RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-211ENST00000476994 PLEKP08567 350 aaPredicted RBP18.71■□□□□ 0.59
SREBF1-211ENST00000476994 OR4Q2P0C623 313 aa18.71■□□□□ 0.59
SREBF1-211ENST00000476994 SKILP12757 684 aa18.71■□□□□ 0.59
SREBF1-211ENST00000476994 BRD2P25440 801 aaKnown RBP18.71■□□□□ 0.59
SREBF1-211ENST00000476994 GNA15P30679 374 aa18.71■□□□□ 0.59
SREBF1-211ENST00000476994 GSDMDP57764 484 aa18.71■□□□□ 0.59
SREBF1-211ENST00000476994 CDK17Q00537 523 aa18.71■□□□□ 0.59
SREBF1-211ENST00000476994 ARID5AQ03989 594 aa18.71■□□□□ 0.59
SREBF1-211ENST00000476994 TDGQ13569 410 aa18.71■□□□□ 0.59
SREBF1-211ENST00000476994 FMNL3Q8IVF7 1028 aa18.71■□□□□ 0.59
SREBF1-211ENST00000476994 HDAC7Q8WUI4 952 aa18.71■□□□□ 0.59
SREBF1-211ENST00000476994 TNIP3Q96KP6 325 aa18.71■□□□□ 0.59
SREBF1-211ENST00000476994 OXCT2Q9BYC2 517 aaPredicted RBP18.71■□□□□ 0.59
SREBF1-211ENST00000476994 PLEKHA4Q9H4M7 779 aa18.71■□□□□ 0.59
SREBF1-211ENST00000476994 PIDD1Q9HB75 910 aa18.71■□□□□ 0.59
SREBF1-211ENST00000476994 FNIP2Q9P278 1114 aa18.71■□□□□ 0.59
SREBF1-211ENST00000476994 DOCK6Q96HP0 2047 aa18.71■□□□□ 0.59
SREBF1-211ENST00000476994 CCDC195A0A1B0GUA6 201 aa18.7■□□□□ 0.58
SREBF1-211ENST00000476994 TEX28O15482 410 aa18.7■□□□□ 0.58
SREBF1-211ENST00000476994 C1RP00736 705 aa18.7■□□□□ 0.58
SREBF1-211ENST00000476994 PDGFBP01127 241 aaPredicted RBP18.7■□□□□ 0.58
SREBF1-211ENST00000476994 SERPING1P05155 500 aa18.7■□□□□ 0.58
SREBF1-211ENST00000476994 CFHP08603 1231 aa18.7■□□□□ 0.58
SREBF1-211ENST00000476994 VDRP11473 427 aa18.7■□□□□ 0.58
SREBF1-211ENST00000476994 RPL17P18621 184 aaKnown RBP18.7■□□□□ 0.58
SREBF1-211ENST00000476994 GBP2P32456 591 aaPredicted RBP18.7■□□□□ 0.58
SREBF1-211ENST00000476994 BPIFB4P59827 614 aa18.7■□□□□ 0.58
SREBF1-211ENST00000476994 FMO1Q01740 532 aa18.7■□□□□ 0.58
SREBF1-211ENST00000476994 PTK2Q05397 1052 aa18.7■□□□□ 0.58
SREBF1-211ENST00000476994 ASTE1Q2TB18 679 aaPredicted RBP18.7■□□□□ 0.58
SREBF1-211ENST00000476994 MDH1BQ5I0G3 518 aa18.7■□□□□ 0.58
SREBF1-211ENST00000476994 ZNF571Q7Z3V5 609 aaPredicted RBP18.7■□□□□ 0.58
SREBF1-211ENST00000476994 FUKQ8N0W3 1084 aa18.7■□□□□ 0.58
SREBF1-211ENST00000476994 MYCBPAPQ8TBZ2 947 aa18.7■□□□□ 0.58
SREBF1-211ENST00000476994 ZNF606Q8WXB4 792 aa18.7■□□□□ 0.58
SREBF1-211ENST00000476994 PCED1BQ96HM7 432 aa18.7■□□□□ 0.58
SREBF1-211ENST00000476994 CHP1Q99653 195 aa18.7■□□□□ 0.58
SREBF1-211ENST00000476994 B3GNT5Q9BYG0 378 aa18.7■□□□□ 0.58
SREBF1-211ENST00000476994 HAUS4Q9H6D7 363 aa18.7■□□□□ 0.58
SREBF1-211ENST00000476994 IGSF9Q9P2J2 1179 aa18.7■□□□□ 0.58
SREBF1-211ENST00000476994 GTF3C4Q9UKN8 822 aa18.7■□□□□ 0.58
SREBF1-211ENST00000476994 FBXL21Q9UKT6 434 aa18.7■□□□□ 0.58
SREBF1-211ENST00000476994 KIAA1257Q9ULG3 409 aa18.7■□□□□ 0.58
SREBF1-211ENST00000476994 CDY1Q9Y6F8 540 aa18.7■□□□□ 0.58
SREBF1-211ENST00000476994 CACNA1HO95180 2353 aa18.7■□□□□ 0.58
SREBF1-211ENST00000476994 MYO16Q9Y6X6 1858 aa18.69■□□□□ 0.58
SREBF1-211ENST00000476994 WDR27A2RRH5 827 aa18.69■□□□□ 0.58
SREBF1-211ENST00000476994 GALR2O43603 387 aaPredicted RBP18.69■□□□□ 0.58
SREBF1-211ENST00000476994 CCDC130P13994 396 aa18.69■□□□□ 0.58
SREBF1-211ENST00000476994 PDE6CP51160 858 aa18.69■□□□□ 0.58
SREBF1-211ENST00000476994 TSPY1Q01534 308 aa18.69■□□□□ 0.58
SREBF1-211ENST00000476994 ROR1Q01973 937 aa18.69■□□□□ 0.58
SREBF1-211ENST00000476994 GPR17Q13304 367 aa18.69■□□□□ 0.58
SREBF1-211ENST00000476994 MAPK8IP2Q13387 824 aaPredicted RBP18.69■□□□□ 0.58
SREBF1-211ENST00000476994 PKDCCQ504Y2 493 aa18.69■□□□□ 0.58
SREBF1-211ENST00000476994 SGO2Q562F6 1265 aa18.69■□□□□ 0.58
SREBF1-211ENST00000476994 PPP1R26Q5T8A7 1209 aaPredicted RBP18.69■□□□□ 0.58
SREBF1-211ENST00000476994 ASTLQ6HA08 431 aaPredicted RBP18.69■□□□□ 0.58
SREBF1-211ENST00000476994 MYLPFQ96A32 169 aa18.69■□□□□ 0.58
SREBF1-211ENST00000476994 HEXIM2Q96MH2 286 aaKnown RBP18.69■□□□□ 0.58
SREBF1-211ENST00000476994 HNRNPABQ99729 332 aaKnown RBP18.69■□□□□ 0.58
SREBF1-211ENST00000476994 RHOBTB2Q9BYZ6 727 aa18.69■□□□□ 0.58
SREBF1-211ENST00000476994 FAM49BQ9NUQ9 324 aa18.69■□□□□ 0.58
SREBF1-211ENST00000476994 TMEM30AQ9NV96 361 aa18.69■□□□□ 0.58
SREBF1-211ENST00000476994 NENFQ9UMX5 172 aa18.69■□□□□ 0.58
SREBF1-211ENST00000476994 PCDHGC3Q9UN70 934 aa18.69■□□□□ 0.58
SREBF1-211ENST00000476994 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.69■□□□□ 0.58
SREBF1-211ENST00000476994 DENND4CQ5VZ89 1909 aa18.68■□□□□ 0.58
SREBF1-211ENST00000476994 GOLGA6L6A8MZA4 724 aa18.68■□□□□ 0.58
SREBF1-211ENST00000476994 THAP12O43422 761 aa18.68■□□□□ 0.58
SREBF1-211ENST00000476994 MMEP08473 750 aa18.68■□□□□ 0.58
SREBF1-211ENST00000476994 CD19P15391 556 aa18.68■□□□□ 0.58
SREBF1-211ENST00000476994 CLCN5P51795 746 aa18.68■□□□□ 0.58
SREBF1-211ENST00000476994 CDR2Q01850 454 aa18.68■□□□□ 0.58
SREBF1-211ENST00000476994 KLHL30Q0D2K2 578 aa18.68■□□□□ 0.58
SREBF1-211ENST00000476994 CNGA2Q16280 664 aa18.68■□□□□ 0.58
SREBF1-211ENST00000476994 LCLAT1Q6UWP7 414 aa18.68■□□□□ 0.58
SREBF1-211ENST00000476994 TTC30AQ86WT1 665 aa18.68■□□□□ 0.58
SREBF1-211ENST00000476994 ZNF677Q86XU0 584 aa18.68■□□□□ 0.58
SREBF1-211ENST00000476994 PALB2Q86YC2 1186 aa18.68■□□□□ 0.58
SREBF1-211ENST00000476994 SLC30A5Q8TAD4 765 aa18.68■□□□□ 0.58
SREBF1-211ENST00000476994 SMG7Q92540 1137 aaKnown RBP18.68■□□□□ 0.58
SREBF1-211ENST00000476994 CYFIP2Q96F07 1278 aa18.68■□□□□ 0.58
SREBF1-211ENST00000476994 PCDHB18PQ96TA0 734 aa18.68■□□□□ 0.58
SREBF1-211ENST00000476994 KCNK12Q9HB15 430 aa18.68■□□□□ 0.58
SREBF1-211ENST00000476994 WDR6Q9NNW5 1121 aaKnown RBP18.68■□□□□ 0.58
SREBF1-211ENST00000476994 OBSL1O75147 1896 aa18.68■□□□□ 0.58
SREBF1-211ENST00000476994 SSU72P8A0A1W2PR75 194 aa18.67■□□□□ 0.58
SREBF1-211ENST00000476994 MTMR11A4FU01 709 aa18.67■□□□□ 0.58
SREBF1-211ENST00000476994 H0Y858 1186 aa18.67■□□□□ 0.58
SREBF1-211ENST00000476994 CLDN5O00501 218 aa18.67■□□□□ 0.58
SREBF1-211ENST00000476994 ABLIM3O94929 683 aa18.67■□□□□ 0.58
SREBF1-211ENST00000476994 CCDC172P0C7W6 258 aa18.67■□□□□ 0.58
SREBF1-211ENST00000476994 OR1D2P34982 312 aa18.67■□□□□ 0.58
SREBF1-211ENST00000476994 CCZ1BP86790 482 aa18.67■□□□□ 0.58
SREBF1-211ENST00000476994 CCZ1P86791 482 aaPredicted RBP18.67■□□□□ 0.58
SREBF1-211ENST00000476994 RAB33AQ14088 237 aa18.67■□□□□ 0.58
SREBF1-211ENST00000476994 STILQ15468 1287 aa18.67■□□□□ 0.58
SREBF1-211ENST00000476994 SLC39A12Q504Y0 691 aa18.67■□□□□ 0.58
SREBF1-211ENST00000476994 TAF3Q5VWG9 929 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms