RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 TRIM72Q6ZMU5 477 aa10.59□□□□□ -0.71
COL8A1-206ENST00000474648 CLEC20AQ6ZU45 233 aa10.59□□□□□ -0.71
COL8A1-206ENST00000474648 SPATA31D4Q6ZUB0 917 aa10.59□□□□□ -0.71
COL8A1-206ENST00000474648 DNAAF5Q86Y56 855 aa10.59□□□□□ -0.71
COL8A1-206ENST00000474648 CCDC170Q8IYT3 715 aa10.59□□□□□ -0.71
COL8A1-206ENST00000474648 SPPL2BQ8TCT7 592 aa10.59□□□□□ -0.71
COL8A1-206ENST00000474648 PTCD2Q8WV60 388 aaKnown RBP10.59□□□□□ -0.71
COL8A1-206ENST00000474648 CCDC42Q96M95 316 aa10.59□□□□□ -0.71
COL8A1-206ENST00000474648 KCNK16Q96T55 309 aa10.59□□□□□ -0.71
COL8A1-206ENST00000474648 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.59□□□□□ -0.71
COL8A1-206ENST00000474648 SLC4A5Q9BY07 1137 aa10.59□□□□□ -0.71
COL8A1-206ENST00000474648 PRDM12Q9H4Q4 367 aa10.59□□□□□ -0.71
COL8A1-206ENST00000474648 ABI2Q9NYB9 513 aaPredicted RBP10.59□□□□□ -0.71
COL8A1-206ENST00000474648 HSFX1Q9UBD0 423 aa10.59□□□□□ -0.71
COL8A1-206ENST00000474648 NAGPAQ9UK23 515 aa10.59□□□□□ -0.71
COL8A1-206ENST00000474648 EPN1Q9Y6I3 576 aaPredicted RBP10.59□□□□□ -0.71
COL8A1-206ENST00000474648 GBF1Q92538 1859 aa10.59□□□□□ -0.71
COL8A1-206ENST00000474648 TSC2P49815 1807 aa10.58□□□□□ -0.72
COL8A1-206ENST00000474648 M0QYV0 167 aa10.58□□□□□ -0.72
COL8A1-206ENST00000474648 SOAT2O75908 522 aa10.58□□□□□ -0.72
COL8A1-206ENST00000474648 LCA5LO95447 670 aa10.58□□□□□ -0.72
COL8A1-206ENST00000474648 LSM8O95777 96 aaKnown RBP10.58□□□□□ -0.72
COL8A1-206ENST00000474648 NUDT7P0C024 238 aa10.58□□□□□ -0.72
COL8A1-206ENST00000474648 FAM200BP0CF97 657 aa10.58□□□□□ -0.72
COL8A1-206ENST00000474648 SETSIPP0DME0 302 aa10.58□□□□□ -0.72
COL8A1-206ENST00000474648 GZMAP12544 262 aa10.58□□□□□ -0.72
COL8A1-206ENST00000474648 NPR3P17342 541 aa10.58□□□□□ -0.72
COL8A1-206ENST00000474648 POU3F3P20264 500 aaPredicted RBP10.58□□□□□ -0.72
COL8A1-206ENST00000474648 CA8P35219 290 aa10.58□□□□□ -0.72
COL8A1-206ENST00000474648 GPR15P49685 360 aa10.58□□□□□ -0.72
COL8A1-206ENST00000474648 KIF11P52732 1056 aa10.58□□□□□ -0.72
COL8A1-206ENST00000474648 BCAT1P54687 386 aa10.58□□□□□ -0.72
COL8A1-206ENST00000474648 MAP3K7CLP57077 242 aa10.58□□□□□ -0.72
COL8A1-206ENST00000474648 GFPT1Q06210 699 aaPredicted RBP10.58□□□□□ -0.72
COL8A1-206ENST00000474648 BST2Q10589 180 aaKnown RBP10.58□□□□□ -0.72
COL8A1-206ENST00000474648 PTP4A2Q12974 167 aa10.58□□□□□ -0.72
COL8A1-206ENST00000474648 ADGRE1Q14246 886 aa10.58□□□□□ -0.72
COL8A1-206ENST00000474648 SLC18A3Q16572 532 aa10.58□□□□□ -0.72
COL8A1-206ENST00000474648 PTPROQ16827 1216 aa10.58□□□□□ -0.72
COL8A1-206ENST00000474648 DUSP6Q16828 381 aa10.58□□□□□ -0.72
COL8A1-206ENST00000474648 DDR2Q16832 855 aa10.58□□□□□ -0.72
COL8A1-206ENST00000474648 NAA35Q5VZE5 725 aa10.58□□□□□ -0.72
COL8A1-206ENST00000474648 ACAD10Q6JQN1 1059 aa10.58□□□□□ -0.72
COL8A1-206ENST00000474648 VSTM1Q6UX27 236 aa10.58□□□□□ -0.72
COL8A1-206ENST00000474648 RBM23Q86U06 439 aaKnown RBP10.58□□□□□ -0.72
COL8A1-206ENST00000474648 TCEAL8Q8IYN2 117 aa10.58□□□□□ -0.72
COL8A1-206ENST00000474648 TMEM35BQ8NCS4 154 aa10.58□□□□□ -0.72
COL8A1-206ENST00000474648 C1orf131Q8NDD1 294 aaKnown RBP10.58□□□□□ -0.72
COL8A1-206ENST00000474648 STK32AQ8WU08 396 aa10.58□□□□□ -0.72
COL8A1-206ENST00000474648 CPA5Q8WXQ8 436 aa10.58□□□□□ -0.72
COL8A1-206ENST00000474648 SMARCD1Q96GM5 515 aa10.58□□□□□ -0.72
COL8A1-206ENST00000474648 C8orf48Q96LL4 319 aa10.58□□□□□ -0.72
COL8A1-206ENST00000474648 HS3ST6Q96QI5 342 aa10.58□□□□□ -0.72
COL8A1-206ENST00000474648 ISCUQ9H1K1 167 aa10.58□□□□□ -0.72
COL8A1-206ENST00000474648 PDCL3Q9H2J4 239 aa10.58□□□□□ -0.72
COL8A1-206ENST00000474648 KRT82Q9NSB4 513 aa10.58□□□□□ -0.72
COL8A1-206ENST00000474648 SPTLC3Q9NUV7 552 aa10.58□□□□□ -0.72
COL8A1-206ENST00000474648 LMCD1Q9NZU5 365 aa10.58□□□□□ -0.72
COL8A1-206ENST00000474648 HESX1Q9UBX0 185 aa10.58□□□□□ -0.72
COL8A1-206ENST00000474648 REXO2Q9Y3B8 237 aaKnown RBP10.58□□□□□ -0.72
COL8A1-206ENST00000474648 TRANK1O15050 2925 aa10.58□□□□□ -0.72
COL8A1-206ENST00000474648 MYO7AQ13402 2215 aa10.58□□□□□ -0.72
COL8A1-206ENST00000474648 ATP8B3O60423 1300 aa10.58□□□□□ -0.72
COL8A1-206ENST00000474648 PLXNA4Q9HCM2 1894 aa10.57□□□□□ -0.72
COL8A1-206ENST00000474648 FAM170AA1A519 330 aa10.57□□□□□ -0.72
COL8A1-206ENST00000474648 EIF3CLB5ME19 914 aaKnown RBP10.57□□□□□ -0.72
COL8A1-206ENST00000474648 F8VP50 259 aa10.57□□□□□ -0.72
COL8A1-206ENST00000474648 TNFRSF10BO14763 440 aa10.57□□□□□ -0.72
COL8A1-206ENST00000474648 XPO1O14980 1071 aaKnown RBP10.57□□□□□ -0.72
COL8A1-206ENST00000474648 AKR1B10O60218 316 aa10.57□□□□□ -0.72
COL8A1-206ENST00000474648 NDUFA10O95299 355 aa10.57□□□□□ -0.72
COL8A1-206ENST00000474648 FTLP02792 175 aaPredicted RBP10.57□□□□□ -0.72
COL8A1-206ENST00000474648 MMP8P22894 467 aa10.57□□□□□ -0.72
COL8A1-206ENST00000474648 GTF2F1P35269 517 aaKnown RBP eCLIP10.57□□□□□ -0.72
COL8A1-206ENST00000474648 GRIK1P39086 918 aa10.57□□□□□ -0.72
COL8A1-206ENST00000474648 PLA2G4AP47712 749 aa10.57□□□□□ -0.72
COL8A1-206ENST00000474648 TUFMP49411 452 aaKnown RBP10.57□□□□□ -0.72
COL8A1-206ENST00000474648 RGS7P49802 495 aa10.57□□□□□ -0.72
COL8A1-206ENST00000474648 CENPCQ03188 943 aa10.57□□□□□ -0.72
COL8A1-206ENST00000474648 PDCLQ13371 301 aa10.57□□□□□ -0.72
COL8A1-206ENST00000474648 KCNC3Q14003 757 aa10.57□□□□□ -0.72
COL8A1-206ENST00000474648 RAB41Q5JT25 222 aa10.57□□□□□ -0.72
COL8A1-206ENST00000474648 CCDC122Q5T0U0 273 aa10.57□□□□□ -0.72
COL8A1-206ENST00000474648 SDHAF4Q5VUM1 108 aa10.57□□□□□ -0.72
COL8A1-206ENST00000474648 ALKBH5Q6P6C2 394 aaKnown RBP10.57□□□□□ -0.72
COL8A1-206ENST00000474648 TMEM110Q86TL2 294 aa10.57□□□□□ -0.72
COL8A1-206ENST00000474648 PIGZQ86VD9 579 aa10.57□□□□□ -0.72
COL8A1-206ENST00000474648 VPS36Q86VN1 386 aa10.57□□□□□ -0.72
COL8A1-206ENST00000474648 PHF13Q86YI8 300 aaPredicted RBP10.57□□□□□ -0.72
COL8A1-206ENST00000474648 SCN4BQ8IWT1 228 aa10.57□□□□□ -0.72
COL8A1-206ENST00000474648 KREMEN2Q8NCW0 462 aa10.57□□□□□ -0.72
COL8A1-206ENST00000474648 CCDC112Q8NEF3 446 aa10.57□□□□□ -0.72
COL8A1-206ENST00000474648 KCTD13Q8WZ19 329 aa10.57□□□□□ -0.72
COL8A1-206ENST00000474648 SPATA17Q96L03 361 aa10.57□□□□□ -0.72
COL8A1-206ENST00000474648 HSFY1Q96LI6 401 aa10.57□□□□□ -0.72
COL8A1-206ENST00000474648 EIF3CQ99613 913 aaKnown RBP10.57□□□□□ -0.72
COL8A1-206ENST00000474648 TLE6Q9H808 572 aa10.57□□□□□ -0.72
COL8A1-206ENST00000474648 CYP4F11Q9HBI6 524 aa10.57□□□□□ -0.72
COL8A1-206ENST00000474648 DMAP1Q9NPF5 467 aaPredicted RBP10.57□□□□□ -0.72
COL8A1-206ENST00000474648 SEPT11Q9NVA2 429 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms