RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 MTIF2P46199 727 aaKnown RBP12.64□□□□□ -0.39
CLIP2-204ENST00000474962 LHX1P48742 406 aa12.64□□□□□ -0.39
CLIP2-204ENST00000474962 ZNF165P49910 485 aa12.64□□□□□ -0.39
CLIP2-204ENST00000474962 MLLT6P55198 1093 aaPredicted RBP12.64□□□□□ -0.39
CLIP2-204ENST00000474962 TPM4P67936 248 aa12.64□□□□□ -0.39
CLIP2-204ENST00000474962 MYL7Q01449 175 aa12.64□□□□□ -0.39
CLIP2-204ENST00000474962 MYL5Q02045 173 aa12.64□□□□□ -0.39
CLIP2-204ENST00000474962 ENPEPQ07075 957 aa12.64□□□□□ -0.39
CLIP2-204ENST00000474962 CETN1Q12798 172 aa12.64□□□□□ -0.39
CLIP2-204ENST00000474962 MYO1EQ12965 1108 aa12.64□□□□□ -0.39
CLIP2-204ENST00000474962 GAS6Q14393 721 aa12.64□□□□□ -0.39
CLIP2-204ENST00000474962 INTS6LQ5JSJ4 861 aaKnown RBP12.64□□□□□ -0.39
CLIP2-204ENST00000474962 TRAPPC11Q7Z392 1133 aa12.64□□□□□ -0.39
CLIP2-204ENST00000474962 LIMS2Q7Z4I7 341 aa12.64□□□□□ -0.39
CLIP2-204ENST00000474962 ZC3H3Q8IXZ2 948 aaKnown RBP12.64□□□□□ -0.39
CLIP2-204ENST00000474962 KIAA2013Q8IYS2 634 aa12.64□□□□□ -0.39
CLIP2-204ENST00000474962 ADGRF2Q8IZF7 708 aa12.64□□□□□ -0.39
CLIP2-204ENST00000474962 CMTM8Q8IZV2 173 aa12.64□□□□□ -0.39
CLIP2-204ENST00000474962 TOP6BLQ8N6T0 577 aa12.64□□□□□ -0.39
CLIP2-204ENST00000474962 CCDC150Q8NCX0 1101 aa12.64□□□□□ -0.39
CLIP2-204ENST00000474962 KBTBD7Q8WVZ9 684 aa12.64□□□□□ -0.39
CLIP2-204ENST00000474962 ZNF516Q92618 1163 aa12.64□□□□□ -0.39
CLIP2-204ENST00000474962 NELL1Q92832 810 aa12.64□□□□□ -0.39
CLIP2-204ENST00000474962 CYP2S1Q96SQ9 504 aa12.64□□□□□ -0.39
CLIP2-204ENST00000474962 CHRDQ9H2X0 955 aa12.64□□□□□ -0.39
CLIP2-204ENST00000474962 THAP9Q9H5L6 903 aa12.64□□□□□ -0.39
CLIP2-204ENST00000474962 GKN1Q9NS71 199 aa12.64□□□□□ -0.39
CLIP2-204ENST00000474962 ZSCAN32Q9NX65 697 aa12.64□□□□□ -0.39
CLIP2-204ENST00000474962 NFE2L3Q9Y4A8 694 aa12.64□□□□□ -0.39
CLIP2-204ENST00000474962 OTOL1A6NHN0 477 aaPredicted RBP12.63□□□□□ -0.39
CLIP2-204ENST00000474962 SPECC1L-ADORA2AF8WAN1 911 aa12.63□□□□□ -0.39
CLIP2-204ENST00000474962 HOXC13P31276 330 aa12.63□□□□□ -0.39
CLIP2-204ENST00000474962 GTF2H1P32780 548 aa12.63□□□□□ -0.39
CLIP2-204ENST00000474962 GCLMP48507 274 aa12.63□□□□□ -0.39
CLIP2-204ENST00000474962 ARHGAP29Q52LW3 1261 aa12.63□□□□□ -0.39
CLIP2-204ENST00000474962 FAM171BQ6P995 826 aa12.63□□□□□ -0.39
CLIP2-204ENST00000474962 MAMSTRQ6ZN01 415 aa12.63□□□□□ -0.39
CLIP2-204ENST00000474962 SCN4BQ8IWT1 228 aa12.63□□□□□ -0.39
CLIP2-204ENST00000474962 CELF5Q8N6W0 485 aaKnown RBP12.63□□□□□ -0.39
CLIP2-204ENST00000474962 ZBTB44Q8NCP5 570 aa12.63□□□□□ -0.39
CLIP2-204ENST00000474962 BPIFB1Q8TDL5 484 aa12.63□□□□□ -0.39
CLIP2-204ENST00000474962 USP13Q92995 863 aaPredicted RBP12.63□□□□□ -0.39
CLIP2-204ENST00000474962 CNOT6LQ96LI5 555 aaKnown RBP12.63□□□□□ -0.39
CLIP2-204ENST00000474962 GCNAQ96QF7 691 aa12.63□□□□□ -0.39
CLIP2-204ENST00000474962 MMS19Q96T76 1030 aa12.63□□□□□ -0.39
CLIP2-204ENST00000474962 IMPG2Q9BZV3 1241 aa12.63□□□□□ -0.39
CLIP2-204ENST00000474962 C8orf33Q9H7E9 229 aaPredicted RBP12.63□□□□□ -0.39
CLIP2-204ENST00000474962 PRMT8Q9NR22 394 aaPredicted RBP12.63□□□□□ -0.39
CLIP2-204ENST00000474962 OBP2AQ9NY56 170 aa12.63□□□□□ -0.39
CLIP2-204ENST00000474962 PCDHGA2Q9Y5H1 932 aa12.63□□□□□ -0.39
CLIP2-204ENST00000474962 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.63□□□□□ -0.39
CLIP2-204ENST00000474962 TSC2P49815 1807 aa12.62□□□□□ -0.39
CLIP2-204ENST00000474962 TICRRQ7Z2Z1 1910 aa12.62□□□□□ -0.39
CLIP2-204ENST00000474962 GOLGA6L19H0YKK7 550 aa12.62□□□□□ -0.39
CLIP2-204ENST00000474962 PES1O00541 588 aaKnown RBP12.62□□□□□ -0.39
CLIP2-204ENST00000474962 TRIM49P0CI25 452 aa12.62□□□□□ -0.39
CLIP2-204ENST00000474962 TRIM49CP0CI26 452 aa12.62□□□□□ -0.39
CLIP2-204ENST00000474962 CSH1P0DML2 217 aa12.62□□□□□ -0.39
CLIP2-204ENST00000474962 CSH2P0DML3 217 aa12.62□□□□□ -0.39
CLIP2-204ENST00000474962 TDGF1P13385 188 aa12.62□□□□□ -0.39
CLIP2-204ENST00000474962 PCSK1P29120 753 aa12.62□□□□□ -0.39
CLIP2-204ENST00000474962 CTHP32929 405 aa12.62□□□□□ -0.39
CLIP2-204ENST00000474962 GNL1P36915 607 aaPredicted RBP12.62□□□□□ -0.39
CLIP2-204ENST00000474962 AVPR1AP37288 418 aa12.62□□□□□ -0.39
CLIP2-204ENST00000474962 PSMC1P62191 440 aaKnown RBP12.62□□□□□ -0.39
CLIP2-204ENST00000474962 RPL10AP62906 217 aaKnown RBP12.62□□□□□ -0.39
CLIP2-204ENST00000474962 DLG4P78352 724 aa12.62□□□□□ -0.39
CLIP2-204ENST00000474962 SATB1Q01826 763 aa12.62□□□□□ -0.39
CLIP2-204ENST00000474962 PON2Q15165 354 aa12.62□□□□□ -0.39
CLIP2-204ENST00000474962 HSP90AA4PQ58FG1 418 aa12.62□□□□□ -0.39
CLIP2-204ENST00000474962 KRT39Q6A163 491 aa12.62□□□□□ -0.39
CLIP2-204ENST00000474962 TRIM68Q6AZZ1 485 aa12.62□□□□□ -0.39
CLIP2-204ENST00000474962 DPH6Q7L8W6 267 aa12.62□□□□□ -0.39
CLIP2-204ENST00000474962 MON1AQ86VX9 555 aa12.62□□□□□ -0.39
CLIP2-204ENST00000474962 RALGPS2Q86X27 583 aaPredicted RBP12.62□□□□□ -0.39
CLIP2-204ENST00000474962 SPATA2LQ8IUW3 424 aaPredicted RBP12.62□□□□□ -0.39
CLIP2-204ENST00000474962 AOPEPQ8N6M6 819 aa12.62□□□□□ -0.39
CLIP2-204ENST00000474962 RIN3Q8TB24 985 aa12.62□□□□□ -0.39
CLIP2-204ENST00000474962 RUBCNQ92622 972 aa12.62□□□□□ -0.39
CLIP2-204ENST00000474962 SLC22A12Q96S37 553 aa12.62□□□□□ -0.39
CLIP2-204ENST00000474962 HINFPQ9BQA5 517 aa12.62□□□□□ -0.39
CLIP2-204ENST00000474962 FAM83CQ9BQN1 747 aa12.62□□□□□ -0.39
CLIP2-204ENST00000474962 BPIFA3Q9BQP9 254 aa12.62□□□□□ -0.39
CLIP2-204ENST00000474962 MRPL45Q9BRJ2 306 aaKnown RBP12.62□□□□□ -0.39
CLIP2-204ENST00000474962 TSPY26PQ9H489 355 aa12.62□□□□□ -0.39
CLIP2-204ENST00000474962 TMEM8AQ9HCN3 771 aa12.62□□□□□ -0.39
CLIP2-204ENST00000474962 ABCB6Q9NP58 842 aa12.62□□□□□ -0.39
CLIP2-204ENST00000474962 CRTAC1Q9NQ79 661 aa12.62□□□□□ -0.39
CLIP2-204ENST00000474962 TDP1Q9NUW8 608 aa12.62□□□□□ -0.39
CLIP2-204ENST00000474962 C2orf42Q9NWW7 574 aa12.62□□□□□ -0.39
CLIP2-204ENST00000474962 THG1LQ9NWX6 298 aaKnown RBP12.62□□□□□ -0.39
CLIP2-204ENST00000474962 KCNJ18B7U540 433 aa12.61□□□□□ -0.39
CLIP2-204ENST00000474962 LILRB5O75023 590 aa12.61□□□□□ -0.39
CLIP2-204ENST00000474962 TADA3O75528 432 aa12.61□□□□□ -0.39
CLIP2-204ENST00000474962 NOL4O94818 638 aa12.61□□□□□ -0.39
CLIP2-204ENST00000474962 PRKCSHP14314 528 aaPredicted RBP12.61□□□□□ -0.39
CLIP2-204ENST00000474962 BDNFP23560 247 aa12.61□□□□□ -0.39
CLIP2-204ENST00000474962 EEF1GP26641 437 aaKnown RBP12.61□□□□□ -0.39
CLIP2-204ENST00000474962 ATICP31939 592 aa12.61□□□□□ -0.39
CLIP2-204ENST00000474962 PIK3CAP42336 1068 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms