RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 CALN1Q9BXU9 219 aa17.46■□□□□ 0.39
TVP23B-202ENST00000476139 FAM49BQ9NUQ9 324 aa17.46■□□□□ 0.39
TVP23B-202ENST00000476139 WDR35Q9P2L0 1181 aa17.46■□□□□ 0.39
TVP23B-202ENST00000476139 NAALADL1Q9UQQ1 740 aa17.46■□□□□ 0.39
TVP23B-202ENST00000476139 ATXN2Q99700 1313 aaKnown RBP17.46■□□□□ 0.39
TVP23B-202ENST00000476139 ITGAVP06756 1048 aa17.46■□□□□ 0.39
TVP23B-202ENST00000476139 SCTRP47872 440 aa17.46■□□□□ 0.39
TVP23B-202ENST00000476139 INCA1Q0VD86 236 aa17.46■□□□□ 0.39
TVP23B-202ENST00000476139 MPP2Q14168 576 aa17.46■□□□□ 0.39
TVP23B-202ENST00000476139 CCDC197Q8NCU1 140 aa17.46■□□□□ 0.39
TVP23B-202ENST00000476139 TUBGCP4Q9UGJ1 667 aa17.46■□□□□ 0.39
TVP23B-202ENST00000476139 GJD2Q9UKL4 321 aa17.46■□□□□ 0.39
TVP23B-202ENST00000476139 PLXNB2O15031 1838 aa17.46■□□□□ 0.38
TVP23B-202ENST00000476139 GPR32O75388 356 aa17.46■□□□□ 0.38
TVP23B-202ENST00000476139 AKAP5P24588 427 aa17.46■□□□□ 0.38
TVP23B-202ENST00000476139 OR6B2Q6IFH4 312 aa17.46■□□□□ 0.38
TVP23B-202ENST00000476139 PMF1Q6P1K2 205 aa17.46■□□□□ 0.38
TVP23B-202ENST00000476139 TAOK1Q7L7X3 1001 aa17.46■□□□□ 0.38
TVP23B-202ENST00000476139 ANKRD23Q86SG2 305 aa17.46■□□□□ 0.38
TVP23B-202ENST00000476139 MRRFQ96E11 262 aaKnown RBP17.46■□□□□ 0.38
TVP23B-202ENST00000476139 FAXDC2Q96IV6 333 aa17.46■□□□□ 0.38
TVP23B-202ENST00000476139 APOL6Q9BWW8 343 aa17.46■□□□□ 0.38
TVP23B-202ENST00000476139 NT5C1AQ9BXI3 368 aa17.46■□□□□ 0.38
TVP23B-202ENST00000476139 STMN4Q9H169 189 aaPredicted RBP17.46■□□□□ 0.38
TVP23B-202ENST00000476139 TMEM120BA0PK00 339 aa17.45■□□□□ 0.38
TVP23B-202ENST00000476139 RNF8O76064 485 aa17.45■□□□□ 0.38
TVP23B-202ENST00000476139 GRM5P41594 1212 aa17.45■□□□□ 0.38
TVP23B-202ENST00000476139 FAM133BQ5BKY9 247 aaKnown RBP17.45■□□□□ 0.38
TVP23B-202ENST00000476139 RNASEH2BQ5TBB1 312 aaKnown RBP17.45■□□□□ 0.38
TVP23B-202ENST00000476139 VSTM1Q6UX27 236 aa17.45■□□□□ 0.38
TVP23B-202ENST00000476139 FAM183BPQ6ZVS7 135 aa17.45■□□□□ 0.38
TVP23B-202ENST00000476139 CATSPER4Q7RTX7 472 aa17.45■□□□□ 0.38
TVP23B-202ENST00000476139 PLEKHH3Q7Z736 793 aa17.45■□□□□ 0.38
TVP23B-202ENST00000476139 SCUBE3Q8IX30 993 aa17.45■□□□□ 0.38
TVP23B-202ENST00000476139 PLCD3Q8N3E9 789 aa17.45■□□□□ 0.38
TVP23B-202ENST00000476139 SLC45A1Q9Y2W3 748 aa17.45■□□□□ 0.38
TVP23B-202ENST00000476139 TRUB2O95900 331 aaKnown RBP17.45■□□□□ 0.38
TVP23B-202ENST00000476139 PDGFRAP16234 1089 aa17.45■□□□□ 0.38
TVP23B-202ENST00000476139 ATP11AP98196 1134 aa17.45■□□□□ 0.38
TVP23B-202ENST00000476139 GPR162Q16538 588 aa17.45■□□□□ 0.38
TVP23B-202ENST00000476139 CMASQ8NFW8 434 aaPredicted RBP17.45■□□□□ 0.38
TVP23B-202ENST00000476139 RXFP2Q8WXD0 754 aa17.45■□□□□ 0.38
TVP23B-202ENST00000476139 CCT6BQ92526 530 aa17.45■□□□□ 0.38
TVP23B-202ENST00000476139 CFAP57Q96MR6 1250 aa17.45■□□□□ 0.38
TVP23B-202ENST00000476139 KLC4Q9NSK0 619 aa17.45■□□□□ 0.38
TVP23B-202ENST00000476139 CPA4Q9UI42 421 aa17.45■□□□□ 0.38
TVP23B-202ENST00000476139 PIAS1O75925 651 aa17.44■□□□□ 0.38
TVP23B-202ENST00000476139 ZKSCAN8Q15776 578 aaPredicted RBP17.44■□□□□ 0.38
TVP23B-202ENST00000476139 LCLAT1Q6UWP7 414 aa17.44■□□□□ 0.38
TVP23B-202ENST00000476139 ZNF410Q86VK4 478 aa17.44■□□□□ 0.38
TVP23B-202ENST00000476139 RFX6Q8HWS3 928 aa17.44■□□□□ 0.38
TVP23B-202ENST00000476139 RELL1Q8IUW5 271 aa17.44■□□□□ 0.38
TVP23B-202ENST00000476139 UNC45BQ8IWX7 931 aa17.44■□□□□ 0.38
TVP23B-202ENST00000476139 NXF3Q9H4D5 531 aaKnown RBP17.44■□□□□ 0.38
TVP23B-202ENST00000476139 GGA2Q9UJY4 613 aa17.44■□□□□ 0.38
TVP23B-202ENST00000476139 TCP11X1B4DZS4 312 aa17.44■□□□□ 0.38
TVP23B-202ENST00000476139 HOXD8P13378 290 aaPredicted RBP17.44■□□□□ 0.38
TVP23B-202ENST00000476139 ZNF143P52747 638 aaPredicted RBP17.44■□□□□ 0.38
TVP23B-202ENST00000476139 GSCP56915 257 aaPredicted RBP17.44■□□□□ 0.38
TVP23B-202ENST00000476139 ZNF200P98182 395 aaPredicted RBP17.44■□□□□ 0.38
TVP23B-202ENST00000476139 ANKRD22Q5VYY1 191 aa17.44■□□□□ 0.38
TVP23B-202ENST00000476139 IQSEC1Q6DN90 963 aa17.44■□□□□ 0.38
TVP23B-202ENST00000476139 NPNTQ6UXI9 565 aa17.44■□□□□ 0.38
TVP23B-202ENST00000476139 BBS12Q6ZW61 710 aa17.44■□□□□ 0.38
TVP23B-202ENST00000476139 TTC30AQ86WT1 665 aa17.44■□□□□ 0.38
TVP23B-202ENST00000476139 ZBED8Q8IZ13 594 aa17.44■□□□□ 0.38
TVP23B-202ENST00000476139 TMEM40Q8WWA1 233 aa17.44■□□□□ 0.38
TVP23B-202ENST00000476139 B3GNT5Q9BYG0 378 aa17.44■□□□□ 0.38
TVP23B-202ENST00000476139 FGFR1OP2Q9NVK5 253 aa17.44■□□□□ 0.38
TVP23B-202ENST00000476139 KLK14Q9P0G3 267 aa17.44■□□□□ 0.38
TVP23B-202ENST00000476139 SCN1AP35498 2009 aa17.44■□□□□ 0.38
TVP23B-202ENST00000476139 SMIM10L2AP0DMW4 78 aa17.43■□□□□ 0.38
TVP23B-202ENST00000476139 SMIM10L2BP0DMW5 78 aa17.43■□□□□ 0.38
TVP23B-202ENST00000476139 KYAT1Q16773 422 aa17.43■□□□□ 0.38
TVP23B-202ENST00000476139 GOLGA7BQ2TAP0 167 aa17.43■□□□□ 0.38
TVP23B-202ENST00000476139 CYP4V2Q6ZWL3 525 aaPredicted RBP17.43■□□□□ 0.38
TVP23B-202ENST00000476139 SRRM1Q8IYB3 904 aaKnown RBP17.43■□□□□ 0.38
TVP23B-202ENST00000476139 CCHCR1Q8TD31 782 aa17.43■□□□□ 0.38
TVP23B-202ENST00000476139 GBA2Q9HCG7 927 aaPredicted RBP17.43■□□□□ 0.38
TVP23B-202ENST00000476139 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.43■□□□□ 0.38
TVP23B-202ENST00000476139 TRIP11Q15643 1979 aa17.43■□□□□ 0.38
TVP23B-202ENST00000476139 KAT6AQ92794 2004 aa17.43■□□□□ 0.38
TVP23B-202ENST00000476139 C2CD4BA6NLJ0 364 aa17.43■□□□□ 0.38
TVP23B-202ENST00000476139 CCT8L1PA6NM43 557 aa17.43■□□□□ 0.38
TVP23B-202ENST00000476139 GABBR2O75899 941 aa17.43■□□□□ 0.38
TVP23B-202ENST00000476139 CTCFP49711 727 aaPredicted RBP17.43■□□□□ 0.38
TVP23B-202ENST00000476139 TAZQ16635 292 aa17.43■□□□□ 0.38
TVP23B-202ENST00000476139 SPRYD7Q5W111 196 aa17.43■□□□□ 0.38
TVP23B-202ENST00000476139 ANKMY2Q8IV38 441 aa17.43■□□□□ 0.38
TVP23B-202ENST00000476139 FAM71DQ8N9W8 422 aa17.43■□□□□ 0.38
TVP23B-202ENST00000476139 DNAJB3Q8WWF6 145 aa17.43■□□□□ 0.38
TVP23B-202ENST00000476139 DPEP3Q9H4B8 488 aa17.43■□□□□ 0.38
TVP23B-202ENST00000476139 FLRT1Q9NZU1 646 aa17.43■□□□□ 0.38
TVP23B-202ENST00000476139 SAMD15Q9P1V8 674 aa17.43■□□□□ 0.38
TVP23B-202ENST00000476139 BRAFP15056 766 aa17.43■□□□□ 0.38
TVP23B-202ENST00000476139 GCAP28676 217 aa17.43■□□□□ 0.38
TVP23B-202ENST00000476139 SYCP2LQ5T4T6 812 aa17.43■□□□□ 0.38
TVP23B-202ENST00000476139 SLC27A1Q6PCB7 646 aa17.43■□□□□ 0.38
TVP23B-202ENST00000476139 GCOM2Q9BZD3 368 aaPredicted RBP17.43■□□□□ 0.38
TVP23B-202ENST00000476139 PCDH9Q9HC56 1237 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms