RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 NRLP54845 237 aa11.5□□□□□ -0.57
SEC13-214ENST00000476597 MCCD1P59942 119 aaPredicted RBP11.5□□□□□ -0.57
SEC13-214ENST00000476597 NOP14P78316 857 aaKnown RBP11.5□□□□□ -0.57
SEC13-214ENST00000476597 CCINQ13939 588 aa11.5□□□□□ -0.57
SEC13-214ENST00000476597 PPP2R5DQ14738 602 aa11.5□□□□□ -0.57
SEC13-214ENST00000476597 MTF1Q14872 753 aa11.5□□□□□ -0.57
SEC13-214ENST00000476597 PDGFRLQ15198 375 aa11.5□□□□□ -0.57
SEC13-214ENST00000476597 ZNF77Q15935 545 aa11.5□□□□□ -0.57
SEC13-214ENST00000476597 ZNF699Q32M78 642 aa11.5□□□□□ -0.57
SEC13-214ENST00000476597 ZNF667Q5HYK9 610 aa11.5□□□□□ -0.57
SEC13-214ENST00000476597 CEP135Q66GS9 1140 aa11.5□□□□□ -0.57
SEC13-214ENST00000476597 SV2AQ7L0J3 742 aa11.5□□□□□ -0.57
SEC13-214ENST00000476597 GUF1Q8N442 669 aaKnown RBP11.5□□□□□ -0.57
SEC13-214ENST00000476597 ARL14EPQ8N8R7 260 aaPredicted RBP11.5□□□□□ -0.57
SEC13-214ENST00000476597 B3GALNT2Q8NCR0 500 aa11.5□□□□□ -0.57
SEC13-214ENST00000476597 RUBCNQ92622 972 aa11.5□□□□□ -0.57
SEC13-214ENST00000476597 CHFRQ96EP1 664 aa11.5□□□□□ -0.57
SEC13-214ENST00000476597 B3GNT5Q9BYG0 378 aa11.5□□□□□ -0.57
SEC13-214ENST00000476597 ZNF518BQ9C0D4 1074 aa11.5□□□□□ -0.57
SEC13-214ENST00000476597 ELOVL4Q9GZR5 314 aa11.5□□□□□ -0.57
SEC13-214ENST00000476597 EBF3Q9H4W6 596 aa11.5□□□□□ -0.57
SEC13-214ENST00000476597 SMYD3Q9H7B4 428 aa11.5□□□□□ -0.57
SEC13-214ENST00000476597 GDPD2Q9HCC8 539 aa11.5□□□□□ -0.57
SEC13-214ENST00000476597 TMEM30AQ9NV96 361 aa11.5□□□□□ -0.57
SEC13-214ENST00000476597 TRPM5Q9NZQ8 1165 aa11.5□□□□□ -0.57
SEC13-214ENST00000476597 FRMD4BQ9Y2L6 1034 aa11.5□□□□□ -0.57
SEC13-214ENST00000476597 ZNF840PA6NDX5 716 aa11.49□□□□□ -0.57
SEC13-214ENST00000476597 CLDN5O00501 218 aa11.49□□□□□ -0.57
SEC13-214ENST00000476597 AKAP3O75969 853 aa11.49□□□□□ -0.57
SEC13-214ENST00000476597 CKMP06732 381 aa11.49□□□□□ -0.57
SEC13-214ENST00000476597 ARSAP15289 507 aa11.49□□□□□ -0.57
SEC13-214ENST00000476597 GALK1P51570 392 aa11.49□□□□□ -0.57
SEC13-214ENST00000476597 AMPD2Q01433 879 aa11.49□□□□□ -0.57
SEC13-214ENST00000476597 SATB1Q01826 763 aa11.49□□□□□ -0.57
SEC13-214ENST00000476597 ADAM9Q13443 819 aa11.49□□□□□ -0.57
SEC13-214ENST00000476597 TMEM196Q5HYL7 178 aa11.49□□□□□ -0.57
SEC13-214ENST00000476597 Q6ZS52 159 aa11.49□□□□□ -0.57
SEC13-214ENST00000476597 PAQR9Q6ZVX9 377 aa11.49□□□□□ -0.57
SEC13-214ENST00000476597 CRYBG2Q8N1P7 616 aa11.49□□□□□ -0.57
SEC13-214ENST00000476597 DCLK2Q8N568 766 aa11.49□□□□□ -0.57
SEC13-214ENST00000476597 OSCP1Q8WVF1 389 aa11.49□□□□□ -0.57
SEC13-214ENST00000476597 TAF4BQ92750 862 aa11.49□□□□□ -0.57
SEC13-214ENST00000476597 ELMO3Q96BJ8 720 aa11.49□□□□□ -0.57
SEC13-214ENST00000476597 TNIP3Q96KP6 325 aa11.49□□□□□ -0.57
SEC13-214ENST00000476597 SDCBP2Q9H190 292 aa11.49□□□□□ -0.57
SEC13-214ENST00000476597 EPC1Q9H2F5 836 aa11.49□□□□□ -0.57
SEC13-214ENST00000476597 ECT2Q9H8V3 914 aa11.49□□□□□ -0.57
SEC13-214ENST00000476597 DUS2Q9NX74 493 aaKnown RBP11.49□□□□□ -0.57
SEC13-214ENST00000476597 ARHGAP26Q9UNA1 814 aa11.49□□□□□ -0.57
SEC13-214ENST00000476597 MAPK8IP1Q9UQF2 711 aa11.49□□□□□ -0.57
SEC13-214ENST00000476597 DNAH14Q0VDD8 3507 aa11.49□□□□□ -0.57
SEC13-214ENST00000476597 K7ESF4 209 aa11.48□□□□□ -0.57
SEC13-214ENST00000476597 ASS1P00966 412 aaKnown RBP11.48□□□□□ -0.57
SEC13-214ENST00000476597 P4HA1P13674 534 aa11.48□□□□□ -0.57
SEC13-214ENST00000476597 NR2F2P24468 414 aa11.48□□□□□ -0.57
SEC13-214ENST00000476597 RPL13P26373 211 aaKnown RBP11.48□□□□□ -0.57
SEC13-214ENST00000476597 GJA4P35212 333 aa11.48□□□□□ -0.57
SEC13-214ENST00000476597 RAP1GAPP47736 663 aa11.48□□□□□ -0.57
SEC13-214ENST00000476597 PDE6CP51160 858 aa11.48□□□□□ -0.57
SEC13-214ENST00000476597 VAMP7P51809 220 aa11.48□□□□□ -0.57
SEC13-214ENST00000476597 SLC7A9P82251 487 aa11.48□□□□□ -0.57
SEC13-214ENST00000476597 ZXDBP98169 803 aa11.48□□□□□ -0.57
SEC13-214ENST00000476597 ENPEPQ07075 957 aa11.48□□□□□ -0.57
SEC13-214ENST00000476597 TAF10Q12962 218 aa11.48□□□□□ -0.57
SEC13-214ENST00000476597 USP4Q13107 963 aa11.48□□□□□ -0.57
SEC13-214ENST00000476597 BECN1Q14457 450 aa11.48□□□□□ -0.57
SEC13-214ENST00000476597 EML3Q32P44 896 aa11.48□□□□□ -0.57
SEC13-214ENST00000476597 ZCWPW2Q504Y3 356 aa11.48□□□□□ -0.57
SEC13-214ENST00000476597 FSTL4Q6MZW2 842 aa11.48□□□□□ -0.57
SEC13-214ENST00000476597 INTS8Q75QN2 995 aaKnown RBP11.48□□□□□ -0.57
SEC13-214ENST00000476597 FMR1NBQ8N0W7 255 aaPredicted RBP11.48□□□□□ -0.57
SEC13-214ENST00000476597 NUP93Q8N1F7 819 aa11.48□□□□□ -0.57
SEC13-214ENST00000476597 SH3RF2Q8TEC5 729 aa11.48□□□□□ -0.57
SEC13-214ENST00000476597 KCNK16Q96T55 309 aa11.48□□□□□ -0.57
SEC13-214ENST00000476597 RNF38Q9H0F5 515 aa11.48□□□□□ -0.57
SEC13-214ENST00000476597 LINC00597Q9H2U6 94 aa11.48□□□□□ -0.57
SEC13-214ENST00000476597 FBRSL1Q9HCM7 1045 aaKnown RBP11.48□□□□□ -0.57
SEC13-214ENST00000476597 C2orf42Q9NWW7 574 aa11.48□□□□□ -0.57
SEC13-214ENST00000476597 IL37Q9NZH6 218 aa11.48□□□□□ -0.57
SEC13-214ENST00000476597 COL4A2P08572 1712 aa11.48□□□□□ -0.57
SEC13-214ENST00000476597 DCHS1Q96JQ0 3298 aa11.47□□□□□ -0.57
SEC13-214ENST00000476597 LEFTY2O00292 366 aa11.47□□□□□ -0.57
SEC13-214ENST00000476597 TNFRSF10BO14763 440 aa11.47□□□□□ -0.57
SEC13-214ENST00000476597 RTN3O95197 1032 aaPredicted RBP11.47□□□□□ -0.57
SEC13-214ENST00000476597 OLFM2O95897 454 aa11.47□□□□□ -0.57
SEC13-214ENST00000476597 HLA-DRAP01903 254 aa11.47□□□□□ -0.57
SEC13-214ENST00000476597 YWHAQP27348 245 aa11.47□□□□□ -0.57
SEC13-214ENST00000476597 HOXA6P31267 233 aa11.47□□□□□ -0.57
SEC13-214ENST00000476597 PSMC2P35998 433 aaKnown RBP11.47□□□□□ -0.57
SEC13-214ENST00000476597 ASPAP45381 313 aa11.47□□□□□ -0.57
SEC13-214ENST00000476597 IFNAR2P48551 515 aa11.47□□□□□ -0.57
SEC13-214ENST00000476597 NDST1P52848 882 aa11.47□□□□□ -0.57
SEC13-214ENST00000476597 NUCB2P80303 420 aa11.47□□□□□ -0.57
SEC13-214ENST00000476597 GRSF1Q12849 480 aaKnown RBP eCLIP11.47□□□□□ -0.57
SEC13-214ENST00000476597 SPOPLQ6IQ16 392 aa11.47□□□□□ -0.57
SEC13-214ENST00000476597 SCARA5Q6ZMJ2 495 aa11.47□□□□□ -0.57
SEC13-214ENST00000476597 UNC93AQ86WB7 457 aa11.47□□□□□ -0.57
SEC13-214ENST00000476597 FAM186BQ8IYM0 893 aa11.47□□□□□ -0.57
SEC13-214ENST00000476597 CPA6Q8N4T0 437 aa11.47□□□□□ -0.57
SEC13-214ENST00000476597 KIAA1958Q8N8K9 716 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms