RNA–Protein interactions for RNA: ENST00000474937.1

NIN-209, Transcript of ninein, humanhuman

TSL 3

Gene NIN, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIN-209ENST00000474937 K7ESF4 209 aa13.34□□□□□ -0.27
NIN-209ENST00000474937 PDXKO00764 312 aa13.34□□□□□ -0.27
NIN-209ENST00000474937 ARSAP15289 507 aa13.34□□□□□ -0.27
NIN-209ENST00000474937 TCF3P15923 654 aa13.34□□□□□ -0.27
NIN-209ENST00000474937 HDCP19113 662 aa13.34□□□□□ -0.27
NIN-209ENST00000474937 CNR2P34972 360 aa13.34□□□□□ -0.27
NIN-209ENST00000474937 CASP4P49662 377 aa13.34□□□□□ -0.27
NIN-209ENST00000474937 BIRC3Q13489 604 aa13.34□□□□□ -0.27
NIN-209ENST00000474937 KCNB1Q14721 858 aa13.34□□□□□ -0.27
NIN-209ENST00000474937 ZNF77Q15935 545 aa13.34□□□□□ -0.27
NIN-209ENST00000474937 TDRD10Q5VZ19 366 aaKnown RBP13.34□□□□□ -0.27
NIN-209ENST00000474937 CPA6Q8N4T0 437 aa13.34□□□□□ -0.27
NIN-209ENST00000474937 ARL14EPQ8N8R7 260 aaPredicted RBP13.34□□□□□ -0.27
NIN-209ENST00000474937 PLEKHO2Q8TD55 490 aa13.34□□□□□ -0.27
NIN-209ENST00000474937 ATP2A3Q93084 1043 aa13.34□□□□□ -0.27
NIN-209ENST00000474937 SLC22A12Q96S37 553 aa13.34□□□□□ -0.27
NIN-209ENST00000474937 ELOVL4Q9GZR5 314 aa13.34□□□□□ -0.27
NIN-209ENST00000474937 KCTD10Q9H3F6 313 aa13.34□□□□□ -0.27
NIN-209ENST00000474937 DUS2Q9NX74 493 aaKnown RBP13.34□□□□□ -0.27
NIN-209ENST00000474937 TRPM5Q9NZQ8 1165 aa13.34□□□□□ -0.27
NIN-209ENST00000474937 NXF1Q9UBU9 619 aaKnown RBP13.34□□□□□ -0.27
NIN-209ENST00000474937 ARHGAP26Q9UNA1 814 aa13.34□□□□□ -0.27
NIN-209ENST00000474937 ZDHHC9Q9Y397 364 aa13.34□□□□□ -0.27
NIN-209ENST00000474937 NME7Q9Y5B8 376 aa13.34□□□□□ -0.27
NIN-209ENST00000474937 ATP6V1DQ9Y5K8 247 aa13.34□□□□□ -0.27
NIN-209ENST00000474937 FAM237AA0A1B0GTK4 181 aa13.33□□□□□ -0.28
NIN-209ENST00000474937 LRRIQ3A6PVS8 624 aaPredicted RBP13.33□□□□□ -0.28
NIN-209ENST00000474937 A8MXQ7 604 aa13.33□□□□□ -0.28
NIN-209ENST00000474937 F8VP50 259 aa13.33□□□□□ -0.28
NIN-209ENST00000474937 ATG13O75143 517 aa13.33□□□□□ -0.28
NIN-209ENST00000474937 C4BPAP04003 597 aaKnown RBP13.33□□□□□ -0.28
NIN-209ENST00000474937 NR3C1P04150 777 aa13.33□□□□□ -0.28
NIN-209ENST00000474937 SYKP43405 635 aa13.33□□□□□ -0.28
NIN-209ENST00000474937 USP46P62068 366 aa13.33□□□□□ -0.28
NIN-209ENST00000474937 USP4Q13107 963 aa13.33□□□□□ -0.28
NIN-209ENST00000474937 NCOA4Q13772 614 aa13.33□□□□□ -0.28
NIN-209ENST00000474937 ZNF699Q32M78 642 aa13.33□□□□□ -0.28
NIN-209ENST00000474937 LAIR1Q6GTX8 287 aa13.33□□□□□ -0.28
NIN-209ENST00000474937 FSTL4Q6MZW2 842 aa13.33□□□□□ -0.28
NIN-209ENST00000474937 LONP2Q86WA8 852 aa13.33□□□□□ -0.28
NIN-209ENST00000474937 KIAA1958Q8N8K9 716 aa13.33□□□□□ -0.28
NIN-209ENST00000474937 B3GALNT2Q8NCR0 500 aa13.33□□□□□ -0.28
NIN-209ENST00000474937 TMC2Q8TDI7 906 aa13.33□□□□□ -0.28
NIN-209ENST00000474937 SH3RF2Q8TEC5 729 aa13.33□□□□□ -0.28
NIN-209ENST00000474937 RMDN1Q96DB5 314 aa13.33□□□□□ -0.28
NIN-209ENST00000474937 CHFRQ96EP1 664 aa13.33□□□□□ -0.28
NIN-209ENST00000474937 SCAND2PQ9GZW5 306 aaPredicted RBP13.33□□□□□ -0.28
NIN-209ENST00000474937 ECT2Q9H8V3 914 aa13.33□□□□□ -0.28
NIN-209ENST00000474937 GMEB2Q9UKD1 530 aa13.33□□□□□ -0.28
NIN-209ENST00000474937 DNAH14Q0VDD8 3507 aa13.33□□□□□ -0.28
NIN-209ENST00000474937 ZNF840PA6NDX5 716 aa13.32□□□□□ -0.28
NIN-209ENST00000474937 CHURC1-FNTBB4DL54 471 aa13.32□□□□□ -0.28
NIN-209ENST00000474937 IKBKBO14920 756 aa13.32□□□□□ -0.28
NIN-209ENST00000474937 HRO43593 1189 aa13.32□□□□□ -0.28
NIN-209ENST00000474937 KIF20AO95235 890 aa13.32□□□□□ -0.28
NIN-209ENST00000474937 RPN1P04843 607 aaKnown RBP13.32□□□□□ -0.28
NIN-209ENST00000474937 PRR29P0C7W0 189 aa13.32□□□□□ -0.28
NIN-209ENST00000474937 P4HA1P13674 534 aa13.32□□□□□ -0.28
NIN-209ENST00000474937 DRD1P21728 446 aa13.32□□□□□ -0.28
NIN-209ENST00000474937 GJA4P35212 333 aa13.32□□□□□ -0.28
NIN-209ENST00000474937 IFNAR2P48551 515 aa13.32□□□□□ -0.28
NIN-209ENST00000474937 FNTBP49356 437 aa13.32□□□□□ -0.28
NIN-209ENST00000474937 NDUFA8P51970 172 aa13.32□□□□□ -0.28
NIN-209ENST00000474937 NR1H3Q13133 447 aa13.32□□□□□ -0.28
NIN-209ENST00000474937 FBXO43Q4G163 708 aa13.32□□□□□ -0.28
NIN-209ENST00000474937 ZNF667Q5HYK9 610 aa13.32□□□□□ -0.28
NIN-209ENST00000474937 TAF4BQ92750 862 aa13.32□□□□□ -0.28
NIN-209ENST00000474937 CCDC47Q96A33 483 aaKnown RBP13.32□□□□□ -0.28
NIN-209ENST00000474937 TNIP3Q96KP6 325 aa13.32□□□□□ -0.28
NIN-209ENST00000474937 SLITRK1Q96PX8 696 aa13.32□□□□□ -0.28
NIN-209ENST00000474937 P2RY13Q9BPV8 354 aa13.32□□□□□ -0.28
NIN-209ENST00000474937 B3GNT5Q9BYG0 378 aa13.32□□□□□ -0.28
NIN-209ENST00000474937 ZNF518BQ9C0D4 1074 aa13.32□□□□□ -0.28
NIN-209ENST00000474937 DPEP3Q9H4B8 488 aa13.32□□□□□ -0.28
NIN-209ENST00000474937 SMYD3Q9H7B4 428 aa13.32□□□□□ -0.28
NIN-209ENST00000474937 C2orf42Q9NWW7 574 aa13.32□□□□□ -0.28
NIN-209ENST00000474937 FRMD4BQ9Y2L6 1034 aa13.32□□□□□ -0.28
NIN-209ENST00000474937 PTPRDP23468 1912 aa13.32□□□□□ -0.28
NIN-209ENST00000474937 GREB1Q4ZG55 1949 aa13.32□□□□□ -0.28
NIN-209ENST00000474937 SPTBN2O15020 2390 aa13.32□□□□□ -0.28
NIN-209ENST00000474937 ANAPC1Q9H1A4 1944 aa13.31□□□□□ -0.28
NIN-209ENST00000474937 CCDC163A0A0D9SF12 145 aa13.31□□□□□ -0.28
NIN-209ENST00000474937 A0A1W2PQ27 194 aa13.31□□□□□ -0.28
NIN-209ENST00000474937 A0A1W2PQ64 194 aa13.31□□□□□ -0.28
NIN-209ENST00000474937 A0A1W2PQD8 194 aa13.31□□□□□ -0.28
NIN-209ENST00000474937 MAPK13O15264 365 aa13.31□□□□□ -0.28
NIN-209ENST00000474937 CALUO43852 315 aaPredicted RBP13.31□□□□□ -0.28
NIN-209ENST00000474937 RHOBTB3O94955 611 aa13.31□□□□□ -0.28
NIN-209ENST00000474937 VNN1O95497 513 aa13.31□□□□□ -0.28
NIN-209ENST00000474937 SDHBP21912 280 aa13.31□□□□□ -0.28
NIN-209ENST00000474937 GALK1P51570 392 aa13.31□□□□□ -0.28
NIN-209ENST00000474937 CDH8P55286 799 aa13.31□□□□□ -0.28
NIN-209ENST00000474937 SLC7A9P82251 487 aa13.31□□□□□ -0.28
NIN-209ENST00000474937 DMWDQ09019 674 aa13.31□□□□□ -0.28
NIN-209ENST00000474937 TAF10Q12962 218 aa13.31□□□□□ -0.28
NIN-209ENST00000474937 SIM2Q14190 667 aaPredicted RBP13.31□□□□□ -0.28
NIN-209ENST00000474937 PUM1Q14671 1186 aaKnown RBP eCLIP13.31□□□□□ -0.28
NIN-209ENST00000474937 SGSM1Q2NKQ1 1148 aa13.31□□□□□ -0.28
NIN-209ENST00000474937 EML3Q32P44 896 aa13.31□□□□□ -0.28
NIN-209ENST00000474937 ZACNQ401N2 412 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms