RNA–Protein interactions for RNA: ENST00000475213.1

SSR1-205, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3

Gene SSR1, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-205ENST00000475213 ATG2BQ96BY7 2078 aa13.06□□□□□ -0.32
SSR1-205ENST00000475213 EP300Q09472 2414 aaPredicted RBP13.05□□□□□ -0.32
SSR1-205ENST00000475213 F8VP50 259 aa13.05□□□□□ -0.32
SSR1-205ENST00000475213 SPECC1L-ADORA2AF8WAN1 911 aa13.05□□□□□ -0.32
SSR1-205ENST00000475213 IKBKBO14920 756 aa13.05□□□□□ -0.32
SSR1-205ENST00000475213 MAPK13O15264 365 aa13.05□□□□□ -0.32
SSR1-205ENST00000475213 AKAP3O75969 853 aa13.05□□□□□ -0.32
SSR1-205ENST00000475213 CHRNB1P11230 501 aa13.05□□□□□ -0.32
SSR1-205ENST00000475213 ANXA13P27216 316 aa13.05□□□□□ -0.32
SSR1-205ENST00000475213 CTHP32929 405 aa13.05□□□□□ -0.32
SSR1-205ENST00000475213 RAP1GAPP47736 663 aa13.05□□□□□ -0.32
SSR1-205ENST00000475213 VAMP7P51809 220 aa13.05□□□□□ -0.32
SSR1-205ENST00000475213 USP46P62068 366 aa13.05□□□□□ -0.32
SSR1-205ENST00000475213 CSTF1Q05048 431 aaKnown RBP13.05□□□□□ -0.32
SSR1-205ENST00000475213 MTAPQ13126 283 aa13.05□□□□□ -0.32
SSR1-205ENST00000475213 PNOCQ13519 176 aa13.05□□□□□ -0.32
SSR1-205ENST00000475213 ZNF268Q14587 947 aaPredicted RBP13.05□□□□□ -0.32
SSR1-205ENST00000475213 SGSM1Q2NKQ1 1148 aa13.05□□□□□ -0.32
SSR1-205ENST00000475213 ZNF528Q3MIS6 628 aa13.05□□□□□ -0.32
SSR1-205ENST00000475213 C1orf228Q6PIY5 440 aa13.05□□□□□ -0.32
SSR1-205ENST00000475213 TXNDC11Q6PKC3 985 aa13.05□□□□□ -0.32
SSR1-205ENST00000475213 SCARA5Q6ZMJ2 495 aa13.05□□□□□ -0.32
SSR1-205ENST00000475213 DENND5BQ6ZUT9 1274 aa13.05□□□□□ -0.32
SSR1-205ENST00000475213 SV2AQ7L0J3 742 aa13.05□□□□□ -0.32
SSR1-205ENST00000475213 RIN3Q8TB24 985 aa13.05□□□□□ -0.32
SSR1-205ENST00000475213 CCDC34Q96HJ3 373 aa13.05□□□□□ -0.32
SSR1-205ENST00000475213 CEP295NLQ96MC4 621 aa13.05□□□□□ -0.32
SSR1-205ENST00000475213 HS3ST6Q96QI5 342 aa13.05□□□□□ -0.32
SSR1-205ENST00000475213 SLC22A12Q96S37 553 aa13.05□□□□□ -0.32
SSR1-205ENST00000475213 FAM83CQ9BQN1 747 aa13.05□□□□□ -0.32
SSR1-205ENST00000475213 B3GNT5Q9BYG0 378 aa13.05□□□□□ -0.32
SSR1-205ENST00000475213 SDCBP2Q9H190 292 aa13.05□□□□□ -0.32
SSR1-205ENST00000475213 CHRDQ9H2X0 955 aa13.05□□□□□ -0.32
SSR1-205ENST00000475213 KIF9Q9HAQ2 790 aa13.05□□□□□ -0.32
SSR1-205ENST00000475213 TRPC7Q9HCX4 862 aa13.05□□□□□ -0.32
SSR1-205ENST00000475213 GKN1Q9NS71 199 aa13.05□□□□□ -0.32
SSR1-205ENST00000475213 TMEM30AQ9NV96 361 aa13.05□□□□□ -0.32
SSR1-205ENST00000475213 C2orf78A6NCI8 922 aa13.04□□□□□ -0.32
SSR1-205ENST00000475213 GOLGA6L4A6NEF3 574 aa13.04□□□□□ -0.32
SSR1-205ENST00000475213 CLDN5O00501 218 aa13.04□□□□□ -0.32
SSR1-205ENST00000475213 CACNA2D1P54289 1103 aa13.04□□□□□ -0.32
SSR1-205ENST00000475213 NOP14P78316 857 aaKnown RBP13.04□□□□□ -0.32
SSR1-205ENST00000475213 ADAM9Q13443 819 aa13.04□□□□□ -0.32
SSR1-205ENST00000475213 ZCWPW2Q504Y3 356 aa13.04□□□□□ -0.32
SSR1-205ENST00000475213 WDR44Q5JSH3 913 aa13.04□□□□□ -0.32
SSR1-205ENST00000475213 TRIM68Q6AZZ1 485 aa13.04□□□□□ -0.32
SSR1-205ENST00000475213 ZC3H14Q6PJT7 736 aaKnown RBP13.04□□□□□ -0.32
SSR1-205ENST00000475213 RALGPS2Q86X27 583 aaPredicted RBP13.04□□□□□ -0.32
SSR1-205ENST00000475213 SMYD4Q8IYR2 804 aaPredicted RBP13.04□□□□□ -0.32
SSR1-205ENST00000475213 ENGASEQ8NFI3 743 aa13.04□□□□□ -0.32
SSR1-205ENST00000475213 C8orf48Q96LL4 319 aa13.04□□□□□ -0.32
SSR1-205ENST00000475213 CYP2S1Q96SQ9 504 aa13.04□□□□□ -0.32
SSR1-205ENST00000475213 TTLL2Q9BWV7 592 aa13.04□□□□□ -0.32
SSR1-205ENST00000475213 ZNF518BQ9C0D4 1074 aa13.04□□□□□ -0.32
SSR1-205ENST00000475213 ELOVL4Q9GZR5 314 aa13.04□□□□□ -0.32
SSR1-205ENST00000475213 SEMA4AQ9H3S1 761 aa13.04□□□□□ -0.32
SSR1-205ENST00000475213 HPS4Q9NQG7 708 aa13.04□□□□□ -0.32
SSR1-205ENST00000475213 PRMT8Q9NR22 394 aaPredicted RBP13.04□□□□□ -0.32
SSR1-205ENST00000475213 GCNT4Q9P109 453 aa13.04□□□□□ -0.32
SSR1-205ENST00000475213 GVINP1Q7Z2Y8 2422 aa13.04□□□□□ -0.32
SSR1-205ENST00000475213 ZNF292O60281 2723 aa13.04□□□□□ -0.32
SSR1-205ENST00000475213 TRAV19A0A0A6YYK7 116 aa13.03□□□□□ -0.32
SSR1-205ENST00000475213 ASS1P00966 412 aaKnown RBP13.03□□□□□ -0.32
SSR1-205ENST00000475213 HLA-DRAP01903 254 aa13.03□□□□□ -0.32
SSR1-205ENST00000475213 LMNAP02545 664 aaKnown RBP13.03□□□□□ -0.32
SSR1-205ENST00000475213 CKMP06732 381 aa13.03□□□□□ -0.32
SSR1-205ENST00000475213 USP17L7P0C7H9 530 aa13.03□□□□□ -0.32
SSR1-205ENST00000475213 TRIM49P0CI25 452 aa13.03□□□□□ -0.32
SSR1-205ENST00000475213 TRIM49CP0CI26 452 aa13.03□□□□□ -0.32
SSR1-205ENST00000475213 P4HA1P13674 534 aa13.03□□□□□ -0.32
SSR1-205ENST00000475213 RPL13P26373 211 aaKnown RBP13.03□□□□□ -0.32
SSR1-205ENST00000475213 PSMC2P35998 433 aaKnown RBP13.03□□□□□ -0.32
SSR1-205ENST00000475213 PIK3CAP42336 1068 aa13.03□□□□□ -0.32
SSR1-205ENST00000475213 FAM160A1Q05DH4 1040 aa13.03□□□□□ -0.32
SSR1-205ENST00000475213 RUNX3Q13761 415 aa13.03□□□□□ -0.32
SSR1-205ENST00000475213 PON2Q15165 354 aa13.03□□□□□ -0.32
SSR1-205ENST00000475213 ZNF77Q15935 545 aa13.03□□□□□ -0.32
SSR1-205ENST00000475213 ITPRIPL2Q3MIP1 535 aa13.03□□□□□ -0.32
SSR1-205ENST00000475213 SPOPLQ6IQ16 392 aa13.03□□□□□ -0.32
SSR1-205ENST00000475213 TSSK4Q6SA08 328 aa13.03□□□□□ -0.32
SSR1-205ENST00000475213 INTS8Q75QN2 995 aaKnown RBP13.03□□□□□ -0.32
SSR1-205ENST00000475213 FAM186BQ8IYM0 893 aa13.03□□□□□ -0.32
SSR1-205ENST00000475213 ARL14EPQ8N8R7 260 aaPredicted RBP13.03□□□□□ -0.32
SSR1-205ENST00000475213 TAF4BQ92750 862 aa13.03□□□□□ -0.32
SSR1-205ENST00000475213 IER2Q9BTL4 223 aa13.03□□□□□ -0.32
SSR1-205ENST00000475213 EBF3Q9H4W6 596 aa13.03□□□□□ -0.32
SSR1-205ENST00000475213 TRPM5Q9NZQ8 1165 aa13.03□□□□□ -0.32
SSR1-205ENST00000475213 OTOGLQ3ZCN5 2332 aa13.03□□□□□ -0.32
SSR1-205ENST00000475213 SPTBN4Q9H254 2564 aa13.02□□□□□ -0.32
SSR1-205ENST00000475213 OTOL1A6NHN0 477 aaPredicted RBP13.02□□□□□ -0.33
SSR1-205ENST00000475213 KRT13P13646 458 aa13.02□□□□□ -0.33
SSR1-205ENST00000475213 ARSAP15289 507 aa13.02□□□□□ -0.33
SSR1-205ENST00000475213 HDCP19113 662 aa13.02□□□□□ -0.33
SSR1-205ENST00000475213 ASPAP45381 313 aa13.02□□□□□ -0.33
SSR1-205ENST00000475213 GCLMP48507 274 aa13.02□□□□□ -0.33
SSR1-205ENST00000475213 ENPEPQ07075 957 aa13.02□□□□□ -0.33
SSR1-205ENST00000475213 PPP3CAQ08209 521 aa13.02□□□□□ -0.33
SSR1-205ENST00000475213 USP4Q13107 963 aa13.02□□□□□ -0.33
SSR1-205ENST00000475213 LRRC32Q14392 662 aa13.02□□□□□ -0.33
SSR1-205ENST00000475213 GAS6Q14393 721 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms