RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 CYP2C18P33260 490 aa7.81□□□□□ -1.16
SMC5-203ENST00000475540 ZDHHC24Q6UX98 284 aa7.81□□□□□ -1.16
SMC5-203ENST00000475540 ZNF575Q86XF7 245 aa7.81□□□□□ -1.16
SMC5-203ENST00000475540 ABRAQ8N0Z2 381 aa7.81□□□□□ -1.16
SMC5-203ENST00000475540 LRRC71Q8N4P6 559 aa7.81□□□□□ -1.16
SMC5-203ENST00000475540 XAGE5Q8WWM1 108 aa7.81□□□□□ -1.16
SMC5-203ENST00000475540 SARAFQ96BY9 339 aa7.81□□□□□ -1.16
SMC5-203ENST00000475540 TIFAQ96CG3 184 aa7.81□□□□□ -1.16
SMC5-203ENST00000475540 ZNF764Q96H86 408 aaPredicted RBP7.81□□□□□ -1.16
SMC5-203ENST00000475540 NUP62CLQ9H1M0 184 aa7.81□□□□□ -1.16
SMC5-203ENST00000475540 LOC102723971A0A1B0GUV8 181 aa7.8□□□□□ -1.16
SMC5-203ENST00000475540 ERBB2P04626 1255 aa7.8□□□□□ -1.16
SMC5-203ENST00000475540 RPS16P62249 146 aaKnown RBP7.8□□□□□ -1.16
SMC5-203ENST00000475540 GALEQ14376 348 aa7.8□□□□□ -1.16
SMC5-203ENST00000475540 CYB5RLQ6IPT4 315 aa7.8□□□□□ -1.16
SMC5-203ENST00000475540 SYCE2Q6PIF2 218 aa7.8□□□□□ -1.16
SMC5-203ENST00000475540 PARS2Q7L3T8 475 aaKnown RBP7.8□□□□□ -1.16
SMC5-203ENST00000475540 IZUMO1Q8IYV9 350 aa7.8□□□□□ -1.16
SMC5-203ENST00000475540 R3HDM4Q96D70 268 aa7.8□□□□□ -1.16
SMC5-203ENST00000475540 DPCDQ9BVM2 203 aaPredicted RBP7.8□□□□□ -1.16
SMC5-203ENST00000475540 GBA2Q9HCG7 927 aaPredicted RBP7.8□□□□□ -1.16
SMC5-203ENST00000475540 DLL3Q9NYJ7 618 aa7.8□□□□□ -1.16
SMC5-203ENST00000475540 COL20A1Q9P218 1284 aa7.8□□□□□ -1.16
SMC5-203ENST00000475540 HDAC9Q9UKV0 1011 aa7.8□□□□□ -1.16
SMC5-203ENST00000475540 PADI4Q9UM07 663 aa7.8□□□□□ -1.16
SMC5-203ENST00000475540 TBC1D30Q9Y2I9 924 aa7.8□□□□□ -1.16
SMC5-203ENST00000475540 PCDHGB6Q9Y5F9 930 aa7.8□□□□□ -1.16
SMC5-203ENST00000475540 KIF3BO15066 747 aa7.79□□□□□ -1.16
SMC5-203ENST00000475540 HNRNPCP07910 306 aaKnown RBP eCLIP7.79□□□□□ -1.16
SMC5-203ENST00000475540 DRD4P21917 467 aa7.79□□□□□ -1.16
SMC5-203ENST00000475540 PCSK6P29122 969 aa7.79□□□□□ -1.16
SMC5-203ENST00000475540 PRKAR1BP31321 381 aa7.79□□□□□ -1.16
SMC5-203ENST00000475540 EEFSECP57772 596 aaKnown RBP7.79□□□□□ -1.16
SMC5-203ENST00000475540 TBC1D25Q3MII6 688 aa7.79□□□□□ -1.16
SMC5-203ENST00000475540 AARS2Q5JTZ9 985 aaKnown RBP7.79□□□□□ -1.16
SMC5-203ENST00000475540 AMIGO2Q86SJ2 522 aa7.79□□□□□ -1.16
SMC5-203ENST00000475540 SESTD1Q86VW0 696 aa7.79□□□□□ -1.16
SMC5-203ENST00000475540 RP9Q8TA86 221 aaKnown RBP7.79□□□□□ -1.16
SMC5-203ENST00000475540 C8orf48Q96LL4 319 aa7.79□□□□□ -1.16
SMC5-203ENST00000475540 CCP110O43303 1012 aa7.78□□□□□ -1.16
SMC5-203ENST00000475540 RGS10O43665 173 aa7.78□□□□□ -1.16
SMC5-203ENST00000475540 NHLH1Q02575 133 aa7.78□□□□□ -1.16
SMC5-203ENST00000475540 CCNIQ14094 377 aa7.78□□□□□ -1.16
SMC5-203ENST00000475540 SLC29A2Q14542 456 aa7.78□□□□□ -1.16
SMC5-203ENST00000475540 PTCHD3Q3KNS1 767 aa7.78□□□□□ -1.16
SMC5-203ENST00000475540 PCID2Q5JVF3 399 aa7.78□□□□□ -1.16
SMC5-203ENST00000475540 CERCAMQ5T4B2 595 aa7.78□□□□□ -1.16
SMC5-203ENST00000475540 CACHD1Q5VU97 1274 aa7.78□□□□□ -1.16
SMC5-203ENST00000475540 CEP85Q6P2H3 762 aa7.78□□□□□ -1.16
SMC5-203ENST00000475540 SLC29A4Q7RTT9 530 aa7.78□□□□□ -1.16
SMC5-203ENST00000475540 ZNF804AQ7Z570 1209 aa7.78□□□□□ -1.16
SMC5-203ENST00000475540 FANCBQ8NB91 859 aa7.78□□□□□ -1.16
SMC5-203ENST00000475540 TMEM171Q8WVE6 324 aa7.78□□□□□ -1.16
SMC5-203ENST00000475540 IPCEF1Q8WWN9 437 aaPredicted RBP7.78□□□□□ -1.16
SMC5-203ENST00000475540 SOCS4Q8WXH5 440 aa7.78□□□□□ -1.16
SMC5-203ENST00000475540 TBC1D5Q92609 795 aa7.78□□□□□ -1.16
SMC5-203ENST00000475540 BTBD1Q9H0C5 482 aa7.78□□□□□ -1.16
SMC5-203ENST00000475540 DUSP22Q9NRW4 184 aa7.78□□□□□ -1.16
SMC5-203ENST00000475540 ADAM21Q9UKJ8 722 aa7.78□□□□□ -1.16
SMC5-203ENST00000475540 ITGB1BP2Q9UKP3 347 aa7.78□□□□□ -1.16
SMC5-203ENST00000475540 SNX13Q9Y5W8 968 aa7.78□□□□□ -1.16
SMC5-203ENST00000475540 CDY1Q9Y6F8 540 aa7.78□□□□□ -1.16
SMC5-203ENST00000475540 H0YIZ8 118 aa7.77□□□□□ -1.17
SMC5-203ENST00000475540 MASP2O00187 686 aa7.77□□□□□ -1.17
SMC5-203ENST00000475540 RASAL1O95294 804 aa7.77□□□□□ -1.17
SMC5-203ENST00000475540 DLDP09622 509 aaKnown RBP7.77□□□□□ -1.17
SMC5-203ENST00000475540 ENGP17813 658 aa7.77□□□□□ -1.17
SMC5-203ENST00000475540 ARHGEF7Q14155 803 aa7.77□□□□□ -1.17
SMC5-203ENST00000475540 LY6KQ17RY6 165 aa7.77□□□□□ -1.17
SMC5-203ENST00000475540 CAND1Q86VP6 1230 aaKnown RBP7.77□□□□□ -1.17
SMC5-203ENST00000475540 YAF2Q8IY57 180 aa7.77□□□□□ -1.17
SMC5-203ENST00000475540 SMCR8Q8TEV9 937 aaPredicted RBP7.77□□□□□ -1.17
SMC5-203ENST00000475540 MSLNLQ96KJ4 702 aa7.77□□□□□ -1.17
SMC5-203ENST00000475540 STRBPQ96SI9 672 aaKnown RBP7.77□□□□□ -1.17
SMC5-203ENST00000475540 APOL5Q9BWW9 433 aa7.77□□□□□ -1.17
SMC5-203ENST00000475540 DDX21Q9NR30 783 aaKnown RBP eCLIP7.77□□□□□ -1.17
SMC5-203ENST00000475540 SNX14Q9Y5W7 946 aa7.77□□□□□ -1.17
SMC5-203ENST00000475540 JTBO76095 146 aa7.76□□□□□ -1.17
SMC5-203ENST00000475540 PRKCBP05771 671 aa7.76□□□□□ -1.17
SMC5-203ENST00000475540 TPTEP56180 551 aa7.76□□□□□ -1.17
SMC5-203ENST00000475540 SLC9A4Q6AI14 798 aa7.76□□□□□ -1.17
SMC5-203ENST00000475540 DNAJB14Q8TBM8 379 aa7.76□□□□□ -1.17
SMC5-203ENST00000475540 PHKBQ93100 1093 aa7.76□□□□□ -1.17
SMC5-203ENST00000475540 CCDC136Q96JN2 1154 aa7.76□□□□□ -1.17
SMC5-203ENST00000475540 C17orf80Q9BSJ5 609 aa7.76□□□□□ -1.17
SMC5-203ENST00000475540 TRIM5Q9C035 493 aa7.76□□□□□ -1.17
SMC5-203ENST00000475540 CHST8Q9H2A9 424 aa7.76□□□□□ -1.17
SMC5-203ENST00000475540 DHX36Q9H2U1 1008 aaKnown RBP7.76□□□□□ -1.17
SMC5-203ENST00000475540 USP22Q9UPT9 525 aa7.76□□□□□ -1.17
SMC5-203ENST00000475540 H7C4K7 107 aa7.75□□□□□ -1.17
SMC5-203ENST00000475540 RAB27BO00194 218 aa7.75□□□□□ -1.17
SMC5-203ENST00000475540 PSMD9O00233 223 aa7.75□□□□□ -1.17
SMC5-203ENST00000475540 FOXN3O00409 490 aaPredicted RBP7.75□□□□□ -1.17
SMC5-203ENST00000475540 PQBP1O60828 265 aaKnown RBP7.75□□□□□ -1.17
SMC5-203ENST00000475540 SRGAP2O75044 1071 aa7.75□□□□□ -1.17
SMC5-203ENST00000475540 INMTO95050 263 aa7.75□□□□□ -1.17
SMC5-203ENST00000475540 NPSP0C0P6 89 aa7.75□□□□□ -1.17
SMC5-203ENST00000475540 TXNP10599 105 aaKnown RBP7.75□□□□□ -1.17
SMC5-203ENST00000475540 PTDSS1P48651 473 aaKnown RBP7.75□□□□□ -1.17
SMC5-203ENST00000475540 SUMO4Q6EEV6 95 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms