RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 PPM1LQ5SGD2 360 aa16.22■□□□□ 0.19
SEC13-215ENST00000477547 TAF3Q5VWG9 929 aa16.22■□□□□ 0.19
SEC13-215ENST00000477547 EP400NLQ6ZTU2 488 aa16.22■□□□□ 0.19
SEC13-215ENST00000477547 NOP9Q86U38 636 aaKnown RBP16.22■□□□□ 0.19
SEC13-215ENST00000477547 CNGA4Q8IV77 575 aa16.22■□□□□ 0.19
SEC13-215ENST00000477547 HDAC7Q8WUI4 952 aa16.22■□□□□ 0.19
SEC13-215ENST00000477547 SLC20A1Q8WUM9 679 aa16.22■□□□□ 0.19
SEC13-215ENST00000477547 TMEM30AQ9NV96 361 aa16.22■□□□□ 0.19
SEC13-215ENST00000477547 F8VP50 259 aa16.21■□□□□ 0.19
SEC13-215ENST00000477547 TRIM66O15016 1216 aa16.21■□□□□ 0.19
SEC13-215ENST00000477547 NCK2O43639 380 aa16.21■□□□□ 0.19
SEC13-215ENST00000477547 RFPL2O75678 378 aa16.21■□□□□ 0.19
SEC13-215ENST00000477547 MICAL2O94851 1124 aa16.21■□□□□ 0.19
SEC13-215ENST00000477547 ANXA13P27216 316 aa16.21■□□□□ 0.19
SEC13-215ENST00000477547 GRIK1P39086 918 aa16.21■□□□□ 0.19
SEC13-215ENST00000477547 TUFMP49411 452 aaKnown RBP16.21■□□□□ 0.19
SEC13-215ENST00000477547 RPL10AP62906 217 aaKnown RBP16.21■□□□□ 0.19
SEC13-215ENST00000477547 GOLGA8FQ08AF8 430 aa16.21■□□□□ 0.19
SEC13-215ENST00000477547 GOLGA8DPQ0D2H9 430 aa16.21■□□□□ 0.19
SEC13-215ENST00000477547 BST2Q10589 180 aaKnown RBP16.21■□□□□ 0.19
SEC13-215ENST00000477547 TWF1Q12792 350 aa16.21■□□□□ 0.19
SEC13-215ENST00000477547 TDRD12Q587J7 1177 aaKnown RBP16.21■□□□□ 0.19
SEC13-215ENST00000477547 LCLAT1Q6UWP7 414 aa16.21■□□□□ 0.19
SEC13-215ENST00000477547 CLEC20AQ6ZU45 233 aa16.21■□□□□ 0.19
SEC13-215ENST00000477547 TTC30AQ86WT1 665 aa16.21■□□□□ 0.19
SEC13-215ENST00000477547 SPC24Q8NBT2 197 aa16.21■□□□□ 0.19
SEC13-215ENST00000477547 ZNF606Q8WXB4 792 aa16.21■□□□□ 0.19
SEC13-215ENST00000477547 NOCTQ9UK39 431 aaKnown RBP16.21■□□□□ 0.19
SEC13-215ENST00000477547 NOTCH4Q99466 2003 aa16.21■□□□□ 0.19
SEC13-215ENST00000477547 GRXCR2A6NFK2 248 aa16.2■□□□□ 0.18
SEC13-215ENST00000477547 GOLGA6L6A8MZA4 724 aa16.2■□□□□ 0.18
SEC13-215ENST00000477547 H3BQ06 376 aaPredicted RBP16.2■□□□□ 0.18
SEC13-215ENST00000477547 DCXO43602 365 aa16.2■□□□□ 0.18
SEC13-215ENST00000477547 SETSIPP0DME0 302 aa16.2■□□□□ 0.18
SEC13-215ENST00000477547 HOXA9P31269 272 aa16.2■□□□□ 0.18
SEC13-215ENST00000477547 ALDH1A3P47895 512 aa16.2■□□□□ 0.18
SEC13-215ENST00000477547 MAP3K7CLP57077 242 aa16.2■□□□□ 0.18
SEC13-215ENST00000477547 SLC8A3P57103 927 aa16.2■□□□□ 0.18
SEC13-215ENST00000477547 ADAM15Q13444 863 aa16.2■□□□□ 0.18
SEC13-215ENST00000477547 COL19A1Q14993 1142 aa16.2■□□□□ 0.18
SEC13-215ENST00000477547 VEPH1Q14D04 833 aa16.2■□□□□ 0.18
SEC13-215ENST00000477547 CNGA2Q16280 664 aa16.2■□□□□ 0.18
SEC13-215ENST00000477547 MEA1Q16626 185 aa16.2■□□□□ 0.18
SEC13-215ENST00000477547 DDR2Q16832 855 aa16.2■□□□□ 0.18
SEC13-215ENST00000477547 SDHAF4Q5VUM1 108 aa16.2■□□□□ 0.18
SEC13-215ENST00000477547 TMEM184AQ6ZMB5 413 aa16.2■□□□□ 0.18
SEC13-215ENST00000477547 PASD1Q8IV76 773 aa16.2■□□□□ 0.18
SEC13-215ENST00000477547 ANKRD52Q8NB46 1076 aa16.2■□□□□ 0.18
SEC13-215ENST00000477547 STKLD1Q8NE28 680 aa16.2■□□□□ 0.18
SEC13-215ENST00000477547 PABPC5Q96DU9 382 aaKnown RBP16.2■□□□□ 0.18
SEC13-215ENST00000477547 SMOQ99835 787 aa16.2■□□□□ 0.18
SEC13-215ENST00000477547 PDCL3Q9H2J4 239 aa16.2■□□□□ 0.18
SEC13-215ENST00000477547 ABHD10Q9NUJ1 306 aa16.2■□□□□ 0.18
SEC13-215ENST00000477547 ZDHHC7Q9NXF8 308 aa16.2■□□□□ 0.18
SEC13-215ENST00000477547 AIPL1Q9NZN9 384 aa16.2■□□□□ 0.18
SEC13-215ENST00000477547 CEP83Q9Y592 693 aa16.2■□□□□ 0.18
SEC13-215ENST00000477547 HELZP42694 1942 aaKnown RBP16.2■□□□□ 0.18
SEC13-215ENST00000477547 AKR1B15C9JRZ8 316 aaPredicted RBP16.19■□□□□ 0.18
SEC13-215ENST00000477547 CCL16O15467 120 aa16.19■□□□□ 0.18
SEC13-215ENST00000477547 BEST1O76090 585 aa16.19■□□□□ 0.18
SEC13-215ENST00000477547 MMEP08473 750 aa16.19■□□□□ 0.18
SEC13-215ENST00000477547 CFHP08603 1231 aa16.19■□□□□ 0.18
SEC13-215ENST00000477547 HNRNPA1P09651 372 aaKnown RBP eCLIP16.19■□□□□ 0.18
SEC13-215ENST00000477547 EPHB3P54753 998 aa16.19■□□□□ 0.18
SEC13-215ENST00000477547 CDR2Q01850 454 aa16.19■□□□□ 0.18
SEC13-215ENST00000477547 KLHL30Q0D2K2 578 aa16.19■□□□□ 0.18
SEC13-215ENST00000477547 CTC1Q2NKJ3 1217 aa16.19■□□□□ 0.18
SEC13-215ENST00000477547 RARS2Q5T160 578 aaKnown RBP16.19■□□□□ 0.18
SEC13-215ENST00000477547 ANKRD54Q6NXT1 300 aa16.19■□□□□ 0.18
SEC13-215ENST00000477547 DENND1BQ6P3S1 775 aa16.19■□□□□ 0.18
SEC13-215ENST00000477547 RTL10Q7L3V2 364 aa16.19■□□□□ 0.18
SEC13-215ENST00000477547 ZNF677Q86XU0 584 aa16.19■□□□□ 0.18
SEC13-215ENST00000477547 ZMIZ2Q8NF64 920 aa16.19■□□□□ 0.18
SEC13-215ENST00000477547 UBA3Q8TBC4 463 aa16.19■□□□□ 0.18
SEC13-215ENST00000477547 GPR152Q8TDT2 470 aa16.19■□□□□ 0.18
SEC13-215ENST00000477547 DDX1Q92499 740 aaKnown RBP16.19■□□□□ 0.18
SEC13-215ENST00000477547 SYN2Q92777 582 aaPredicted RBP16.19■□□□□ 0.18
SEC13-215ENST00000477547 SECISBP2LQ93073 1101 aaKnown RBP16.19■□□□□ 0.18
SEC13-215ENST00000477547 C8orf48Q96LL4 319 aa16.19■□□□□ 0.18
SEC13-215ENST00000477547 PHOX2BQ99453 314 aa16.19■□□□□ 0.18
SEC13-215ENST00000477547 DNAJC7Q99615 494 aa16.19■□□□□ 0.18
SEC13-215ENST00000477547 DUSP16Q9BY84 665 aa16.19■□□□□ 0.18
SEC13-215ENST00000477547 CSNK1G1Q9HCP0 422 aa16.19■□□□□ 0.18
SEC13-215ENST00000477547 SEPT11Q9NVA2 429 aaKnown RBP16.19■□□□□ 0.18
SEC13-215ENST00000477547 PCDHGC3Q9UN70 934 aa16.19■□□□□ 0.18
SEC13-215ENST00000477547 NUP210Q8TEM1 1887 aaPredicted RBP16.19■□□□□ 0.18
SEC13-215ENST00000477547 XPO1O14980 1071 aaKnown RBP16.19■□□□□ 0.18
SEC13-215ENST00000477547 XYLBO75191 536 aa16.19■□□□□ 0.18
SEC13-215ENST00000477547 PRKCIP41743 596 aa16.19■□□□□ 0.18
SEC13-215ENST00000477547 ADKP55263 362 aaKnown RBP16.19■□□□□ 0.18
SEC13-215ENST00000477547 PDE4CQ08493 712 aa16.19■□□□□ 0.18
SEC13-215ENST00000477547 PKDCCQ504Y2 493 aa16.19■□□□□ 0.18
SEC13-215ENST00000477547 IRF2BP2Q7Z5L9 587 aa16.19■□□□□ 0.18
SEC13-215ENST00000477547 ELMOD1Q8N336 334 aa16.19■□□□□ 0.18
SEC13-215ENST00000477547 C12orf76Q8N812 135 aaPredicted RBP16.19■□□□□ 0.18
SEC13-215ENST00000477547 OR8K1Q8NGG5 319 aa16.19■□□□□ 0.18
SEC13-215ENST00000477547 GIPC2Q8TF65 315 aa16.19■□□□□ 0.18
SEC13-215ENST00000477547 ANP32BQ92688 251 aaKnown RBP16.19■□□□□ 0.18
SEC13-215ENST00000477547 KCNK16Q96T55 309 aa16.19■□□□□ 0.18
SEC13-215ENST00000477547 APOL5Q9BWW9 433 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms