RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 KCNT1Q5JUK3 1230 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 CCNJQ5T5M9 372 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 DCLRE1AQ6PJP8 1040 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 IZUMO2Q6UXV1 221 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 FAM47EQ6ZV65 393 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 STOX1Q6ZVD7 989 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 ATG9AQ7Z3C6 839 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 PRUNE1Q86TP1 453 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 ZNF677Q86XU0 584 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 NOSTRINQ8IVI9 506 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 KBTBD2Q8IY47 623 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 CCNYL1Q8N7R7 359 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 NECAB1Q8N987 351 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 ZFP28Q8NHY6 868 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 ACTRT2Q8TDY3 377 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 PPP4R1Q8TF05 950 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 TRIM63Q969Q1 353 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 DACT3Q96B18 629 aaPredicted RBP4.33□□□□□ -1.72
CD55-208ENST00000476590 TNIP3Q96KP6 325 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 HINFPQ9BQA5 517 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 PHF20Q9BVI0 1012 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 TBC1D10AQ9BXI6 508 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 MRPS26Q9BYN8 205 aaKnown RBP4.33□□□□□ -1.72
CD55-208ENST00000476590 KLHL25Q9H0H3 589 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 DDX47Q9H0S4 455 aaKnown RBP4.33□□□□□ -1.72
CD55-208ENST00000476590 LIN7BQ9HAP6 207 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 EPB41L5Q9HCM4 733 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 S100A14Q9HCY8 104 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 INTS9Q9NV88 658 aaKnown RBP4.33□□□□□ -1.72
CD55-208ENST00000476590 UCKL1Q9NWZ5 548 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 GPRC5DQ9NZD1 345 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 KLHL14Q9P2G3 628 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 MBD2Q9UBB5 411 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 PRKAG3Q9UGI9 489 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 SLC7A8Q9UHI5 535 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 DPP7Q9UHL4 492 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 SNX12Q9UMY4 172 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 ARHGAP26Q9UNA1 814 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 STARD13Q9Y3M8 1113 aa4.33□□□□□ -1.72
CD55-208ENST00000476590 UGGT1Q9NYU2 1555 aa4.32□□□□□ -1.72
CD55-208ENST00000476590 A0A1W2PP64 1363 aa4.32□□□□□ -1.72
CD55-208ENST00000476590 KLRG2A4D1S0 409 aaPredicted RBP4.32□□□□□ -1.72
CD55-208ENST00000476590 ZBBXA8MT70 800 aa4.32□□□□□ -1.72
CD55-208ENST00000476590 CCRL2O00421 344 aa4.32□□□□□ -1.72
CD55-208ENST00000476590 BET1O15155 118 aa4.32□□□□□ -1.72
CD55-208ENST00000476590 TBX10O75333 385 aa4.32□□□□□ -1.72
CD55-208ENST00000476590 SULT1C4O75897 302 aa4.32□□□□□ -1.72
CD55-208ENST00000476590 HEXIM1O94992 359 aaKnown RBP4.32□□□□□ -1.72
CD55-208ENST00000476590 IFNA14P01570 189 aa4.32□□□□□ -1.72
CD55-208ENST00000476590 KRT10P13645 584 aa4.32□□□□□ -1.72
CD55-208ENST00000476590 KRT13P13646 458 aa4.32□□□□□ -1.72
CD55-208ENST00000476590 GNA15P30679 374 aa4.32□□□□□ -1.72
CD55-208ENST00000476590 PPP1R2P41236 205 aa4.32□□□□□ -1.72
CD55-208ENST00000476590 CHN2P52757 468 aa4.32□□□□□ -1.72
CD55-208ENST00000476590 VCPP55072 806 aaKnown RBP4.32□□□□□ -1.72
CD55-208ENST00000476590 C21orf59P57076 290 aa4.32□□□□□ -1.72
CD55-208ENST00000476590 STX1BP61266 288 aa4.32□□□□□ -1.72
CD55-208ENST00000476590 ERVK-24P63145 666 aa4.32□□□□□ -1.72
CD55-208ENST00000476590 PRAMEP78395 509 aa4.32□□□□□ -1.72
CD55-208ENST00000476590 RHAGQ02094 409 aa4.32□□□□□ -1.72
CD55-208ENST00000476590 PTPN12Q05209 780 aaKnown RBP4.32□□□□□ -1.72
CD55-208ENST00000476590 ZNF33BQ06732 778 aa4.32□□□□□ -1.72
CD55-208ENST00000476590 ENPEPQ07075 957 aa4.32□□□□□ -1.72
CD55-208ENST00000476590 AIMP1Q12904 312 aaKnown RBP4.32□□□□□ -1.72
CD55-208ENST00000476590 TRIM14Q14142 442 aa4.32□□□□□ -1.72
CD55-208ENST00000476590 NADK2Q4G0N4 442 aa4.32□□□□□ -1.72
CD55-208ENST00000476590 SLX4IPQ5VYV7 408 aa4.32□□□□□ -1.72
CD55-208ENST00000476590 IQSEC1Q6DN90 963 aa4.32□□□□□ -1.72
CD55-208ENST00000476590 PPP1R2P3Q6NXS1 205 aa4.32□□□□□ -1.72
CD55-208ENST00000476590 ELMSAN1Q6PJG2 1045 aa4.32□□□□□ -1.72
CD55-208ENST00000476590 TMC5Q6UXY8 1006 aa4.32□□□□□ -1.72
CD55-208ENST00000476590 LHFPL2Q6ZUX7 228 aa4.32□□□□□ -1.72
CD55-208ENST00000476590 VSIG1Q86XK7 387 aa4.32□□□□□ -1.72
CD55-208ENST00000476590 RNF135Q8IUD6 432 aa4.32□□□□□ -1.72
CD55-208ENST00000476590 KIAA2013Q8IYS2 634 aa4.32□□□□□ -1.72
CD55-208ENST00000476590 REXO1Q8N1G1 1221 aaKnown RBP4.32□□□□□ -1.72
CD55-208ENST00000476590 TTC13Q8NBP0 860 aa4.32□□□□□ -1.72
CD55-208ENST00000476590 CAPSLQ8WWF8 208 aa4.32□□□□□ -1.72
CD55-208ENST00000476590 PLEKHA8Q96JA3 519 aa4.32□□□□□ -1.72
CD55-208ENST00000476590 BTBD6Q96KE9 485 aa4.32□□□□□ -1.72
CD55-208ENST00000476590 COG8Q96MW5 612 aa4.32□□□□□ -1.72
CD55-208ENST00000476590 USB1Q9BQ65 265 aaKnown RBP4.32□□□□□ -1.72
CD55-208ENST00000476590 FERMT1Q9BQL6 677 aa4.32□□□□□ -1.72
CD55-208ENST00000476590 RHOBTB2Q9BYZ6 727 aa4.32□□□□□ -1.72
CD55-208ENST00000476590 TRIM8Q9BZR9 551 aa4.32□□□□□ -1.72
CD55-208ENST00000476590 PITHD1Q9GZP4 211 aaPredicted RBP4.32□□□□□ -1.72
CD55-208ENST00000476590 VPS37BQ9H9H4 285 aa4.32□□□□□ -1.72
CD55-208ENST00000476590 ZFYVE28Q9HCC9 887 aa4.32□□□□□ -1.72
CD55-208ENST00000476590 SYTL2Q9HCH5 934 aa4.32□□□□□ -1.72
CD55-208ENST00000476590 HPS4Q9NQG7 708 aa4.32□□□□□ -1.72
CD55-208ENST00000476590 DNAJB4Q9UDY4 337 aa4.32□□□□□ -1.72
CD55-208ENST00000476590 POU2F3Q9UKI9 436 aa4.32□□□□□ -1.72
CD55-208ENST00000476590 EPN1Q9Y6I3 576 aaPredicted RBP4.32□□□□□ -1.72
CD55-208ENST00000476590 DNMT1P26358 1616 aaKnown RBP4.32□□□□□ -1.72
CD55-208ENST00000476590 ATP10DQ9P241 1426 aa4.32□□□□□ -1.72
CD55-208ENST00000476590 AOX1Q06278 1338 aa4.32□□□□□ -1.72
CD55-208ENST00000476590 A0A087WZG4 1122 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 hCG_1642624A0A1W2PR95 340 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 ARHGEF35A5YM69 484 aa4.31□□□□□ -1.72
CD55-208ENST00000476590 A8MXQ7 604 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms