RNA–Protein interactions for RNA: ENST00000474961.5

DDX39B-217, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 974 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-217ENST00000474961 ERVFC1P60507 584 aa10.07□□□□□ -0.8
DDX39B-217ENST00000474961 SMAD3P84022 425 aaKnown RBP10.07□□□□□ -0.8
DDX39B-217ENST00000474961 CYP27A1Q02318 531 aa10.07□□□□□ -0.8
DDX39B-217ENST00000474961 UBE3AQ05086 875 aa10.07□□□□□ -0.8
DDX39B-217ENST00000474961 GPM6BQ13491 265 aa10.07□□□□□ -0.8
DDX39B-217ENST00000474961 MAPRE1Q15691 268 aaKnown RBP10.07□□□□□ -0.8
DDX39B-217ENST00000474961 PTPRNQ16849 979 aa10.07□□□□□ -0.8
DDX39B-217ENST00000474961 CLEC16AQ2KHT3 1053 aa10.07□□□□□ -0.8
DDX39B-217ENST00000474961 SLC39A12Q504Y0 691 aa10.07□□□□□ -0.8
DDX39B-217ENST00000474961 HABP4Q5JVS0 413 aaKnown RBP10.07□□□□□ -0.8
DDX39B-217ENST00000474961 CCDC122Q5T0U0 273 aa10.07□□□□□ -0.8
DDX39B-217ENST00000474961 NAA35Q5VZE5 725 aa10.07□□□□□ -0.8
DDX39B-217ENST00000474961 PPP2R2DQ66LE6 453 aa10.07□□□□□ -0.8
DDX39B-217ENST00000474961 ALKBH5Q6P6C2 394 aaKnown RBP10.07□□□□□ -0.8
DDX39B-217ENST00000474961 TOGARAM2Q6ZUX3 1019 aa10.07□□□□□ -0.8
DDX39B-217ENST00000474961 TMC7Q7Z402 723 aa10.07□□□□□ -0.8
DDX39B-217ENST00000474961 TTC30AQ86WT1 665 aa10.07□□□□□ -0.8
DDX39B-217ENST00000474961 UBA3Q8TBC4 463 aa10.07□□□□□ -0.8
DDX39B-217ENST00000474961 POF1BQ8WVV4 589 aa10.07□□□□□ -0.8
DDX39B-217ENST00000474961 MYLPFQ96A32 169 aa10.07□□□□□ -0.8
DDX39B-217ENST00000474961 EIF3CQ99613 913 aaKnown RBP10.07□□□□□ -0.8
DDX39B-217ENST00000474961 CLSTN3Q9BQT9 956 aa10.07□□□□□ -0.8
DDX39B-217ENST00000474961 C11orf84Q9BUA3 381 aaPredicted RBP10.07□□□□□ -0.8
DDX39B-217ENST00000474961 LHX5Q9H2C1 402 aa10.07□□□□□ -0.8
DDX39B-217ENST00000474961 CERS4Q9HA82 394 aa10.07□□□□□ -0.8
DDX39B-217ENST00000474961 MRPL17Q9NRX2 175 aaKnown RBP10.07□□□□□ -0.8
DDX39B-217ENST00000474961 TAS2R14Q9NYV8 317 aa10.07□□□□□ -0.8
DDX39B-217ENST00000474961 HESX1Q9UBX0 185 aa10.07□□□□□ -0.8
DDX39B-217ENST00000474961 NAGPAQ9UK23 515 aa10.07□□□□□ -0.8
DDX39B-217ENST00000474961 PYCARDQ9ULZ3 195 aa10.07□□□□□ -0.8
DDX39B-217ENST00000474961 NENFQ9UMX5 172 aa10.07□□□□□ -0.8
DDX39B-217ENST00000474961 SSX2IPQ9Y2D8 614 aa10.07□□□□□ -0.8
DDX39B-217ENST00000474961 CDY1Q9Y6F8 540 aa10.07□□□□□ -0.8
DDX39B-217ENST00000474961 MYO7AQ13402 2215 aa10.07□□□□□ -0.8
DDX39B-217ENST00000474961 PATJQ8NI35 1801 aa10.07□□□□□ -0.8
DDX39B-217ENST00000474961 GREB1Q4ZG55 1949 aa10.06□□□□□ -0.8
DDX39B-217ENST00000474961 FAM170AA1A519 330 aa10.06□□□□□ -0.8
DDX39B-217ENST00000474961 TMCO5BA8MYB1 307 aa10.06□□□□□ -0.8
DDX39B-217ENST00000474961 H3BNC9 293 aa10.06□□□□□ -0.8
DDX39B-217ENST00000474961 GRM6O15303 877 aa10.06□□□□□ -0.8
DDX39B-217ENST00000474961 RTN2O75298 545 aa10.06□□□□□ -0.8
DDX39B-217ENST00000474961 LCA5LO95447 670 aa10.06□□□□□ -0.8
DDX39B-217ENST00000474961 LSM8O95777 96 aaKnown RBP10.06□□□□□ -0.8
DDX39B-217ENST00000474961 GZMAP12544 262 aa10.06□□□□□ -0.8
DDX39B-217ENST00000474961 UNGP13051 313 aaPredicted RBP10.06□□□□□ -0.8
DDX39B-217ENST00000474961 CPB1P15086 417 aa10.06□□□□□ -0.8
DDX39B-217ENST00000474961 BDNFP23560 247 aa10.06□□□□□ -0.8
DDX39B-217ENST00000474961 CDH5P33151 784 aaPredicted RBP10.06□□□□□ -0.8
DDX39B-217ENST00000474961 OR1D2P34982 312 aa10.06□□□□□ -0.8
DDX39B-217ENST00000474961 CA8P35219 290 aa10.06□□□□□ -0.8
DDX39B-217ENST00000474961 NOMO3P69849 1222 aa10.06□□□□□ -0.8
DDX39B-217ENST00000474961 GPR17Q13304 367 aa10.06□□□□□ -0.8
DDX39B-217ENST00000474961 SPA17Q15506 151 aa10.06□□□□□ -0.8
DDX39B-217ENST00000474961 PTPN14Q15678 1187 aa10.06□□□□□ -0.8
DDX39B-217ENST00000474961 NFE2Q16621 373 aaPredicted RBP10.06□□□□□ -0.8
DDX39B-217ENST00000474961 QPCTQ16769 361 aa10.06□□□□□ -0.8
DDX39B-217ENST00000474961 PKDCCQ504Y2 493 aa10.06□□□□□ -0.8
DDX39B-217ENST00000474961 SLC8B1Q6J4K2 584 aa10.06□□□□□ -0.8
DDX39B-217ENST00000474961 ACAD10Q6JQN1 1059 aa10.06□□□□□ -0.8
DDX39B-217ENST00000474961 C4orf50Q6ZRC1 276 aa10.06□□□□□ -0.8
DDX39B-217ENST00000474961 FAM35AQ86V20 835 aa10.06□□□□□ -0.8
DDX39B-217ENST00000474961 DNAAF5Q86Y56 855 aa10.06□□□□□ -0.8
DDX39B-217ENST00000474961 SPATA2LQ8IUW3 424 aaPredicted RBP10.06□□□□□ -0.8
DDX39B-217ENST00000474961 WDTC1Q8N5D0 677 aa10.06□□□□□ -0.8
DDX39B-217ENST00000474961 ANKRD52Q8NB46 1076 aa10.06□□□□□ -0.8
DDX39B-217ENST00000474961 TMEM35BQ8NCS4 154 aa10.06□□□□□ -0.8
DDX39B-217ENST00000474961 ACRBPQ8NEB7 543 aa10.06□□□□□ -0.8
DDX39B-217ENST00000474961 CPA5Q8WXQ8 436 aa10.06□□□□□ -0.8
DDX39B-217ENST00000474961 ARNTL2Q8WYA1 636 aa10.06□□□□□ -0.8
DDX39B-217ENST00000474961 SECISBP2LQ93073 1101 aaKnown RBP10.06□□□□□ -0.8
DDX39B-217ENST00000474961 TIFAQ96CG3 184 aa10.06□□□□□ -0.8
DDX39B-217ENST00000474961 TCF25Q9BQ70 676 aa10.06□□□□□ -0.8
DDX39B-217ENST00000474961 DESI2Q9BSY9 194 aa10.06□□□□□ -0.8
DDX39B-217ENST00000474961 DUSP16Q9BY84 665 aa10.06□□□□□ -0.8
DDX39B-217ENST00000474961 ZNF518BQ9C0D4 1074 aa10.06□□□□□ -0.8
DDX39B-217ENST00000474961 SLC28A3Q9HAS3 691 aa10.06□□□□□ -0.8
DDX39B-217ENST00000474961 RXFP1Q9HBX9 757 aa10.06□□□□□ -0.8
DDX39B-217ENST00000474961 ENTPD7Q9NQZ7 604 aa10.06□□□□□ -0.8
DDX39B-217ENST00000474961 TLR9Q9NR96 1032 aa10.06□□□□□ -0.8
DDX39B-217ENST00000474961 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.06□□□□□ -0.83e-7■■■□□ 15.3
DDX39B-217ENST00000474961 FNIP2Q9P278 1114 aa10.06□□□□□ -0.8
DDX39B-217ENST00000474961 REXO2Q9Y3B8 237 aaKnown RBP10.06□□□□□ -0.8
DDX39B-217ENST00000474961 CEP83Q9Y592 693 aa10.06□□□□□ -0.8
DDX39B-217ENST00000474961 PCDHB5Q9Y5E4 795 aa10.06□□□□□ -0.8
DDX39B-217ENST00000474961 ZNF638Q14966 1978 aaKnown RBP10.06□□□□□ -0.8
DDX39B-217ENST00000474961 ATP8B3O60423 1300 aa10.06□□□□□ -0.8
DDX39B-217ENST00000474961 COL4A4P53420 1690 aaPredicted RBP10.06□□□□□ -0.8
DDX39B-217ENST00000474961 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.05□□□□□ -0.8
DDX39B-217ENST00000474961 WDR27A2RRH5 827 aa10.05□□□□□ -0.8
DDX39B-217ENST00000474961 MTMR11A4FU01 709 aa10.05□□□□□ -0.8
DDX39B-217ENST00000474961 TULP2O00295 520 aa10.05□□□□□ -0.8
DDX39B-217ENST00000474961 FSCN2O14926 492 aa10.05□□□□□ -0.8
DDX39B-217ENST00000474961 AP1G2O75843 785 aa10.05□□□□□ -0.8
DDX39B-217ENST00000474961 CSPG5O95196 566 aa10.05□□□□□ -0.8
DDX39B-217ENST00000474961 IPO7O95373 1038 aaKnown RBP10.05□□□□□ -0.8
DDX39B-217ENST00000474961 VNN2O95498 520 aa10.05□□□□□ -0.8
DDX39B-217ENST00000474961 FTLP02792 175 aaPredicted RBP10.05□□□□□ -0.8
DDX39B-217ENST00000474961 CCNYL3P0C7X3 344 aa10.05□□□□□ -0.8
DDX39B-217ENST00000474961 FAM200BP0CF97 657 aa10.05□□□□□ -0.8
DDX39B-217ENST00000474961 SETSIPP0DME0 302 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms