RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 PPFIBP1Q86W92 1011 aa5.2□□□□□ -1.58
CKS1B-207ENST00000477676 TMEM173Q86WV6 379 aaPredicted RBP5.2□□□□□ -1.58
CKS1B-207ENST00000477676 DCP2Q8IU60 420 aaKnown RBP5.2□□□□□ -1.58
CKS1B-207ENST00000477676 CCDC60Q8IWA6 550 aaPredicted RBP5.2□□□□□ -1.58
CKS1B-207ENST00000477676 SUGP1Q8IWZ8 645 aaKnown RBP5.2□□□□□ -1.58
CKS1B-207ENST00000477676 LINC01465Q8N7H1 131 aa5.2□□□□□ -1.58
CKS1B-207ENST00000477676 C12orf76Q8N812 135 aaPredicted RBP5.2□□□□□ -1.58
CKS1B-207ENST00000477676 KREMEN2Q8NCW0 462 aa5.2□□□□□ -1.58
CKS1B-207ENST00000477676 GIMAP8Q8ND71 665 aaPredicted RBP5.2□□□□□ -1.58
CKS1B-207ENST00000477676 RASGRP4Q8TDF6 673 aa5.2□□□□□ -1.58
CKS1B-207ENST00000477676 ATOH1Q92858 354 aaPredicted RBP5.2□□□□□ -1.58
CKS1B-207ENST00000477676 MAP4K1Q92918 833 aa5.2□□□□□ -1.58
CKS1B-207ENST00000477676 ZBTB8AQ96BR9 441 aa5.2□□□□□ -1.58
CKS1B-207ENST00000477676 RRP36Q96EU6 259 aaKnown RBP5.2□□□□□ -1.58
CKS1B-207ENST00000477676 RIPOR3Q96MK2 946 aa5.2□□□□□ -1.58
CKS1B-207ENST00000477676 MXRA8Q9BRK3 442 aa5.2□□□□□ -1.58
CKS1B-207ENST00000477676 FTHL17Q9BXU8 183 aa5.2□□□□□ -1.58
CKS1B-207ENST00000477676 LRRC2Q9BYS8 371 aa5.2□□□□□ -1.58
CKS1B-207ENST00000477676 VPS11Q9H270 941 aa5.2□□□□□ -1.58
CKS1B-207ENST00000477676 PSTPIP2Q9H939 334 aa5.2□□□□□ -1.58
CKS1B-207ENST00000477676 AGO4Q9HCK5 861 aaKnown RBP5.2□□□□□ -1.58
CKS1B-207ENST00000477676 TMEM260Q9NX78 707 aa5.2□□□□□ -1.58
CKS1B-207ENST00000477676 SLC9A2Q9UBY0 812 aa5.2□□□□□ -1.58
CKS1B-207ENST00000477676 INVSQ9Y283 1065 aa5.2□□□□□ -1.58
CKS1B-207ENST00000477676 VWA8A3KMH1 1905 aa5.2□□□□□ -1.58
CKS1B-207ENST00000477676 NFASCO94856 1347 aa5.2□□□□□ -1.58
CKS1B-207ENST00000477676 IGLV3-22A0A075B6J6 115 aa5.19□□□□□ -1.58
CKS1B-207ENST00000477676 NT5C1B-RDH14C9J2C7 533 aa5.19□□□□□ -1.58
CKS1B-207ENST00000477676 FAM86B1E9PN63 330 aa5.19□□□□□ -1.58
CKS1B-207ENST00000477676 DDX39AO00148 427 aaKnown RBP5.19□□□□□ -1.58
CKS1B-207ENST00000477676 PRC1O43663 620 aa5.19□□□□□ -1.58
CKS1B-207ENST00000477676 PI15O43692 258 aa5.19□□□□□ -1.58
CKS1B-207ENST00000477676 CLASP2O75122 1294 aaKnown RBP5.19□□□□□ -1.58
CKS1B-207ENST00000477676 RPS6KA5O75582 802 aa5.19□□□□□ -1.58
CKS1B-207ENST00000477676 DDAH1O94760 285 aa5.19□□□□□ -1.58
CKS1B-207ENST00000477676 FAM86B2P0C5J1 330 aa5.19□□□□□ -1.58
CKS1B-207ENST00000477676 STAG3L1P0CL83 205 aa5.19□□□□□ -1.58
CKS1B-207ENST00000477676 PMLP29590 882 aa5.19□□□□□ -1.58
CKS1B-207ENST00000477676 NBL1P41271 181 aa5.19□□□□□ -1.58
CKS1B-207ENST00000477676 STAT5BP51692 787 aa5.19□□□□□ -1.58
CKS1B-207ENST00000477676 TRDNQ13061 729 aa5.19□□□□□ -1.58
CKS1B-207ENST00000477676 TRAF1Q13077 416 aa5.19□□□□□ -1.58
CKS1B-207ENST00000477676 KIZQ2M2Z5 673 aa5.19□□□□□ -1.58
CKS1B-207ENST00000477676 KCNT2Q6UVM3 1135 aa5.19□□□□□ -1.58
CKS1B-207ENST00000477676 GLB1LQ6UWU2 654 aa5.19□□□□□ -1.58
CKS1B-207ENST00000477676 TMTC3Q6ZXV5 915 aa5.19□□□□□ -1.58
CKS1B-207ENST00000477676 SLC24A5Q71RS6 500 aa5.19□□□□□ -1.58
CKS1B-207ENST00000477676 THNSL1Q8IYQ7 743 aa5.19□□□□□ -1.58
CKS1B-207ENST00000477676 LGI4Q8N135 537 aa5.19□□□□□ -1.58
CKS1B-207ENST00000477676 ADCY4Q8NFM4 1077 aa5.19□□□□□ -1.58
CKS1B-207ENST00000477676 NCOA7Q8NI08 942 aa5.19□□□□□ -1.58
CKS1B-207ENST00000477676 MICAL1Q8TDZ2 1067 aa5.19□□□□□ -1.58
CKS1B-207ENST00000477676 CRYGNQ8WXF5 182 aa5.19□□□□□ -1.58
CKS1B-207ENST00000477676 AUTS2Q8WXX7 1259 aa5.19□□□□□ -1.58
CKS1B-207ENST00000477676 MRPS27Q92552 414 aaKnown RBP5.19□□□□□ -1.58
CKS1B-207ENST00000477676 CUL5Q93034 780 aa5.19□□□□□ -1.58
CKS1B-207ENST00000477676 PPP2R3CQ969Q6 453 aa5.19□□□□□ -1.58
CKS1B-207ENST00000477676 RCC1LQ96I51 464 aaKnown RBP5.19□□□□□ -1.58
CKS1B-207ENST00000477676 CDHR1Q96JP9 859 aa5.19□□□□□ -1.58
CKS1B-207ENST00000477676 ZNF668Q96K58 619 aaPredicted RBP5.19□□□□□ -1.58
CKS1B-207ENST00000477676 NEK1Q96PY6 1258 aa5.19□□□□□ -1.58
CKS1B-207ENST00000477676 PRRX2Q99811 253 aa5.19□□□□□ -1.58
CKS1B-207ENST00000477676 VN1R3Q9BXE9 311 aa5.19□□□□□ -1.58
CKS1B-207ENST00000477676 LSG1Q9H089 658 aaKnown RBP5.19□□□□□ -1.58
CKS1B-207ENST00000477676 PPT2Q9UMR5 302 aa5.19□□□□□ -1.58
CKS1B-207ENST00000477676 GINS2Q9Y248 185 aa5.19□□□□□ -1.58
CKS1B-207ENST00000477676 LZTS1Q9Y250 596 aa5.19□□□□□ -1.58
CKS1B-207ENST00000477676 PCDHB7Q9Y5E2 793 aa5.19□□□□□ -1.58
CKS1B-207ENST00000477676 RBM8AQ9Y5S9 174 aaKnown RBP5.19□□□□□ -1.58
CKS1B-207ENST00000477676 HS3ST3A1Q9Y663 406 aa5.19□□□□□ -1.58
CKS1B-207ENST00000477676 SPEGQ15772 3267 aa5.19□□□□□ -1.58
CKS1B-207ENST00000477676 CEP295Q9C0D2 2601 aa5.19□□□□□ -1.58
CKS1B-207ENST00000477676 SPAG17Q6Q759 2223 aa5.18□□□□□ -1.58
CKS1B-207ENST00000477676 DENND3A2RUS2 1198 aa5.18□□□□□ -1.58
CKS1B-207ENST00000477676 MAFGO15525 162 aa5.18□□□□□ -1.58
CKS1B-207ENST00000477676 HBP1O60381 514 aa5.18□□□□□ -1.58
CKS1B-207ENST00000477676 CSDE1O75534 798 aaKnown RBP5.18□□□□□ -1.58
CKS1B-207ENST00000477676 EPCAMP16422 314 aa5.18□□□□□ -1.58
CKS1B-207ENST00000477676 FGFR4P22455 802 aa5.18□□□□□ -1.58
CKS1B-207ENST00000477676 SREBF1P36956 1147 aa5.18□□□□□ -1.58
CKS1B-207ENST00000477676 CLCN3P51790 818 aa5.18□□□□□ -1.58
CKS1B-207ENST00000477676 CRYBB1P53674 252 aaPredicted RBP5.18□□□□□ -1.58
CKS1B-207ENST00000477676 KLF10Q13118 480 aa5.18□□□□□ -1.58
CKS1B-207ENST00000477676 DRP2Q13474 957 aa5.18□□□□□ -1.58
CKS1B-207ENST00000477676 SURF1Q15526 300 aa5.18□□□□□ -1.58
CKS1B-207ENST00000477676 DPY19L1Q2PZI1 675 aa5.18□□□□□ -1.58
CKS1B-207ENST00000477676 CEP55Q53EZ4 464 aa5.18□□□□□ -1.58
CKS1B-207ENST00000477676 SPOUT1Q5T280 376 aaKnown RBP5.18□□□□□ -1.58
CKS1B-207ENST00000477676 ETV3LQ6ZN32 361 aa5.18□□□□□ -1.58
CKS1B-207ENST00000477676 HEATR3Q7Z4Q2 680 aa5.18□□□□□ -1.58
CKS1B-207ENST00000477676 RALYLQ86SE5 291 aaKnown RBP5.18□□□□□ -1.58
CKS1B-207ENST00000477676 ECHDC2Q86YB7 292 aa5.18□□□□□ -1.58
CKS1B-207ENST00000477676 SLC39A11Q8N1S5 342 aa5.18□□□□□ -1.58
CKS1B-207ENST00000477676 NME8Q8N427 588 aa5.18□□□□□ -1.58
CKS1B-207ENST00000477676 MRPL43Q8N983 215 aaKnown RBP5.18□□□□□ -1.58
CKS1B-207ENST00000477676 C19orf47Q8N9M1 422 aaKnown RBP5.18□□□□□ -1.58
CKS1B-207ENST00000477676 CTCFLQ8NI51 663 aaPredicted RBP5.18□□□□□ -1.58
CKS1B-207ENST00000477676 SLC22A17Q8WUG5 538 aa5.18□□□□□ -1.58
CKS1B-207ENST00000477676 CPLX3Q8WVH0 158 aa5.18□□□□□ -1.58
CKS1B-207ENST00000477676 CDCA3Q99618 268 aaPredicted RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms