RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 B3GALNT2Q8NCR0 500 aa21.7■■□□□ 1.06
PDLIM4-206ENST00000474421 OSCP1Q8WVF1 389 aa21.7■■□□□ 1.06
PDLIM4-206ENST00000474421 ATP2A3Q93084 1043 aa21.7■■□□□ 1.06
PDLIM4-206ENST00000474421 CYP2S1Q96SQ9 504 aa21.7■■□□□ 1.06
PDLIM4-206ENST00000474421 TTLL2Q9BWV7 592 aa21.7■■□□□ 1.06
PDLIM4-206ENST00000474421 DUS2Q9NX74 493 aaKnown RBP21.7■■□□□ 1.06
PDLIM4-206ENST00000474421 GCNT4Q9P109 453 aa21.7■■□□□ 1.06
PDLIM4-206ENST00000474421 GMEB2Q9UKD1 530 aa21.7■■□□□ 1.06
PDLIM4-206ENST00000474421 ARHGAP26Q9UNA1 814 aa21.7■■□□□ 1.06
PDLIM4-206ENST00000474421 HELZP42694 1942 aaKnown RBP21.69■■□□□ 1.06
PDLIM4-206ENST00000474421 ATG13O75143 517 aa21.69■■□□□ 1.06
PDLIM4-206ENST00000474421 CLSTN1O94985 981 aa21.69■■□□□ 1.06
PDLIM4-206ENST00000474421 P4HA1P13674 534 aa21.69■■□□□ 1.06
PDLIM4-206ENST00000474421 TCF3P15923 654 aa21.69■■□□□ 1.06
PDLIM4-206ENST00000474421 HOXA6P31267 233 aa21.69■■□□□ 1.06
PDLIM4-206ENST00000474421 IFNAR2P48551 515 aa21.69■■□□□ 1.06
PDLIM4-206ENST00000474421 CASP4P49662 377 aa21.69■■□□□ 1.06
PDLIM4-206ENST00000474421 USP4Q13107 963 aa21.69■■□□□ 1.06
PDLIM4-206ENST00000474421 NCOA4Q13772 614 aa21.69■■□□□ 1.06
PDLIM4-206ENST00000474421 ZNF667Q5HYK9 610 aa21.69■■□□□ 1.06
PDLIM4-206ENST00000474421 TDRD10Q5VZ19 366 aaKnown RBP21.69■■□□□ 1.06
PDLIM4-206ENST00000474421 LONP2Q86WA8 852 aa21.69■■□□□ 1.06
PDLIM4-206ENST00000474421 ARL14EPQ8N8R7 260 aaPredicted RBP21.69■■□□□ 1.06
PDLIM4-206ENST00000474421 SLC22A12Q96S37 553 aa21.69■■□□□ 1.06
PDLIM4-206ENST00000474421 SCAND2PQ9GZW5 306 aaPredicted RBP21.69■■□□□ 1.06
PDLIM4-206ENST00000474421 KCTD10Q9H3F6 313 aa21.69■■□□□ 1.06
PDLIM4-206ENST00000474421 FRMD4BQ9Y2L6 1034 aa21.69■■□□□ 1.06
PDLIM4-206ENST00000474421 ATP8B3O60423 1300 aa21.69■■□□□ 1.06
PDLIM4-206ENST00000474421 FAM237AA0A1B0GTK4 181 aa21.68■■□□□ 1.06
PDLIM4-206ENST00000474421 C2orf78A6NCI8 922 aa21.68■■□□□ 1.06
PDLIM4-206ENST00000474421 LRRIQ3A6PVS8 624 aaPredicted RBP21.68■■□□□ 1.06
PDLIM4-206ENST00000474421 F8VP50 259 aa21.68■■□□□ 1.06
PDLIM4-206ENST00000474421 K7ESF4 209 aa21.68■■□□□ 1.06
PDLIM4-206ENST00000474421 CALUO43852 315 aaPredicted RBP21.68■■□□□ 1.06
PDLIM4-206ENST00000474421 NR3C1P04150 777 aa21.68■■□□□ 1.06
PDLIM4-206ENST00000474421 RPN1P04843 607 aaKnown RBP21.68■■□□□ 1.06
PDLIM4-206ENST00000474421 ARSAP15289 507 aa21.68■■□□□ 1.06
PDLIM4-206ENST00000474421 DRD1P21728 446 aa21.68■■□□□ 1.06
PDLIM4-206ENST00000474421 NR1H3Q13133 447 aa21.68■■□□□ 1.06
PDLIM4-206ENST00000474421 KIAA1958Q8N8K9 716 aa21.68■■□□□ 1.06
PDLIM4-206ENST00000474421 RIN3Q8TB24 985 aa21.68■■□□□ 1.06
PDLIM4-206ENST00000474421 SH3RF2Q8TEC5 729 aa21.68■■□□□ 1.06
PDLIM4-206ENST00000474421 TNIP3Q96KP6 325 aa21.68■■□□□ 1.06
PDLIM4-206ENST00000474421 ECT2Q9H8V3 914 aa21.68■■□□□ 1.06
PDLIM4-206ENST00000474421 OTOL1A6NHN0 477 aaPredicted RBP21.67■■□□□ 1.06
PDLIM4-206ENST00000474421 CHURC1-FNTBB4DL54 471 aa21.67■■□□□ 1.06
PDLIM4-206ENST00000474421 C4BPAP04003 597 aaKnown RBP21.67■■□□□ 1.06
PDLIM4-206ENST00000474421 FNTBP49356 437 aa21.67■■□□□ 1.06
PDLIM4-206ENST00000474421 FBXO43Q4G163 708 aa21.67■■□□□ 1.06
PDLIM4-206ENST00000474421 LAIR1Q6GTX8 287 aa21.67■■□□□ 1.06
PDLIM4-206ENST00000474421 FSTL4Q6MZW2 842 aa21.67■■□□□ 1.06
PDLIM4-206ENST00000474421 TTC16Q8NEE8 873 aa21.67■■□□□ 1.06
PDLIM4-206ENST00000474421 PLEKHO2Q8TD55 490 aa21.67■■□□□ 1.06
PDLIM4-206ENST00000474421 TMC2Q8TDI7 906 aa21.67■■□□□ 1.06
PDLIM4-206ENST00000474421 SLITRK1Q96PX8 696 aa21.67■■□□□ 1.06
PDLIM4-206ENST00000474421 DPEP3Q9H4B8 488 aa21.67■■□□□ 1.06
PDLIM4-206ENST00000474421 ZDHHC9Q9Y397 364 aa21.67■■□□□ 1.06
PDLIM4-206ENST00000474421 NME7Q9Y5B8 376 aa21.67■■□□□ 1.06
PDLIM4-206ENST00000474421 CEP250Q9BV73 2442 aa21.67■■□□□ 1.06
PDLIM4-206ENST00000474421 ZNF840PA6NDX5 716 aa21.66■■□□□ 1.06
PDLIM4-206ENST00000474421 IKBKBO14920 756 aa21.66■■□□□ 1.06
PDLIM4-206ENST00000474421 SDHBP21912 280 aa21.66■■□□□ 1.06
PDLIM4-206ENST00000474421 GJA4P35212 333 aa21.66■■□□□ 1.06
PDLIM4-206ENST00000474421 NDUFA8P51970 172 aa21.66■■□□□ 1.06
PDLIM4-206ENST00000474421 USP46P62068 366 aa21.66■■□□□ 1.06
PDLIM4-206ENST00000474421 SGSM1Q2NKQ1 1148 aa21.66■■□□□ 1.06
PDLIM4-206ENST00000474421 TAF4BQ92750 862 aa21.66■■□□□ 1.06
PDLIM4-206ENST00000474421 CCDC34Q96HJ3 373 aa21.66■■□□□ 1.06
PDLIM4-206ENST00000474421 P2RY13Q9BPV8 354 aa21.66■■□□□ 1.06
PDLIM4-206ENST00000474421 B3GNT5Q9BYG0 378 aa21.66■■□□□ 1.06
PDLIM4-206ENST00000474421 ZNF518BQ9C0D4 1074 aa21.66■■□□□ 1.06
PDLIM4-206ENST00000474421 SMYD3Q9H7B4 428 aa21.66■■□□□ 1.06
PDLIM4-206ENST00000474421 A0A1W2PQ27 194 aa21.65■■□□□ 1.06
PDLIM4-206ENST00000474421 A0A1W2PQ64 194 aa21.65■■□□□ 1.06
PDLIM4-206ENST00000474421 A0A1W2PQD8 194 aa21.65■■□□□ 1.06
PDLIM4-206ENST00000474421 MAPK13O15264 365 aa21.65■■□□□ 1.06
PDLIM4-206ENST00000474421 RHOBTB3O94955 611 aa21.65■■□□□ 1.06
PDLIM4-206ENST00000474421 RTN3O95197 1032 aaPredicted RBP21.65■■□□□ 1.06
PDLIM4-206ENST00000474421 NFATC1O95644 943 aa21.65■■□□□ 1.06
PDLIM4-206ENST00000474421 SLC7A9P82251 487 aa21.65■■□□□ 1.06
PDLIM4-206ENST00000474421 SIM2Q14190 667 aaPredicted RBP21.65■■□□□ 1.06
PDLIM4-206ENST00000474421 PUM1Q14671 1186 aaKnown RBP eCLIP21.65■■□□□ 1.06
PDLIM4-206ENST00000474421 EML3Q32P44 896 aa21.65■■□□□ 1.06
PDLIM4-206ENST00000474421 ZACNQ401N2 412 aa21.65■■□□□ 1.06
PDLIM4-206ENST00000474421 CEP135Q66GS9 1140 aa21.65■■□□□ 1.06
PDLIM4-206ENST00000474421 PRR23BQ6ZRT6 265 aa21.65■■□□□ 1.06
PDLIM4-206ENST00000474421 NUP93Q8N1F7 819 aa21.65■■□□□ 1.06
PDLIM4-206ENST00000474421 CCDC26Q8TAB7 109 aa21.65■■□□□ 1.06
PDLIM4-206ENST00000474421 RMDN1Q96DB5 314 aa21.65■■□□□ 1.06
PDLIM4-206ENST00000474421 CHFRQ96EP1 664 aa21.65■■□□□ 1.06
PDLIM4-206ENST00000474421 TRAF3IP3Q9Y228 551 aa21.65■■□□□ 1.06
PDLIM4-206ENST00000474421 WNT6Q9Y6F9 365 aa21.65■■□□□ 1.06
PDLIM4-206ENST00000474421 ATG2BQ96BY7 2078 aa21.65■■□□□ 1.06
PDLIM4-206ENST00000474421 TRIM21P19474 475 aaKnown RBP21.64■■□□□ 1.05
PDLIM4-206ENST00000474421 YWHAQP27348 245 aa21.64■■□□□ 1.05
PDLIM4-206ENST00000474421 GALK1P51570 392 aa21.64■■□□□ 1.05
PDLIM4-206ENST00000474421 CDH8P55286 799 aa21.64■■□□□ 1.05
PDLIM4-206ENST00000474421 LMNB2Q03252 620 aa21.64■■□□□ 1.05
PDLIM4-206ENST00000474421 TAF10Q12962 218 aa21.64■■□□□ 1.05
PDLIM4-206ENST00000474421 NFIL3Q16649 462 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms