RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 RTN3O95197 1032 aaPredicted RBP10.91□□□□□ -0.66
COL12A1-206ENST00000474564 EFEMP2O95967 443 aa10.91□□□□□ -0.66
COL12A1-206ENST00000474564 CALCAP01258 141 aa10.91□□□□□ -0.66
COL12A1-206ENST00000474564 SRGAP2BP0DMP2 458 aa10.91□□□□□ -0.66
COL12A1-206ENST00000474564 MYOGP15173 224 aa10.91□□□□□ -0.66
COL12A1-206ENST00000474564 MMP8P22894 467 aa10.91□□□□□ -0.66
COL12A1-206ENST00000474564 SSTR3P32745 418 aaPredicted RBP10.91□□□□□ -0.66
COL12A1-206ENST00000474564 GPD2P43304 727 aa10.91□□□□□ -0.66
COL12A1-206ENST00000474564 PLA2G4AP47712 749 aa10.91□□□□□ -0.66
COL12A1-206ENST00000474564 EPHB3P54753 998 aa10.91□□□□□ -0.66
COL12A1-206ENST00000474564 ROR1Q01973 937 aa10.91□□□□□ -0.66
COL12A1-206ENST00000474564 ADCY1Q08828 1119 aa10.91□□□□□ -0.66
COL12A1-206ENST00000474564 PDCLQ13371 301 aa10.91□□□□□ -0.66
COL12A1-206ENST00000474564 EFHC1Q5JVL4 640 aa10.91□□□□□ -0.66
COL12A1-206ENST00000474564 OR6B2Q6IFH4 312 aa10.91□□□□□ -0.66
COL12A1-206ENST00000474564 DNAJC24Q6P3W2 148 aa10.91□□□□□ -0.66
COL12A1-206ENST00000474564 MMS22LQ6ZRQ5 1243 aa10.91□□□□□ -0.66
COL12A1-206ENST00000474564 ZNF662Q6ZS27 426 aa10.91□□□□□ -0.66
COL12A1-206ENST00000474564 ITIH5Q86UX2 942 aa10.91□□□□□ -0.66
COL12A1-206ENST00000474564 SYCE1Q8N0S2 351 aa10.91□□□□□ -0.66
COL12A1-206ENST00000474564 ARHGAP18Q8N392 663 aa10.91□□□□□ -0.66
COL12A1-206ENST00000474564 SLC35F5Q8WV83 523 aa10.91□□□□□ -0.66
COL12A1-206ENST00000474564 ARNTL2Q8WYA1 636 aa10.91□□□□□ -0.66
COL12A1-206ENST00000474564 KCTD13Q8WZ19 329 aa10.91□□□□□ -0.66
COL12A1-206ENST00000474564 C8orf48Q96LL4 319 aa10.91□□□□□ -0.66
COL12A1-206ENST00000474564 PGLYRP2Q96PD5 576 aa10.91□□□□□ -0.66
COL12A1-206ENST00000474564 SEPT5Q99719 369 aaPredicted RBP10.91□□□□□ -0.66
COL12A1-206ENST00000474564 NCAPGQ9BPX3 1015 aa10.91□□□□□ -0.66
COL12A1-206ENST00000474564 RTP3Q9BQQ7 232 aa10.91□□□□□ -0.66
COL12A1-206ENST00000474564 C11orf70Q9BRQ4 267 aa10.91□□□□□ -0.66
COL12A1-206ENST00000474564 CYP4F11Q9HBI6 524 aa10.91□□□□□ -0.66
COL12A1-206ENST00000474564 RXFP1Q9HBX9 757 aa10.91□□□□□ -0.66
COL12A1-206ENST00000474564 AVENQ9NQS1 362 aaPredicted RBP10.91□□□□□ -0.66
COL12A1-206ENST00000474564 TMEM51Q9NW97 253 aa10.91□□□□□ -0.66
COL12A1-206ENST00000474564 PCDH10Q9P2E7 1040 aa10.91□□□□□ -0.66
COL12A1-206ENST00000474564 GUCA1BQ9UMX6 200 aa10.91□□□□□ -0.66
COL12A1-206ENST00000474564 A0A0A6YYK5 440 aaPredicted RBP10.9□□□□□ -0.66
COL12A1-206ENST00000474564 USP27XA6NNY8 438 aa10.9□□□□□ -0.66
COL12A1-206ENST00000474564 MYO1FO00160 1098 aa10.9□□□□□ -0.66
COL12A1-206ENST00000474564 PJA2O43164 708 aa10.9□□□□□ -0.66
COL12A1-206ENST00000474564 HCRTO43612 131 aa10.9□□□□□ -0.66
COL12A1-206ENST00000474564 TBC1D4O60343 1298 aa10.9□□□□□ -0.66
COL12A1-206ENST00000474564 GLUD1P00367 558 aa10.9□□□□□ -0.66
COL12A1-206ENST00000474564 LRG1P02750 347 aa10.9□□□□□ -0.66
COL12A1-206ENST00000474564 OR4Q2P0C623 313 aa10.9□□□□□ -0.66
COL12A1-206ENST00000474564 KRT3P12035 628 aa10.9□□□□□ -0.66
COL12A1-206ENST00000474564 LCP1P13796 627 aa10.9□□□□□ -0.66
COL12A1-206ENST00000474564 ATF2P15336 505 aa10.9□□□□□ -0.66
COL12A1-206ENST00000474564 RGS7P49802 495 aa10.9□□□□□ -0.66
COL12A1-206ENST00000474564 DUSP4Q13115 394 aa10.9□□□□□ -0.66
COL12A1-206ENST00000474564 PLPP4Q5VZY2 271 aa10.9□□□□□ -0.66
COL12A1-206ENST00000474564 RNF19BQ6ZMZ0 732 aa10.9□□□□□ -0.66
COL12A1-206ENST00000474564 CLEC20AQ6ZU45 233 aa10.9□□□□□ -0.66
COL12A1-206ENST00000474564 TMEM110Q86TL2 294 aa10.9□□□□□ -0.66
COL12A1-206ENST00000474564 PIGZQ86VD9 579 aa10.9□□□□□ -0.66
COL12A1-206ENST00000474564 LRRTM3Q86VH5 581 aa10.9□□□□□ -0.66
COL12A1-206ENST00000474564 TTC30AQ86WT1 665 aa10.9□□□□□ -0.66
COL12A1-206ENST00000474564 PALB2Q86YC2 1186 aa10.9□□□□□ -0.66
COL12A1-206ENST00000474564 NUP93Q8N1F7 819 aa10.9□□□□□ -0.66
COL12A1-206ENST00000474564 RFFLQ8WZ73 363 aa10.9□□□□□ -0.66
COL12A1-206ENST00000474564 CLSTN3Q9BQT9 956 aa10.9□□□□□ -0.66
COL12A1-206ENST00000474564 SLC4A5Q9BY07 1137 aa10.9□□□□□ -0.66
COL12A1-206ENST00000474564 CSNK1G1Q9HCP0 422 aa10.9□□□□□ -0.66
COL12A1-206ENST00000474564 CNGB3Q9NQW8 809 aa10.9□□□□□ -0.66
COL12A1-206ENST00000474564 KCND1Q9NSA2 647 aa10.9□□□□□ -0.66
COL12A1-206ENST00000474564 YBX2Q9Y2T7 364 aaKnown RBP10.9□□□□□ -0.66
COL12A1-206ENST00000474564 TMEM265A0A087WTH1 108 aa10.89□□□□□ -0.67
COL12A1-206ENST00000474564 MTMR11A4FU01 709 aa10.89□□□□□ -0.67
COL12A1-206ENST00000474564 BTNL10A8MVZ5 291 aa10.89□□□□□ -0.67
COL12A1-206ENST00000474564 CAPN9O14815 690 aa10.89□□□□□ -0.67
COL12A1-206ENST00000474564 TEX28O15482 410 aa10.89□□□□□ -0.67
COL12A1-206ENST00000474564 ABLIM3O94929 683 aa10.89□□□□□ -0.67
COL12A1-206ENST00000474564 GLI1P08151 1106 aa10.89□□□□□ -0.67
COL12A1-206ENST00000474564 CNPP09543 421 aaKnown RBP10.89□□□□□ -0.67
COL12A1-206ENST00000474564 CSH1P0DML2 217 aa10.89□□□□□ -0.67
COL12A1-206ENST00000474564 CSH2P0DML3 217 aa10.89□□□□□ -0.67
COL12A1-206ENST00000474564 HAPLN1P10915 354 aaPredicted RBP10.89□□□□□ -0.67
COL12A1-206ENST00000474564 RPL17P18621 184 aaKnown RBP10.89□□□□□ -0.67
COL12A1-206ENST00000474564 CYP2F1P24903 491 aa10.89□□□□□ -0.67
COL12A1-206ENST00000474564 CASQ1P31415 396 aa10.89□□□□□ -0.67
COL12A1-206ENST00000474564 SCNN1AP37088 669 aa10.89□□□□□ -0.67
COL12A1-206ENST00000474564 PBX2P40425 430 aa10.89□□□□□ -0.67
COL12A1-206ENST00000474564 ARHGAP25P42331 645 aa10.89□□□□□ -0.67
COL12A1-206ENST00000474564 GABRB2P47870 512 aa10.89□□□□□ -0.67
COL12A1-206ENST00000474564 PSEN1P49768 467 aa10.89□□□□□ -0.67
COL12A1-206ENST00000474564 TKTL1P51854 596 aa10.89□□□□□ -0.67
COL12A1-206ENST00000474564 PKDCCQ504Y2 493 aa10.89□□□□□ -0.67
COL12A1-206ENST00000474564 FAM102AQ5T9C2 384 aaPredicted RBP10.89□□□□□ -0.67
COL12A1-206ENST00000474564 FAM109BQ6ICB4 259 aaPredicted RBP10.89□□□□□ -0.67
COL12A1-206ENST00000474564 PMF1Q6P1K2 205 aa10.89□□□□□ -0.67
COL12A1-206ENST00000474564 DENND5BQ6ZUT9 1274 aa10.89□□□□□ -0.67
COL12A1-206ENST00000474564 TADA2BQ86TJ2 420 aa10.89□□□□□ -0.67
COL12A1-206ENST00000474564 TCEAL8Q8IYN2 117 aa10.89□□□□□ -0.67
COL12A1-206ENST00000474564 ATAD1Q8NBU5 361 aa10.89□□□□□ -0.67
COL12A1-206ENST00000474564 C3orf20Q8ND61 904 aa10.89□□□□□ -0.67
COL12A1-206ENST00000474564 TRIM58Q8NG06 486 aa10.89□□□□□ -0.67
COL12A1-206ENST00000474564 KIF18AQ8NI77 898 aa10.89□□□□□ -0.67
COL12A1-206ENST00000474564 HDAC7Q8WUI4 952 aa10.89□□□□□ -0.67
COL12A1-206ENST00000474564 IRGQQ8WZA9 623 aa10.89□□□□□ -0.67
COL12A1-206ENST00000474564 SPATA17Q96L03 361 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms