RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 PRSS36Q5K4E3 855 aa13.9□□□□□ -0.18
TOP3A-205ENST00000477508 PPP1R26Q5T8A7 1209 aaPredicted RBP13.9□□□□□ -0.18
TOP3A-205ENST00000477508 GET4Q7L5D6 327 aaPredicted RBP13.9□□□□□ -0.18
TOP3A-205ENST00000477508 TMC8Q8IU68 726 aa13.9□□□□□ -0.18
TOP3A-205ENST00000477508 NUP93Q8N1F7 819 aa13.9□□□□□ -0.18
TOP3A-205ENST00000477508 ANKRD52Q8NB46 1076 aa13.9□□□□□ -0.18
TOP3A-205ENST00000477508 NEK11Q8NG66 645 aa13.9□□□□□ -0.18
TOP3A-205ENST00000477508 NXPE3Q969Y0 559 aa13.9□□□□□ -0.18
TOP3A-205ENST00000477508 UHRF1Q96T88 793 aaPredicted RBP13.9□□□□□ -0.18
TOP3A-205ENST00000477508 TTLL2Q9BWV7 592 aa13.9□□□□□ -0.18
TOP3A-205ENST00000477508 LRRC3Q9BY71 257 aa13.9□□□□□ -0.18
TOP3A-205ENST00000477508 STK33Q9BYT3 514 aa13.9□□□□□ -0.18
TOP3A-205ENST00000477508 UBXN6Q9BZV1 441 aa13.9□□□□□ -0.18
TOP3A-205ENST00000477508 EPS15L1Q9UBC2 864 aa13.9□□□□□ -0.18
TOP3A-205ENST00000477508 SIK3Q9Y2K2 1263 aa13.9□□□□□ -0.18
TOP3A-205ENST00000477508 C5orf42Q9H799 3197 aa13.9□□□□□ -0.18
TOP3A-205ENST00000477508 MYH10P35580 1976 aa13.89□□□□□ -0.19
TOP3A-205ENST00000477508 A0A1B0GTH6 734 aa13.89□□□□□ -0.19
TOP3A-205ENST00000477508 A0A1W2PQC6 194 aa13.89□□□□□ -0.19
TOP3A-205ENST00000477508 RNF225M0QZC1 329 aaPredicted RBP13.89□□□□□ -0.19
TOP3A-205ENST00000477508 TPM3P06753 285 aa13.89□□□□□ -0.19
TOP3A-205ENST00000477508 DDX6P26196 483 aaKnown RBP eCLIP13.89□□□□□ -0.19
TOP3A-205ENST00000477508 GABRR2P28476 465 aa13.89□□□□□ -0.19
TOP3A-205ENST00000477508 USP8P40818 1118 aa13.89□□□□□ -0.19
TOP3A-205ENST00000477508 GPR15P49685 360 aa13.89□□□□□ -0.19
TOP3A-205ENST00000477508 BCAT1P54687 386 aa13.89□□□□□ -0.19
TOP3A-205ENST00000477508 FANCCQ00597 558 aa13.89□□□□□ -0.19
TOP3A-205ENST00000477508 PTK2Q05397 1052 aa13.89□□□□□ -0.19
TOP3A-205ENST00000477508 MEA1Q16626 185 aa13.89□□□□□ -0.19
TOP3A-205ENST00000477508 DPY19L2P1Q6NXN4 242 aa13.89□□□□□ -0.19
TOP3A-205ENST00000477508 GJB7Q6PEY0 223 aa13.89□□□□□ -0.19
TOP3A-205ENST00000477508 LCLAT1Q6UWP7 414 aa13.89□□□□□ -0.19
TOP3A-205ENST00000477508 FMNL3Q8IVF7 1028 aa13.89□□□□□ -0.19
TOP3A-205ENST00000477508 HS6ST3Q8IZP7 471 aa13.89□□□□□ -0.19
TOP3A-205ENST00000477508 GJD3Q8N144 294 aa13.89□□□□□ -0.19
TOP3A-205ENST00000477508 ITFG1Q8TB96 612 aa13.89□□□□□ -0.19
TOP3A-205ENST00000477508 FEZF2Q8TBJ5 459 aa13.89□□□□□ -0.19
TOP3A-205ENST00000477508 GPR152Q8TDT2 470 aa13.89□□□□□ -0.19
TOP3A-205ENST00000477508 FGF13Q92913 245 aa13.89□□□□□ -0.19
TOP3A-205ENST00000477508 NAA15Q9BXJ9 866 aaKnown RBP13.89□□□□□ -0.19
TOP3A-205ENST00000477508 FBXO44Q9H4M3 255 aa13.89□□□□□ -0.19
TOP3A-205ENST00000477508 MAGED2Q9UNF1 606 aaPredicted RBP13.89□□□□□ -0.19
TOP3A-205ENST00000477508 NOTCH4Q99466 2003 aa13.89□□□□□ -0.19
TOP3A-205ENST00000477508 C2CD4DB7Z1M9 353 aa13.88□□□□□ -0.19
TOP3A-205ENST00000477508 O00370 1275 aa13.88□□□□□ -0.19
TOP3A-205ENST00000477508 FOXN3O00409 490 aaPredicted RBP13.88□□□□□ -0.19
TOP3A-205ENST00000477508 SETSIPP0DME0 302 aa13.88□□□□□ -0.19
TOP3A-205ENST00000477508 LAMP2P13473 410 aa13.88□□□□□ -0.19
TOP3A-205ENST00000477508 YWHAQP27348 245 aa13.88□□□□□ -0.19
TOP3A-205ENST00000477508 SSTR3P32745 418 aaPredicted RBP13.88□□□□□ -0.19
TOP3A-205ENST00000477508 CACNA2D1P54289 1103 aa13.88□□□□□ -0.19
TOP3A-205ENST00000477508 UBASH3AP57075 661 aa13.88□□□□□ -0.19
TOP3A-205ENST00000477508 MAP3K7CLP57077 242 aa13.88□□□□□ -0.19
TOP3A-205ENST00000477508 APBA1Q02410 837 aa13.88□□□□□ -0.19
TOP3A-205ENST00000477508 RAPGEF1Q13905 1077 aa13.88□□□□□ -0.19
TOP3A-205ENST00000477508 DRAP1Q14919 205 aaPredicted RBP13.88□□□□□ -0.19
TOP3A-205ENST00000477508 NR1I3Q14994 352 aa13.88□□□□□ -0.19
TOP3A-205ENST00000477508 SLC5A9Q2M3M2 681 aa13.88□□□□□ -0.19
TOP3A-205ENST00000477508 SDHAF4Q5VUM1 108 aa13.88□□□□□ -0.19
TOP3A-205ENST00000477508 CLEC20AQ6ZU45 233 aa13.88□□□□□ -0.19
TOP3A-205ENST00000477508 MTSS1LQ765P7 747 aa13.88□□□□□ -0.19
TOP3A-205ENST00000477508 NPAS3Q8IXF0 933 aa13.88□□□□□ -0.19
TOP3A-205ENST00000477508 FAM71AQ8IYT1 594 aa13.88□□□□□ -0.19
TOP3A-205ENST00000477508 PDZD8Q8NEN9 1154 aa13.88□□□□□ -0.19
TOP3A-205ENST00000477508 SHKBP1Q8TBC3 707 aa13.88□□□□□ -0.19
TOP3A-205ENST00000477508 OVCA2Q8WZ82 227 aa13.88□□□□□ -0.19
TOP3A-205ENST00000477508 MRPS31Q92665 395 aaKnown RBP13.88□□□□□ -0.19
TOP3A-205ENST00000477508 SLITRK1Q96PX8 696 aa13.88□□□□□ -0.19
TOP3A-205ENST00000477508 MYADMQ96S97 322 aa13.88□□□□□ -0.19
TOP3A-205ENST00000477508 KCNK16Q96T55 309 aa13.88□□□□□ -0.19
TOP3A-205ENST00000477508 SMOQ99835 787 aa13.88□□□□□ -0.19
TOP3A-205ENST00000477508 GANQ9H2C0 597 aa13.88□□□□□ -0.19
TOP3A-205ENST00000477508 ATXN3LQ9H3M9 355 aa13.88□□□□□ -0.19
TOP3A-205ENST00000477508 ZNF334Q9HCZ1 680 aaPredicted RBP13.88□□□□□ -0.19
TOP3A-205ENST00000477508 FAM207AQ9NSI2 230 aaPredicted RBP13.88□□□□□ -0.19
TOP3A-205ENST00000477508 TMEM30AQ9NV96 361 aa13.88□□□□□ -0.19
TOP3A-205ENST00000477508 IL37Q9NZH6 218 aa13.88□□□□□ -0.19
TOP3A-205ENST00000477508 TSPAN16Q9UKR8 245 aa13.88□□□□□ -0.19
TOP3A-205ENST00000477508 NCANO14594 1321 aa13.88□□□□□ -0.19
TOP3A-205ENST00000477508 A0A1W2PRU2 124 aa13.87□□□□□ -0.19
TOP3A-205ENST00000477508 TNFRSF10BO14763 440 aa13.87□□□□□ -0.19
TOP3A-205ENST00000477508 F11P03951 625 aa13.87□□□□□ -0.19
TOP3A-205ENST00000477508 PFKLP17858 780 aa13.87□□□□□ -0.19
TOP3A-205ENST00000477508 GNA15P30679 374 aa13.87□□□□□ -0.19
TOP3A-205ENST00000477508 CCR2P41597 374 aa13.87□□□□□ -0.19
TOP3A-205ENST00000477508 PDE6CP51160 858 aa13.87□□□□□ -0.19
TOP3A-205ENST00000477508 POLR2FP61218 127 aaKnown RBP13.87□□□□□ -0.19
TOP3A-205ENST00000477508 BST2Q10589 180 aaKnown RBP13.87□□□□□ -0.19
TOP3A-205ENST00000477508 MTMR3Q13615 1198 aa13.87□□□□□ -0.19
TOP3A-205ENST00000477508 GOLGA7BQ2TAP0 167 aa13.87□□□□□ -0.19
TOP3A-205ENST00000477508 GAREM2Q75VX8 874 aa13.87□□□□□ -0.19
TOP3A-205ENST00000477508 ZMIZ2Q8NF64 920 aa13.87□□□□□ -0.19
TOP3A-205ENST00000477508 TCEAL4Q96EI5 215 aa13.87□□□□□ -0.19
TOP3A-205ENST00000477508 SPAG5Q96R06 1193 aa13.87□□□□□ -0.19
TOP3A-205ENST00000477508 IL21Q9HBE4 155 aa13.87□□□□□ -0.19
TOP3A-205ENST00000477508 TRPM5Q9NZQ8 1165 aa13.87□□□□□ -0.19
TOP3A-205ENST00000477508 IGSF9Q9P2J2 1179 aa13.87□□□□□ -0.19
TOP3A-205ENST00000477508 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.87□□□□□ -0.19
TOP3A-205ENST00000477508 FHOD1Q9Y613 1164 aa13.87□□□□□ -0.19
TOP3A-205ENST00000477508 DOCK8Q8NF50 2099 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms