RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 DPH6Q7L8W6 267 aa13.49□□□□□ -0.25
SKA3-206ENST00000475251 ZNF720Q7Z2F6 126 aa13.49□□□□□ -0.25
SKA3-206ENST00000475251 RABEPKQ7Z6M1 372 aa13.49□□□□□ -0.25
SKA3-206ENST00000475251 BRSK2Q8IWQ3 736 aa13.49□□□□□ -0.25
SKA3-206ENST00000475251 HDDC3Q8N4P3 179 aa13.49□□□□□ -0.25
SKA3-206ENST00000475251 CCDC33Q8N5R6 958 aa13.49□□□□□ -0.25
SKA3-206ENST00000475251 CSGALNACT2Q8N6G5 542 aa13.49□□□□□ -0.25
SKA3-206ENST00000475251 SPATA17Q96L03 361 aa13.49□□□□□ -0.25
SKA3-206ENST00000475251 PNKPQ96T60 521 aa13.49□□□□□ -0.25
SKA3-206ENST00000475251 PKMYT1Q99640 499 aa13.49□□□□□ -0.25
SKA3-206ENST00000475251 FAM213AQ9BRX8 229 aa13.49□□□□□ -0.25
SKA3-206ENST00000475251 LINC00597Q9H2U6 94 aa13.49□□□□□ -0.25
SKA3-206ENST00000475251 BCCIPQ9P287 314 aaKnown RBP eCLIP13.49□□□□□ -0.25
SKA3-206ENST00000475251 MAGEC2Q9UBF1 373 aaPredicted RBP13.49□□□□□ -0.25
SKA3-206ENST00000475251 SEL1LQ9UBV2 794 aa13.49□□□□□ -0.25
SKA3-206ENST00000475251 CIZ1Q9ULV3 898 aaPredicted RBP13.49□□□□□ -0.25
SKA3-206ENST00000475251 MSRB2Q9Y3D2 182 aa13.49□□□□□ -0.25
SKA3-206ENST00000475251 SNX9Q9Y5X1 595 aa13.49□□□□□ -0.25
SKA3-206ENST00000475251 CEP295Q9C0D2 2601 aa13.49□□□□□ -0.25
SKA3-206ENST00000475251 HELZP42694 1942 aaKnown RBP13.49□□□□□ -0.25
SKA3-206ENST00000475251 UPK3BL1B0FP48 263 aa13.48□□□□□ -0.25
SKA3-206ENST00000475251 UPK3BL2E5RIL1 263 aa13.48□□□□□ -0.25
SKA3-206ENST00000475251 LEFTY2O00292 366 aa13.48□□□□□ -0.25
SKA3-206ENST00000475251 GABRDO14764 452 aa13.48□□□□□ -0.25
SKA3-206ENST00000475251 APODP05090 189 aa13.48□□□□□ -0.25
SKA3-206ENST00000475251 KRT19P08727 400 aa13.48□□□□□ -0.25
SKA3-206ENST00000475251 ENGP17813 658 aa13.48□□□□□ -0.25
SKA3-206ENST00000475251 DDIT3P35638 169 aa13.48□□□□□ -0.25
SKA3-206ENST00000475251 MAPK8P45983 427 aa13.48□□□□□ -0.25
SKA3-206ENST00000475251 HNRNPDQ14103 355 aaKnown RBP13.48□□□□□ -0.25
SKA3-206ENST00000475251 PREPLQ4J6C6 727 aaPredicted RBP13.48□□□□□ -0.25
SKA3-206ENST00000475251 LYSMD4Q5XG99 296 aa13.48□□□□□ -0.25
SKA3-206ENST00000475251 DENND5BQ6ZUT9 1274 aa13.48□□□□□ -0.25
SKA3-206ENST00000475251 DDX42Q86XP3 938 aaKnown RBP eCLIP13.48□□□□□ -0.25
SKA3-206ENST00000475251 C1orf127Q8N9H9 656 aa13.48□□□□□ -0.25
SKA3-206ENST00000475251 TXNDC5Q8NBS9 432 aaKnown RBP13.48□□□□□ -0.25
SKA3-206ENST00000475251 CEP76Q8TAP6 659 aa13.48□□□□□ -0.25
SKA3-206ENST00000475251 MRPL44Q9H9J2 332 aaKnown RBP13.48□□□□□ -0.25
SKA3-206ENST00000475251 RBAKQ9NYW8 714 aaPredicted RBP13.48□□□□□ -0.25
SKA3-206ENST00000475251 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.47□□□□□ -0.25
SKA3-206ENST00000475251 TRIM66O15016 1216 aa13.47□□□□□ -0.25
SKA3-206ENST00000475251 AP5Z1O43299 807 aa13.47□□□□□ -0.25
SKA3-206ENST00000475251 KAT7O95251 611 aa13.47□□□□□ -0.25
SKA3-206ENST00000475251 KLF8O95600 359 aaPredicted RBP13.47□□□□□ -0.25
SKA3-206ENST00000475251 TOP3BO95985 862 aaKnown RBP13.47□□□□□ -0.25
SKA3-206ENST00000475251 ADH1CP00326 375 aa13.47□□□□□ -0.25
SKA3-206ENST00000475251 CYP17A1P05093 508 aa13.47□□□□□ -0.25
SKA3-206ENST00000475251 NEFLP07196 543 aa13.47□□□□□ -0.25
SKA3-206ENST00000475251 TMEM191BP0C7N4 346 aa13.47□□□□□ -0.25
SKA3-206ENST00000475251 GARTP22102 1010 aa13.47□□□□□ -0.25
SKA3-206ENST00000475251 ADSSP30520 456 aa13.47□□□□□ -0.25
SKA3-206ENST00000475251 GRIK1P39086 918 aa13.47□□□□□ -0.25
SKA3-206ENST00000475251 SLC7A9P82251 487 aa13.47□□□□□ -0.25
SKA3-206ENST00000475251 RESTQ13127 1097 aa13.47□□□□□ -0.25
SKA3-206ENST00000475251 KIAA1211LQ6NV74 962 aa13.47□□□□□ -0.25
SKA3-206ENST00000475251 FAM171BQ6P995 826 aa13.47□□□□□ -0.25
SKA3-206ENST00000475251 LRSAM1Q6UWE0 723 aa13.47□□□□□ -0.25
SKA3-206ENST00000475251 NUDT18Q6ZVK8 323 aa13.47□□□□□ -0.25
SKA3-206ENST00000475251 TRMT11Q7Z4G4 463 aaKnown RBP13.47□□□□□ -0.25
SKA3-206ENST00000475251 FILIP1Q7Z7B0 1213 aa13.47□□□□□ -0.25
SKA3-206ENST00000475251 TMEFF1Q8IYR6 380 aa13.47□□□□□ -0.25
SKA3-206ENST00000475251 ABCA7Q8IZY2 2146 aa13.47□□□□□ -0.25
SKA3-206ENST00000475251 ALLCQ8N6M5 410 aa13.47□□□□□ -0.25
SKA3-206ENST00000475251 LRRC15Q8TF66 581 aa13.47□□□□□ -0.25
SKA3-206ENST00000475251 ACCSQ96QU6 501 aa13.47□□□□□ -0.25
SKA3-206ENST00000475251 SYT15Q9BQS2 421 aa13.47□□□□□ -0.25
SKA3-206ENST00000475251 TBC1D14Q9P2M4 693 aa13.47□□□□□ -0.25
SKA3-206ENST00000475251 CDH9Q9ULB4 789 aa13.47□□□□□ -0.25
SKA3-206ENST00000475251 LHX6Q9UPM6 363 aa13.47□□□□□ -0.25
SKA3-206ENST00000475251 ANAPC1Q9H1A4 1944 aa13.47□□□□□ -0.25
SKA3-206ENST00000475251 A0A0A0MRY4 1105 aa13.46□□□□□ -0.25
SKA3-206ENST00000475251 HYAL3O43820 417 aaPredicted RBP13.46□□□□□ -0.25
SKA3-206ENST00000475251 PPP1R37O75864 691 aa13.46□□□□□ -0.25
SKA3-206ENST00000475251 CFIP05156 583 aa13.46□□□□□ -0.25
SKA3-206ENST00000475251 GAP43P17677 238 aa13.46□□□□□ -0.25
SKA3-206ENST00000475251 TIE1P35590 1138 aa13.46□□□□□ -0.25
SKA3-206ENST00000475251 GRIA2P42262 883 aa13.46□□□□□ -0.25
SKA3-206ENST00000475251 TNFRSF4P43489 277 aa13.46□□□□□ -0.25
SKA3-206ENST00000475251 SIM1P81133 766 aaPredicted RBP13.46□□□□□ -0.25
SKA3-206ENST00000475251 GFPT1Q06210 699 aaPredicted RBP13.46□□□□□ -0.25
SKA3-206ENST00000475251 SEMA3BQ13214 749 aa13.46□□□□□ -0.25
SKA3-206ENST00000475251 ALCAMQ13740 583 aa13.46□□□□□ -0.25
SKA3-206ENST00000475251 DHCR24Q15392 516 aa13.46□□□□□ -0.25
SKA3-206ENST00000475251 DUOXA1Q1HG43 343 aa13.46□□□□□ -0.25
SKA3-206ENST00000475251 L1TD1Q5T7N2 865 aaKnown RBP13.46□□□□□ -0.25
SKA3-206ENST00000475251 PEAR1Q5VY43 1037 aaPredicted RBP13.46□□□□□ -0.25
SKA3-206ENST00000475251 TMEM92Q6UXU6 159 aa13.46□□□□□ -0.25
SKA3-206ENST00000475251 SLC36A4Q6YBV0 504 aa13.46□□□□□ -0.25
SKA3-206ENST00000475251 ARMCX6Q7L4S7 300 aa13.46□□□□□ -0.25
SKA3-206ENST00000475251 OSTM1Q86WC4 334 aa13.46□□□□□ -0.25
SKA3-206ENST00000475251 SFR1Q86XK3 245 aa13.46□□□□□ -0.25
SKA3-206ENST00000475251 ADGRG2Q8IZP9 1017 aa13.46□□□□□ -0.25
SKA3-206ENST00000475251 SYCP3Q8IZU3 236 aa13.46□□□□□ -0.25
SKA3-206ENST00000475251 PGBD3Q8N328 593 aa13.46□□□□□ -0.25
SKA3-206ENST00000475251 IL17RCQ8NAC3 791 aa13.46□□□□□ -0.25
SKA3-206ENST00000475251 KCNV2Q8TDN2 545 aa13.46□□□□□ -0.25
SKA3-206ENST00000475251 RLN3Q8WXF3 142 aa13.46□□□□□ -0.25
SKA3-206ENST00000475251 MYLPFQ96A32 169 aa13.46□□□□□ -0.25
SKA3-206ENST00000475251 ANKRD36BP1Q96IX9 119 aa13.46□□□□□ -0.25
SKA3-206ENST00000475251 FNBP1Q96RU3 617 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms