RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 RAB6CQ9H0N0 254 aa12.07□□□□□ -0.48
NUP188-205ENST00000477069 CCDC134Q9H6E4 229 aa12.07□□□□□ -0.48
NUP188-205ENST00000477069 ASNSD1Q9NWL6 643 aa12.07□□□□□ -0.48
NUP188-205ENST00000477069 SAE1Q9UBE0 346 aaPredicted RBP12.07□□□□□ -0.48
NUP188-205ENST00000477069 GGA2Q9UJY4 613 aa12.07□□□□□ -0.48
NUP188-205ENST00000477069 SNX9Q9Y5X1 595 aa12.07□□□□□ -0.48
NUP188-205ENST00000477069 PSEN2P49810 448 aa12.06□□□□□ -0.48
NUP188-205ENST00000477069 GDF10P55107 478 aa12.06□□□□□ -0.48
NUP188-205ENST00000477069 GPS1Q13098 491 aa12.06□□□□□ -0.48
NUP188-205ENST00000477069 SNX17Q15036 470 aa12.06□□□□□ -0.48
NUP188-205ENST00000477069 QPCTQ16769 361 aa12.06□□□□□ -0.48
NUP188-205ENST00000477069 PMF1Q6P1K2 205 aa12.06□□□□□ -0.48
NUP188-205ENST00000477069 PAXIP1Q6ZW49 1069 aaPredicted RBP12.06□□□□□ -0.48
NUP188-205ENST00000477069 B4GALNT4Q76KP1 1039 aa12.06□□□□□ -0.48
NUP188-205ENST00000477069 LIMS2Q7Z4I7 341 aa12.06□□□□□ -0.48
NUP188-205ENST00000477069 TMEM110Q86TL2 294 aa12.06□□□□□ -0.48
NUP188-205ENST00000477069 TTC13Q8NBP0 860 aa12.06□□□□□ -0.48
NUP188-205ENST00000477069 SLC35F5Q8WV83 523 aa12.06□□□□□ -0.48
NUP188-205ENST00000477069 DNAJB3Q8WWF6 145 aa12.06□□□□□ -0.48
NUP188-205ENST00000477069 PRCCQ92733 491 aaPredicted RBP12.06□□□□□ -0.48
NUP188-205ENST00000477069 ZNF317Q96PQ6 595 aaPredicted RBP12.06□□□□□ -0.48
NUP188-205ENST00000477069 RBM15Q96T37 977 aaKnown RBP eCLIP12.06□□□□□ -0.482e-8■■■■□ 24.5
NUP188-205ENST00000477069 FAM169AQ9Y6X4 670 aa12.06□□□□□ -0.48
NUP188-205ENST00000477069 SETSIPP0DME0 302 aa12.06□□□□□ -0.48
NUP188-205ENST00000477069 PECAM1P16284 738 aaPredicted RBP12.06□□□□□ -0.48
NUP188-205ENST00000477069 MAGEA4P43358 317 aa12.06□□□□□ -0.48
NUP188-205ENST00000477069 YARSP54577 528 aaKnown RBP12.06□□□□□ -0.48
NUP188-205ENST00000477069 CCL14Q16627 93 aa12.06□□□□□ -0.48
NUP188-205ENST00000477069 SOWAHAQ2M3V2 549 aa12.06□□□□□ -0.48
NUP188-205ENST00000477069 ARHGAP17Q68EM7 881 aa12.06□□□□□ -0.48
NUP188-205ENST00000477069 CEP128Q6ZU80 1094 aa12.06□□□□□ -0.48
NUP188-205ENST00000477069 DPH6Q7L8W6 267 aa12.06□□□□□ -0.48
NUP188-205ENST00000477069 ACOT1Q86TX2 421 aa12.06□□□□□ -0.48
NUP188-205ENST00000477069 UNC93AQ86WB7 457 aa12.06□□□□□ -0.48
NUP188-205ENST00000477069 SPATS2Q86XZ4 545 aaKnown RBP12.06□□□□□ -0.48
NUP188-205ENST00000477069 RASAL3Q86YV0 1011 aa12.06□□□□□ -0.48
NUP188-205ENST00000477069 BEST2Q8NFU1 509 aa12.06□□□□□ -0.48
NUP188-205ENST00000477069 KBTBD7Q8WVZ9 684 aa12.06□□□□□ -0.48
NUP188-205ENST00000477069 RXFP2Q8WXD0 754 aa12.06□□□□□ -0.48
NUP188-205ENST00000477069 CTNNAL1Q9UBT7 734 aa12.06□□□□□ -0.48
NUP188-205ENST00000477069 PCSK1NQ9UHG2 260 aa12.06□□□□□ -0.48
NUP188-205ENST00000477069 SHOC2Q9UQ13 582 aa12.06□□□□□ -0.48
NUP188-205ENST00000477069 GINS2Q9Y248 185 aa12.06□□□□□ -0.48
NUP188-205ENST00000477069 APOC4-APOC2K7ER74 178 aa12.05□□□□□ -0.48
NUP188-205ENST00000477069 PIK3R2O00459 728 aa12.05□□□□□ -0.48
NUP188-205ENST00000477069 TREHO43280 583 aa12.05□□□□□ -0.48
NUP188-205ENST00000477069 RNF8O76064 485 aa12.05□□□□□ -0.48
NUP188-205ENST00000477069 APOC2P02655 101 aa12.05□□□□□ -0.48
NUP188-205ENST00000477069 RPL34P49207 117 aaKnown RBP12.05□□□□□ -0.48
NUP188-205ENST00000477069 DYNLT1P63172 113 aa12.05□□□□□ -0.48
NUP188-205ENST00000477069 CCDC14Q49A88 953 aa12.05□□□□□ -0.48
NUP188-205ENST00000477069 GLRA4Q5JXX5 417 aa12.05□□□□□ -0.48
NUP188-205ENST00000477069 C6orf89Q6UWU4 347 aa12.05□□□□□ -0.48
NUP188-205ENST00000477069 C9orf72Q96LT7 481 aa12.05□□□□□ -0.48
NUP188-205ENST00000477069 MIS12Q9H081 205 aa12.05□□□□□ -0.48
NUP188-205ENST00000477069 RRAGCQ9HB90 399 aa12.05□□□□□ -0.48
NUP188-205ENST00000477069 UBQLN1Q9UMX0 589 aaKnown RBP12.05□□□□□ -0.48
NUP188-205ENST00000477069 Q9Y3F1 56 aa12.05□□□□□ -0.48
NUP188-205ENST00000477069 KCNE1P15382 129 aa12.05□□□□□ -0.48
NUP188-205ENST00000477069 DRD4P21917 467 aa12.05□□□□□ -0.48
NUP188-205ENST00000477069 GCAP28676 217 aa12.05□□□□□ -0.48
NUP188-205ENST00000477069 C15orf59Q2T9L4 293 aaPredicted RBP12.05□□□□□ -0.48
NUP188-205ENST00000477069 CCDC38Q502W7 563 aa12.05□□□□□ -0.48
NUP188-205ENST00000477069 OR6B2Q6IFH4 312 aa12.05□□□□□ -0.48
NUP188-205ENST00000477069 CHADLQ6NUI6 762 aa12.05□□□□□ -0.48
NUP188-205ENST00000477069 VSTM1Q6UX27 236 aa12.05□□□□□ -0.48
NUP188-205ENST00000477069 KCTD6Q8NC69 237 aa12.05□□□□□ -0.48
NUP188-205ENST00000477069 STK32AQ8WU08 396 aa12.05□□□□□ -0.48
NUP188-205ENST00000477069 HSPH1Q92598 858 aa12.05□□□□□ -0.48
NUP188-205ENST00000477069 SELENOSQ9BQE4 189 aa12.05□□□□□ -0.48
NUP188-205ENST00000477069 PHACTR1Q9C0D0 580 aa12.05□□□□□ -0.48
NUP188-205ENST00000477069 DPEP3Q9H4B8 488 aa12.05□□□□□ -0.48
NUP188-205ENST00000477069 SGK1O00141 431 aa12.04□□□□□ -0.48
NUP188-205ENST00000477069 NDC80O14777 642 aa12.04□□□□□ -0.48
NUP188-205ENST00000477069 AKAP5P24588 427 aa12.04□□□□□ -0.48
NUP188-205ENST00000477069 CPT1AP50416 773 aa12.04□□□□□ -0.48
NUP188-205ENST00000477069 CDR1P51861 262 aa12.04□□□□□ -0.48
NUP188-205ENST00000477069 ZNF200P98182 395 aaPredicted RBP12.04□□□□□ -0.48
NUP188-205ENST00000477069 DPYSL3Q14195 570 aa12.04□□□□□ -0.48
NUP188-205ENST00000477069 STAT4Q14765 748 aa12.04□□□□□ -0.48
NUP188-205ENST00000477069 C17orf99Q6UX52 265 aa12.04□□□□□ -0.48
NUP188-205ENST00000477069 TAOK1Q7L7X3 1001 aa12.04□□□□□ -0.48
NUP188-205ENST00000477069 CYP4X1Q8N118 509 aa12.04□□□□□ -0.48
NUP188-205ENST00000477069 TSPAN18Q96SJ8 248 aa12.04□□□□□ -0.48
NUP188-205ENST00000477069 RSAD1Q9HA92 442 aa12.04□□□□□ -0.48
NUP188-205ENST00000477069 GDAP2Q9NXN4 497 aa12.04□□□□□ -0.48
NUP188-205ENST00000477069 SMIM28A0A1B0GU29 152 aa12.04□□□□□ -0.48
NUP188-205ENST00000477069 TRIM66O15016 1216 aa12.04□□□□□ -0.48
NUP188-205ENST00000477069 SPTLC1O15269 473 aa12.04□□□□□ -0.48
NUP188-205ENST00000477069 PAPSS1O43252 624 aaPredicted RBP12.04□□□□□ -0.48
NUP188-205ENST00000477069 HCRTO43612 131 aa12.04□□□□□ -0.48
NUP188-205ENST00000477069 FGFR1P11362 822 aa12.04□□□□□ -0.48
NUP188-205ENST00000477069 PDGFRAP16234 1089 aa12.04□□□□□ -0.48
NUP188-205ENST00000477069 RGS7P49802 495 aa12.04□□□□□ -0.48
NUP188-205ENST00000477069 SLC6A3Q01959 620 aa12.04□□□□□ -0.48
NUP188-205ENST00000477069 FASTKD3Q14CZ7 662 aaKnown RBP12.04□□□□□ -0.48
NUP188-205ENST00000477069 NAT8LQ8N9F0 302 aa12.04□□□□□ -0.48
NUP188-205ENST00000477069 LPIN3Q9BQK8 851 aa12.04□□□□□ -0.48
NUP188-205ENST00000477069 C11orf84Q9BUA3 381 aaPredicted RBP12.04□□□□□ -0.48
NUP188-205ENST00000477069 C10orf88Q9H8K7 445 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms