RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 HMGB4Q8WW32 186 aa17.64■□□□□ 0.41
APOBEC3F-203ENST00000476513 GTPBP2Q9BX10 602 aaKnown RBP17.64■□□□□ 0.41
APOBEC3F-203ENST00000476513 ZHX3Q9H4I2 956 aa17.64■□□□□ 0.41
APOBEC3F-203ENST00000476513 POLMQ9NP87 494 aaPredicted RBP17.64■□□□□ 0.41
APOBEC3F-203ENST00000476513 SLC6A14Q9UN76 642 aa17.64■□□□□ 0.41
APOBEC3F-203ENST00000476513 AGAP1Q9UPQ3 857 aa17.64■□□□□ 0.41
APOBEC3F-203ENST00000476513 GPSM3Q9Y4H4 160 aa17.64■□□□□ 0.41
APOBEC3F-203ENST00000476513 PTPRDP23468 1912 aa17.64■□□□□ 0.41
APOBEC3F-203ENST00000476513 DSPP15924 2871 aaKnown RBP17.64■□□□□ 0.41
APOBEC3F-203ENST00000476513 HCRTO43612 131 aa17.63■□□□□ 0.41
APOBEC3F-203ENST00000476513 IL18RAPO95256 599 aa17.63■□□□□ 0.41
APOBEC3F-203ENST00000476513 ABCD1P33897 745 aa17.63■□□□□ 0.41
APOBEC3F-203ENST00000476513 HOXD12P35452 270 aa17.63■□□□□ 0.41
APOBEC3F-203ENST00000476513 KIR2DL1P43626 348 aaPredicted RBP17.63■□□□□ 0.41
APOBEC3F-203ENST00000476513 WNT7BP56706 349 aa17.63■□□□□ 0.41
APOBEC3F-203ENST00000476513 BYSLQ13895 437 aaKnown RBP17.63■□□□□ 0.41
APOBEC3F-203ENST00000476513 DHCR24Q15392 516 aa17.63■□□□□ 0.41
APOBEC3F-203ENST00000476513 EOGTQ5NDL2 527 aa17.63■□□□□ 0.41
APOBEC3F-203ENST00000476513 SCARA3Q6AZY7 606 aa17.63■□□□□ 0.41
APOBEC3F-203ENST00000476513 C19orf48Q6RUI8 117 aa17.63■□□□□ 0.41
APOBEC3F-203ENST00000476513 RAB44Q7Z6P3 723 aaPredicted RBP17.63■□□□□ 0.41
APOBEC3F-203ENST00000476513 FILIP1Q7Z7B0 1213 aa17.63■□□□□ 0.41
APOBEC3F-203ENST00000476513 FUBP3Q96I24 572 aaKnown RBP eCLIP17.63■□□□□ 0.41
APOBEC3F-203ENST00000476513 PNKPQ96T60 521 aa17.63■□□□□ 0.41
APOBEC3F-203ENST00000476513 ZDHHC4Q9NPG8 344 aa17.63■□□□□ 0.41
APOBEC3F-203ENST00000476513 BLOC1S4Q9NUP1 217 aa17.63■□□□□ 0.41
APOBEC3F-203ENST00000476513 WDFY3Q8IZQ1 3526 aa17.63■□□□□ 0.41
APOBEC3F-203ENST00000476513 TCRBV21S2A2A0A5A6 115 aa17.62■□□□□ 0.41
APOBEC3F-203ENST00000476513 OPHN1O60890 802 aa17.62■□□□□ 0.41
APOBEC3F-203ENST00000476513 ADAM23O75077 832 aa17.62■□□□□ 0.41
APOBEC3F-203ENST00000476513 KAT7O95251 611 aa17.62■□□□□ 0.41
APOBEC3F-203ENST00000476513 APODP05090 189 aa17.62■□□□□ 0.41
APOBEC3F-203ENST00000476513 ITGB3P05106 788 aa17.62■□□□□ 0.41
APOBEC3F-203ENST00000476513 SERPINF2P08697 491 aa17.62■□□□□ 0.41
APOBEC3F-203ENST00000476513 ADSSP30520 456 aa17.62■□□□□ 0.41
APOBEC3F-203ENST00000476513 MAGEA11P43364 429 aa17.62■□□□□ 0.41
APOBEC3F-203ENST00000476513 PDE6CP51160 858 aa17.62■□□□□ 0.41
APOBEC3F-203ENST00000476513 TFAMQ00059 246 aaKnown RBP17.62■□□□□ 0.41
APOBEC3F-203ENST00000476513 GFPT1Q06210 699 aaPredicted RBP17.62■□□□□ 0.41
APOBEC3F-203ENST00000476513 MCM6Q14566 821 aa17.62■□□□□ 0.41
APOBEC3F-203ENST00000476513 DUOXA1Q1HG43 343 aa17.62■□□□□ 0.41
APOBEC3F-203ENST00000476513 ZNF423Q2M1K9 1284 aa17.62■□□□□ 0.41
APOBEC3F-203ENST00000476513 SOWAHCQ53LP3 525 aaPredicted RBP17.62■□□□□ 0.41
APOBEC3F-203ENST00000476513 RILPL1Q5EBL4 403 aa17.62■□□□□ 0.41
APOBEC3F-203ENST00000476513 C12orf40Q86WS4 652 aa17.62■□□□□ 0.41
APOBEC3F-203ENST00000476513 C1orf127Q8N9H9 656 aa17.62■□□□□ 0.41
APOBEC3F-203ENST00000476513 CEP76Q8TAP6 659 aa17.62■□□□□ 0.41
APOBEC3F-203ENST00000476513 POMGNT1Q8WZA1 660 aa17.62■□□□□ 0.41
APOBEC3F-203ENST00000476513 CAPN10Q9HC96 672 aa17.62■□□□□ 0.41
APOBEC3F-203ENST00000476513 TNRC6BQ9UPQ9 1833 aaKnown RBP17.62■□□□□ 0.41
APOBEC3F-203ENST00000476513 TCHHQ07283 1943 aa17.62■□□□□ 0.41
APOBEC3F-203ENST00000476513 DMXL2Q8TDJ6 3036 aa17.62■□□□□ 0.41
APOBEC3F-203ENST00000476513 A0A0A0MRY4 1105 aa17.61■□□□□ 0.41
APOBEC3F-203ENST00000476513 GABRDO14764 452 aa17.61■□□□□ 0.41
APOBEC3F-203ENST00000476513 SCAMP3O14828 347 aaKnown RBP17.61■□□□□ 0.41
APOBEC3F-203ENST00000476513 TBCAO75347 108 aaKnown RBP17.61■□□□□ 0.41
APOBEC3F-203ENST00000476513 KRT18P05783 430 aaKnown RBP17.61■□□□□ 0.41
APOBEC3F-203ENST00000476513 CD59P13987 128 aa17.61■□□□□ 0.41
APOBEC3F-203ENST00000476513 PFKLP17858 780 aa17.61■□□□□ 0.41
APOBEC3F-203ENST00000476513 EIF2DP41214 584 aaKnown RBP17.61■□□□□ 0.41
APOBEC3F-203ENST00000476513 SCAPQ12770 1279 aa17.61■□□□□ 0.41
APOBEC3F-203ENST00000476513 ARL6IP4Q66PJ3 421 aaKnown RBP17.61■□□□□ 0.41
APOBEC3F-203ENST00000476513 FAM171BQ6P995 826 aa17.61■□□□□ 0.41
APOBEC3F-203ENST00000476513 RHBDF2Q6PJF5 856 aa17.61■□□□□ 0.41
APOBEC3F-203ENST00000476513 ADGRF2Q8IZF7 708 aa17.61■□□□□ 0.41
APOBEC3F-203ENST00000476513 PGBD3Q8N328 593 aa17.61■□□□□ 0.41
APOBEC3F-203ENST00000476513 DEFB119Q8N690 84 aa17.61■□□□□ 0.41
APOBEC3F-203ENST00000476513 KIAA1958Q8N8K9 716 aa17.61■□□□□ 0.41
APOBEC3F-203ENST00000476513 OR2I1PQ8NGU4 316 aa17.61■□□□□ 0.41
APOBEC3F-203ENST00000476513 CXorf38Q8TB03 319 aa17.61■□□□□ 0.41
APOBEC3F-203ENST00000476513 FAM84AQ96KN4 292 aa17.61■□□□□ 0.41
APOBEC3F-203ENST00000476513 SPATA17Q96L03 361 aa17.61■□□□□ 0.41
APOBEC3F-203ENST00000476513 RNF38Q9H0F5 515 aa17.61■□□□□ 0.41
APOBEC3F-203ENST00000476513 ST6GALNAC4Q9H4F1 302 aa17.61■□□□□ 0.41
APOBEC3F-203ENST00000476513 GDAP2Q9NXN4 497 aa17.61■□□□□ 0.41
APOBEC3F-203ENST00000476513 TRPM5Q9NZQ8 1165 aa17.61■□□□□ 0.41
APOBEC3F-203ENST00000476513 SNX9Q9Y5X1 595 aa17.61■□□□□ 0.41
APOBEC3F-203ENST00000476513 PI4KAP42356 2102 aa17.6■□□□□ 0.41
APOBEC3F-203ENST00000476513 TULP1O00294 542 aaPredicted RBP17.6■□□□□ 0.41
APOBEC3F-203ENST00000476513 AP5Z1O43299 807 aa17.6■□□□□ 0.41
APOBEC3F-203ENST00000476513 SLC26A4O43511 780 aa17.6■□□□□ 0.41
APOBEC3F-203ENST00000476513 ATP2C2O75185 946 aa17.6■□□□□ 0.41
APOBEC3F-203ENST00000476513 PLCG1P19174 1290 aa17.6■□□□□ 0.41
APOBEC3F-203ENST00000476513 PCSK1P29120 753 aa17.6■□□□□ 0.41
APOBEC3F-203ENST00000476513 GRIA2P42262 883 aa17.6■□□□□ 0.41
APOBEC3F-203ENST00000476513 LHX1P48742 406 aa17.6■□□□□ 0.41
APOBEC3F-203ENST00000476513 USP46P62068 366 aa17.6■□□□□ 0.41
APOBEC3F-203ENST00000476513 SLC7A9P82251 487 aa17.6■□□□□ 0.41
APOBEC3F-203ENST00000476513 RPL6Q02878 288 aaKnown RBP17.6■□□□□ 0.41
APOBEC3F-203ENST00000476513 RESTQ13127 1097 aa17.6■□□□□ 0.41
APOBEC3F-203ENST00000476513 PDZD3Q86UT5 571 aa17.6■□□□□ 0.41
APOBEC3F-203ENST00000476513 MINDY1Q8N5J2 469 aa17.6■□□□□ 0.41
APOBEC3F-203ENST00000476513 LRRC52Q8N7C0 313 aa17.6■□□□□ 0.41
APOBEC3F-203ENST00000476513 CALML4Q96GE6 196 aa17.6■□□□□ 0.41
APOBEC3F-203ENST00000476513 ZSCAN31Q96LW9 406 aaPredicted RBP17.6■□□□□ 0.41
APOBEC3F-203ENST00000476513 ARHGEF4Q9NR80 690 aa17.6■□□□□ 0.41
APOBEC3F-203ENST00000476513 SMPD4Q9NXE4 827 aa17.6■□□□□ 0.41
APOBEC3F-203ENST00000476513 CPQQ9Y646 472 aa17.6■□□□□ 0.41
APOBEC3F-203ENST00000476513 ANAPC1Q9H1A4 1944 aa17.6■□□□□ 0.41
APOBEC3F-203ENST00000476513 ZNF840PA6NDX5 716 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms