RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 MAN2A1Q16706 1144 aa7.53□□□□□ -1.2
LRCH3-215ENST00000476664 TRIM71Q2Q1W2 868 aaKnown RBP7.53□□□□□ -1.2
LRCH3-215ENST00000476664 TTC31Q49AM3 519 aaPredicted RBP7.53□□□□□ -1.2
LRCH3-215ENST00000476664 CYP27C1Q4G0S4 372 aa7.53□□□□□ -1.2
LRCH3-215ENST00000476664 CDKAL1Q5VV42 579 aa7.53□□□□□ -1.2
LRCH3-215ENST00000476664 TMPRSS7Q7RTY8 843 aa7.53□□□□□ -1.2
LRCH3-215ENST00000476664 R3HCC1LQ7Z5L2 792 aaKnown RBP7.53□□□□□ -1.2
LRCH3-215ENST00000476664 IQCA1Q86XH1 822 aa7.53□□□□□ -1.2
LRCH3-215ENST00000476664 FAM90A1Q86YD7 464 aa7.53□□□□□ -1.2
LRCH3-215ENST00000476664 DCP2Q8IU60 420 aaKnown RBP7.53□□□□□ -1.2
LRCH3-215ENST00000476664 CREG2Q8IUH2 290 aa7.53□□□□□ -1.2
LRCH3-215ENST00000476664 SLC44A2Q8IWA5 706 aaPredicted RBP7.53□□□□□ -1.2
LRCH3-215ENST00000476664 YAF2Q8IY57 180 aa7.53□□□□□ -1.2
LRCH3-215ENST00000476664 ACDQ96AP0 544 aa7.53□□□□□ -1.2
LRCH3-215ENST00000476664 AP5M1Q9H0R1 490 aa7.53□□□□□ -1.2
LRCH3-215ENST00000476664 CHST8Q9H2A9 424 aa7.53□□□□□ -1.2
LRCH3-215ENST00000476664 RNPEPQ9H4A4 650 aa7.53□□□□□ -1.2
LRCH3-215ENST00000476664 PRDM13Q9H4Q3 707 aa7.53□□□□□ -1.2
LRCH3-215ENST00000476664 A1CFQ9NQ94 594 aaKnown RBP7.53□□□□□ -1.2
LRCH3-215ENST00000476664 USP40Q9NVE5 1235 aa7.53□□□□□ -1.2
LRCH3-215ENST00000476664 KCMF1Q9P0J7 381 aa7.53□□□□□ -1.2
LRCH3-215ENST00000476664 CEP72Q9P209 647 aa7.53□□□□□ -1.2
LRCH3-215ENST00000476664 TMEM5Q9Y2B1 443 aa7.53□□□□□ -1.2
LRCH3-215ENST00000476664 ZNF711Q9Y462 761 aa7.53□□□□□ -1.2
LRCH3-215ENST00000476664 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.53□□□□□ -1.2
LRCH3-215ENST00000476664 SOS1Q07889 1333 aaPredicted RBP7.52□□□□□ -1.2
LRCH3-215ENST00000476664 SMG6Q86US8 1419 aaKnown RBP7.52□□□□□ -1.2
LRCH3-215ENST00000476664 COL5A3P25940 1745 aaPredicted RBP7.52□□□□□ -1.2
LRCH3-215ENST00000476664 A0A1W2PQ27 194 aa7.52□□□□□ -1.21
LRCH3-215ENST00000476664 A0A1W2PQ45 241 aaPredicted RBP7.52□□□□□ -1.21
LRCH3-215ENST00000476664 A0A1W2PQ64 194 aa7.52□□□□□ -1.21
LRCH3-215ENST00000476664 A0A1W2PQC6 194 aa7.52□□□□□ -1.21
LRCH3-215ENST00000476664 A0A1W2PQD8 194 aa7.52□□□□□ -1.21
LRCH3-215ENST00000476664 A0A1W2PQY0 241 aa7.52□□□□□ -1.21
LRCH3-215ENST00000476664 SPTLC2O15270 562 aa7.52□□□□□ -1.21
LRCH3-215ENST00000476664 RPS6KA4O75676 772 aa7.52□□□□□ -1.21
LRCH3-215ENST00000476664 ANXA1P04083 346 aa7.52□□□□□ -1.21
LRCH3-215ENST00000476664 CSF1P09603 554 aa7.52□□□□□ -1.21
LRCH3-215ENST00000476664 TXNP10599 105 aaKnown RBP7.52□□□□□ -1.21
LRCH3-215ENST00000476664 ELNP15502 786 aa7.52□□□□□ -1.21
LRCH3-215ENST00000476664 IL11P20809 199 aa7.52□□□□□ -1.21
LRCH3-215ENST00000476664 IL1R2P27930 398 aa7.52□□□□□ -1.21
LRCH3-215ENST00000476664 ARL3P36405 182 aa7.52□□□□□ -1.21
LRCH3-215ENST00000476664 PNLIPRP1P54315 467 aa7.52□□□□□ -1.21
LRCH3-215ENST00000476664 PER3P56645 1201 aa7.52□□□□□ -1.21
LRCH3-215ENST00000476664 HUNKP57058 714 aa7.52□□□□□ -1.21
LRCH3-215ENST00000476664 DBPQ10586 325 aaPredicted RBP7.52□□□□□ -1.21
LRCH3-215ENST00000476664 NFATC3Q12968 1075 aa7.52□□□□□ -1.21
LRCH3-215ENST00000476664 ADAM9Q13443 819 aa7.52□□□□□ -1.21
LRCH3-215ENST00000476664 MAMLD1Q13495 774 aa7.52□□□□□ -1.21
LRCH3-215ENST00000476664 NAA35Q5VZE5 725 aa7.52□□□□□ -1.21
LRCH3-215ENST00000476664 ATG16L1Q676U5 607 aa7.52□□□□□ -1.21
LRCH3-215ENST00000476664 Q7L0L9 218 aa7.52□□□□□ -1.21
LRCH3-215ENST00000476664 PRPF39Q86UA1 669 aaKnown RBP7.52□□□□□ -1.21
LRCH3-215ENST00000476664 CABP7Q86V35 215 aa7.52□□□□□ -1.21
LRCH3-215ENST00000476664 CEP57L1Q8IYX8 460 aa7.52□□□□□ -1.21
LRCH3-215ENST00000476664 USP38Q8NB14 1042 aa7.52□□□□□ -1.21
LRCH3-215ENST00000476664 RSC1A1Q92681 617 aa7.52□□□□□ -1.21
LRCH3-215ENST00000476664 RNF125Q96EQ8 232 aa7.52□□□□□ -1.21
LRCH3-215ENST00000476664 FAM46AQ96IP4 442 aaKnown RBP7.52□□□□□ -1.21
LRCH3-215ENST00000476664 FEM1CQ96JP0 617 aa7.52□□□□□ -1.21
LRCH3-215ENST00000476664 TRAPPC9Q96Q05 1148 aa7.52□□□□□ -1.21
LRCH3-215ENST00000476664 DBNDD2Q9BQY9 259 aa7.52□□□□□ -1.21
LRCH3-215ENST00000476664 AKTIPQ9H8T0 292 aa7.52□□□□□ -1.21
LRCH3-215ENST00000476664 HEYLQ9NQ87 328 aaPredicted RBP7.52□□□□□ -1.21
LRCH3-215ENST00000476664 RPS6KA6Q9UK32 745 aa7.52□□□□□ -1.21
LRCH3-215ENST00000476664 ODF2LQ9ULJ1 636 aa7.52□□□□□ -1.21
LRCH3-215ENST00000476664 SLX4Q8IY92 1834 aa7.52□□□□□ -1.21
LRCH3-215ENST00000476664 hCG_1807616A0A1W2PRN6 198 aa7.51□□□□□ -1.21
LRCH3-215ENST00000476664 CCDC78A2IDD5 438 aa7.51□□□□□ -1.21
LRCH3-215ENST00000476664 NT5C1B-RDH14C9J2C7 533 aa7.51□□□□□ -1.21
LRCH3-215ENST00000476664 NFIBO00712 420 aa7.51□□□□□ -1.21
LRCH3-215ENST00000476664 OIP5O43482 229 aa7.51□□□□□ -1.21
LRCH3-215ENST00000476664 TSPAN3O60637 253 aa7.51□□□□□ -1.21
LRCH3-215ENST00000476664 ABHD16AO95870 558 aa7.51□□□□□ -1.21
LRCH3-215ENST00000476664 AHSGP02765 367 aa7.51□□□□□ -1.21
LRCH3-215ENST00000476664 ADRB2P07550 413 aa7.51□□□□□ -1.21
LRCH3-215ENST00000476664 IL1R1P14778 569 aa7.51□□□□□ -1.21
LRCH3-215ENST00000476664 FAHP16930 419 aa7.51□□□□□ -1.21
LRCH3-215ENST00000476664 EGR1P18146 543 aa7.51□□□□□ -1.21
LRCH3-215ENST00000476664 PTGS1P23219 599 aa7.51□□□□□ -1.21
LRCH3-215ENST00000476664 ABCD1P33897 745 aa7.51□□□□□ -1.21
LRCH3-215ENST00000476664 TNNT3P45378 269 aaPredicted RBP7.51□□□□□ -1.21
LRCH3-215ENST00000476664 SLC6A9P48067 706 aa7.51□□□□□ -1.21
LRCH3-215ENST00000476664 PIK3CGP48736 1102 aa7.51□□□□□ -1.21
LRCH3-215ENST00000476664 DLG4P78352 724 aa7.51□□□□□ -1.21
LRCH3-215ENST00000476664 GRIN1Q05586 938 aa7.51□□□□□ -1.21
LRCH3-215ENST00000476664 CHAF1BQ13112 559 aa7.51□□□□□ -1.21
LRCH3-215ENST00000476664 BAK1Q16611 211 aa7.51□□□□□ -1.21
LRCH3-215ENST00000476664 SNX30Q5VWJ9 437 aa7.51□□□□□ -1.21
LRCH3-215ENST00000476664 RPUSD3Q6P087 351 aaKnown RBP7.51□□□□□ -1.21
LRCH3-215ENST00000476664 OGFOD3Q6PK18 319 aa7.51□□□□□ -1.21
LRCH3-215ENST00000476664 BMP8AQ7Z5Y6 402 aa7.51□□□□□ -1.21
LRCH3-215ENST00000476664 ANKS1BQ7Z6G8 1248 aa7.51□□□□□ -1.21
LRCH3-215ENST00000476664 TOR1AIP2Q8NFQ8 470 aa7.51□□□□□ -1.21
LRCH3-215ENST00000476664 TNPO1Q92973 898 aaKnown RBP7.51□□□□□ -1.21
LRCH3-215ENST00000476664 TBC1D31Q96DN5 1066 aa7.51□□□□□ -1.21
LRCH3-215ENST00000476664 JMJD8Q96S16 334 aa7.51□□□□□ -1.21
LRCH3-215ENST00000476664 MYCBPQ99417 103 aaPredicted RBP7.51□□□□□ -1.21
LRCH3-215ENST00000476664 SEMA6BQ9H3T3 888 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms