□ -1.53
SMNDC1-205ENST00000477763 WDR27A2RRH5 827 aa5.5□□□□□ -1.53
SMNDC1-205ENST00000477763 RAB27BO00194 218 aa5.5□□□□□ -1.53
SMNDC1-205ENST00000477763 ADAMTS3O15072 1205 aa5.5□□□□□ -1.53
SMNDC1-205ENST00000477763 MYL4P12829 197 aa5.5□□□□□ -1.53
SMNDC1-205ENST00000477763 IDEP14735 1019 aa5.5□□□□□ -1.53
SMNDC1-205ENST00000477763 TPH1P17752 444 aa5.5□□□□□ -1.53
SMNDC1-205ENST00000477763 EEF1GP26641 437 aaKnown RBP5.5□□□□□ -1.53
SMNDC1-205ENST00000477763 ACVR2AP27037 513 aa5.5□□□□□ -1.53
SMNDC1-205ENST00000477763 PPIFP30405 207 aaKnown RBP5.5□□□□□ -1.53
SMNDC1-205ENST00000477763 HSPA7P48741 367 aa5.5□□□□□ -1.53
SMNDC1-205ENST00000477763 HNRNPMP52272 730 aaKnown RBP eCLIP5.5□□□□□ -1.53
SMNDC1-205ENST00000477763 ZNF134P52741 427 aa5.5□□□□□ -1.53
SMNDC1-205ENST00000477763 TNFAIP2Q03169 654 aa5.5□□□□□ -1.53
SMNDC1-205ENST00000477763 KRT72Q14CN4 511 aa5.5□□□□□ -1.53
SMNDC1-205ENST00000477763 PGBD2Q6P3X8 592 aa5.5□□□□□ -1.53
SMNDC1-205ENST00000477763 ZDHHC24Q6UX98 284 aa5.5□□□□□ -1.53
SMNDC1-205ENST00000477763 VGLL2Q8N8G2 317 aa5.5□□□□□ -1.53
SMNDC1-205ENST00000477763 FANCBQ8NB91 859 aa5.5□□□□□ -1.53
SMNDC1-205ENST00000477763 TOR1AIP2Q8NFQ8 470 aa5.5□□□□□ -1.53
SMNDC1-205ENST00000477763 GPR150Q8NGU9 434 aa5.5□□□□□ -1.53
SMNDC1-205ENST00000477763 PPP2R3CQ969Q6 453 aa5.5□□□□□ -1.53
SMNDC1-205ENST00000477763 FAM136AQ96C01 138 aa5.5□□□□□ -1.53
SMNDC1-205ENST00000477763 LRRC46Q96FV0 321 aa5.5□□□□□ -1.53
SMNDC1-205ENST00000477763 TMEM41AQ96HV5 264 aa5.5□□□□□ -1.53
SMNDC1-205ENST00000477763 FBXL20Q96IG2 436 aa5.5□□□□□ -1.53
SMNDC1-205ENST00000477763 ALG8Q9BVK2 526 aa5.5□□□□□ -1.53
SMNDC1-205ENST00000477763 TPSD1Q9BZJ3 242 aa5.5□□□□□ -1.53
SMNDC1-205ENST00000477763 FAM83DQ9H4H8 585 aa5.5□□□□□ -1.53
SMNDC1-205ENST00000477763 ALG13Q9NP73 1137 aaKnown RBP5.5□□□□□ -1.53
SMNDC1-205ENST00000477763 KLC4Q9NSK0 619 aa5.5□□□□□ -1.53
SMNDC1-205ENST00000477763 SALL3Q9BXA9 1300 aa5.49□□□□□ -1.53
SMNDC1-205ENST00000477763 POLR2AP24928 1970 aaKnown RBP5.49□□□□□ -1.53
SMNDC1-205ENST00000477763 AQP7P3A6NL99 342 aa5.49□□□□□ -1.53
SMNDC1-205ENST00000477763 ORC4O43929 436 aa5.49□□□□□ -1.53
SMNDC1-205ENST00000477763 A1BGP04217 495 aa5.49□□□□□ -1.53
SMNDC1-205ENST00000477763 CXCR5P32302 372 aa5.49□□□□□ -1.53
SMNDC1-205ENST00000477763 RARRES1P49788 294 aa5.49□□□□□ -1.53
SMNDC1-205ENST00000477763 CPT1AP50416 773 aa5.49□□□□□ -1.53
SMNDC1-205ENST00000477763 DGKEP52429 567 aa5.49□□□□□ -1.53
SMNDC1-205ENST00000477763 PRKAG1P54619 331 aa5.49□□□□□ -1.53
SMNDC1-205ENST00000477763 INHBEP58166 350 aa5.49□□□□□ -1.53
SMNDC1-205ENST00000477763 E2F2Q14209 437 aa5.49□□□□□ -1.53
SMNDC1-205ENST00000477763 STARD3Q14849 445 aa5.49□□□□□ -1.53
SMNDC1-205ENST00000477763 NPY5RQ15761 445 aa5.49□□□□□ -1.53
SMNDC1-205ENST00000477763 GRAMD1BQ3KR37 738 aa5.49□□□□□ -1.53
SMNDC1-205ENST00000477763 KRTAP15-1Q3LI76 137 aa5.49□□□□□ -1.53
SMNDC1-205ENST00000477763 FAM83BQ5T0W9 1011 aa5.49□□□□□ -1.53
SMNDC1-205ENST00000477763 RRAGBQ5VZM2 374 aa5.49□□□□□ -1.53
SMNDC1-205ENST00000477763 ICE2Q659A1 982 aa5.49□□□□□ -1.53
SMNDC1-205ENST00000477763 KAZNQ674X7 775 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms