RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 GPBP1Q86WP2 473 aa21.73■■□□□ 1.07
PDLIM1-202ENST00000477757 NT5DC4Q86YG4 428 aa21.73■■□□□ 1.07
PDLIM1-202ENST00000477757 SFTPA1Q8IWL2 248 aa21.73■■□□□ 1.07
PDLIM1-202ENST00000477757 KIAA1958Q8N8K9 716 aa21.73■■□□□ 1.07
PDLIM1-202ENST00000477757 CEP76Q8TAP6 659 aa21.73■■□□□ 1.07
PDLIM1-202ENST00000477757 LRRC15Q8TF66 581 aa21.73■■□□□ 1.07
PDLIM1-202ENST00000477757 HMGB4Q8WW32 186 aa21.73■■□□□ 1.07
PDLIM1-202ENST00000477757 FUBP3Q96I24 572 aaKnown RBP eCLIP21.73■■□□□ 1.07
PDLIM1-202ENST00000477757 FIZ1Q96SL8 496 aa21.73■■□□□ 1.07
PDLIM1-202ENST00000477757 GTPBP2Q9BX10 602 aaKnown RBP21.73■■□□□ 1.07
PDLIM1-202ENST00000477757 CAPN10Q9HC96 672 aa21.73■■□□□ 1.07
PDLIM1-202ENST00000477757 FSCN3Q9NQT6 498 aa21.73■■□□□ 1.07
PDLIM1-202ENST00000477757 AGO2Q9UKV8 859 aaKnown RBP21.73■■□□□ 1.07
PDLIM1-202ENST00000477757 LIMCH1Q9UPQ0 1083 aa21.73■■□□□ 1.07
PDLIM1-202ENST00000477757 STYXL1Q9Y6J8 313 aa21.73■■□□□ 1.07
PDLIM1-202ENST00000477757 TRAK2O60296 914 aa21.72■■□□□ 1.07
PDLIM1-202ENST00000477757 OPHN1O60890 802 aa21.72■■□□□ 1.07
PDLIM1-202ENST00000477757 SERPINF2P08697 491 aa21.72■■□□□ 1.07
PDLIM1-202ENST00000477757 PFKLP17858 780 aa21.72■■□□□ 1.07
PDLIM1-202ENST00000477757 MYL7Q01449 175 aa21.72■■□□□ 1.07
PDLIM1-202ENST00000477757 GFPT1Q06210 699 aaPredicted RBP21.72■■□□□ 1.07
PDLIM1-202ENST00000477757 MESP2Q0VG99 397 aa21.72■■□□□ 1.07
PDLIM1-202ENST00000477757 HNRNPDQ14103 355 aaKnown RBP21.72■■□□□ 1.07
PDLIM1-202ENST00000477757 DUOXA1Q1HG43 343 aa21.72■■□□□ 1.07
PDLIM1-202ENST00000477757 EOGTQ5NDL2 527 aa21.72■■□□□ 1.07
PDLIM1-202ENST00000477757 SLFN12LQ6IEE8 588 aa21.72■■□□□ 1.07
PDLIM1-202ENST00000477757 PDZD3Q86UT5 571 aa21.72■■□□□ 1.07
PDLIM1-202ENST00000477757 TMEM86AQ8N2M4 240 aa21.72■■□□□ 1.07
PDLIM1-202ENST00000477757 FAM184AQ8NB25 1140 aa21.72■■□□□ 1.07
PDLIM1-202ENST00000477757 GTF3C4Q9UKN8 822 aa21.72■■□□□ 1.07
PDLIM1-202ENST00000477757 GON4LQ3T8J9 2241 aa21.71■■□□□ 1.07
PDLIM1-202ENST00000477757 MYMKA6NI61 221 aa21.71■■□□□ 1.07
PDLIM1-202ENST00000477757 LEFTY2O00292 366 aa21.71■■□□□ 1.07
PDLIM1-202ENST00000477757 AP5Z1O43299 807 aa21.71■■□□□ 1.07
PDLIM1-202ENST00000477757 HUS1O60921 280 aa21.71■■□□□ 1.07
PDLIM1-202ENST00000477757 IL18RAPO95256 599 aa21.71■■□□□ 1.07
PDLIM1-202ENST00000477757 TIE1P35590 1138 aa21.71■■□□□ 1.07
PDLIM1-202ENST00000477757 MAGEA11P43364 429 aa21.71■■□□□ 1.07
PDLIM1-202ENST00000477757 KIR2DL1P43626 348 aaPredicted RBP21.71■■□□□ 1.07
PDLIM1-202ENST00000477757 CRELD2Q6UXH1 353 aaPredicted RBP21.71■■□□□ 1.07
PDLIM1-202ENST00000477757 RABEPKQ7Z6M1 372 aa21.71■■□□□ 1.07
PDLIM1-202ENST00000477757 FILIP1Q7Z7B0 1213 aa21.71■■□□□ 1.07
PDLIM1-202ENST00000477757 SPATA2LQ8IUW3 424 aaPredicted RBP21.71■■□□□ 1.07
PDLIM1-202ENST00000477757 SCN4BQ8IWT1 228 aa21.71■■□□□ 1.07
PDLIM1-202ENST00000477757 PNKPQ96T60 521 aa21.71■■□□□ 1.07
PDLIM1-202ENST00000477757 ASH1LQ9NR48 2969 aaKnown RBP21.7■■□□□ 1.06
PDLIM1-202ENST00000477757 TCRBV21S2A2A0A5A6 115 aa21.7■■□□□ 1.06
PDLIM1-202ENST00000477757 ADAM23O75077 832 aa21.7■■□□□ 1.06
PDLIM1-202ENST00000477757 KAT7O95251 611 aa21.7■■□□□ 1.06
PDLIM1-202ENST00000477757 APODP05090 189 aa21.7■■□□□ 1.06
PDLIM1-202ENST00000477757 CD59P13987 128 aa21.7■■□□□ 1.06
PDLIM1-202ENST00000477757 POLR2BP30876 1174 aaKnown RBP21.7■■□□□ 1.06
PDLIM1-202ENST00000477757 SCAPQ12770 1279 aa21.7■■□□□ 1.06
PDLIM1-202ENST00000477757 DHCR24Q15392 516 aa21.7■■□□□ 1.06
PDLIM1-202ENST00000477757 C19orf48Q6RUI8 117 aa21.7■■□□□ 1.06
PDLIM1-202ENST00000477757 MINDY1Q8N5J2 469 aa21.7■■□□□ 1.06
PDLIM1-202ENST00000477757 FLNBO75369 2602 aaKnown RBP21.7■■□□□ 1.06
PDLIM1-202ENST00000477757 HELZ2Q9BYK8 2649 aaKnown RBP21.7■■□□□ 1.06
PDLIM1-202ENST00000477757 CELSR3Q9NYQ7 3312 aa21.7■■□□□ 1.06
PDLIM1-202ENST00000477757 ADAMTS9Q9P2N4 1935 aa21.69■■□□□ 1.06
PDLIM1-202ENST00000477757 VWA3AA6NCI4 1184 aa21.69■■□□□ 1.06
PDLIM1-202ENST00000477757 SLC26A4O43511 780 aa21.69■■□□□ 1.06
PDLIM1-202ENST00000477757 PCSK1P29120 753 aa21.69■■□□□ 1.06
PDLIM1-202ENST00000477757 SLC6A11P48066 632 aa21.69■■□□□ 1.06
PDLIM1-202ENST00000477757 SLC7A9P82251 487 aa21.69■■□□□ 1.06
PDLIM1-202ENST00000477757 RESTQ13127 1097 aa21.69■■□□□ 1.06
PDLIM1-202ENST00000477757 C12orf40Q86WS4 652 aa21.69■■□□□ 1.06
PDLIM1-202ENST00000477757 LRRC52Q8N7C0 313 aa21.69■■□□□ 1.06
PDLIM1-202ENST00000477757 C1orf127Q8N9H9 656 aa21.69■■□□□ 1.06
PDLIM1-202ENST00000477757 SPATA17Q96L03 361 aa21.69■■□□□ 1.06
PDLIM1-202ENST00000477757 DNAAF2Q9NVR5 837 aaKnown RBP21.69■■□□□ 1.06
PDLIM1-202ENST00000477757 A0A0A0MRY4 1105 aa21.68■■□□□ 1.06
PDLIM1-202ENST00000477757 SLC9A3R1O14745 358 aaPredicted RBP21.68■■□□□ 1.06
PDLIM1-202ENST00000477757 TBCAO75347 108 aaKnown RBP21.68■■□□□ 1.06
PDLIM1-202ENST00000477757 OLFM2O95897 454 aa21.68■■□□□ 1.06
PDLIM1-202ENST00000477757 ITGB3P05106 788 aa21.68■■□□□ 1.06
PDLIM1-202ENST00000477757 RPL6Q02878 288 aaKnown RBP21.68■■□□□ 1.06
PDLIM1-202ENST00000477757 COL28A1Q2UY09 1125 aa21.68■■□□□ 1.06
PDLIM1-202ENST00000477757 EMC10Q5UCC4 262 aa21.68■■□□□ 1.06
PDLIM1-202ENST00000477757 OSTM1Q86WC4 334 aa21.68■■□□□ 1.06
PDLIM1-202ENST00000477757 ADGRF2Q8IZF7 708 aa21.68■■□□□ 1.06
PDLIM1-202ENST00000477757 ADGRG2Q8IZP9 1017 aa21.68■■□□□ 1.06
PDLIM1-202ENST00000477757 CEP295NLQ96MC4 621 aa21.68■■□□□ 1.06
PDLIM1-202ENST00000477757 ST6GALNAC4Q9H4F1 302 aa21.68■■□□□ 1.06
PDLIM1-202ENST00000477757 ARHGEF4Q9NR80 690 aa21.68■■□□□ 1.06
PDLIM1-202ENST00000477757 GDAP2Q9NXN4 497 aa21.68■■□□□ 1.06
PDLIM1-202ENST00000477757 AGAP1Q9UPQ3 857 aa21.68■■□□□ 1.06
PDLIM1-202ENST00000477757 APC2O95996 2303 aa21.67■■□□□ 1.06
PDLIM1-202ENST00000477757 ARHGAP33O14559 1287 aa21.67■■□□□ 1.06
PDLIM1-202ENST00000477757 GABRDO14764 452 aa21.67■■□□□ 1.06
PDLIM1-202ENST00000477757 HCRTO43612 131 aa21.67■■□□□ 1.06
PDLIM1-202ENST00000477757 SEC24BO95487 1268 aa21.67■■□□□ 1.06
PDLIM1-202ENST00000477757 ADH1CP00326 375 aa21.67■■□□□ 1.06
PDLIM1-202ENST00000477757 GRIA2P42262 883 aa21.67■■□□□ 1.06
PDLIM1-202ENST00000477757 TNFRSF4P43489 277 aa21.67■■□□□ 1.06
PDLIM1-202ENST00000477757 WNT7BP56706 349 aa21.67■■□□□ 1.06
PDLIM1-202ENST00000477757 TFAMQ00059 246 aaKnown RBP21.67■■□□□ 1.06
PDLIM1-202ENST00000477757 KDSRQ06136 332 aa21.67■■□□□ 1.06
PDLIM1-202ENST00000477757 RILPL1Q5EBL4 403 aa21.67■■□□□ 1.06
PDLIM1-202ENST00000477757 FAM171BQ6P995 826 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms