RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 MCEEQ96PE7 176 aa10.82□□□□□ -0.68
PRPF38A-202ENST00000474048 TGS1Q96RS0 853 aaKnown RBP10.82□□□□□ -0.68
PRPF38A-202ENST00000474048 CPXM1Q96SM3 734 aa10.82□□□□□ -0.68
PRPF38A-202ENST00000474048 SEPT5Q99719 369 aaPredicted RBP10.82□□□□□ -0.68
PRPF38A-202ENST00000474048 ZSWIM1Q9BR11 485 aa10.82□□□□□ -0.68
PRPF38A-202ENST00000474048 ABCB6Q9NP58 842 aa10.82□□□□□ -0.68
PRPF38A-202ENST00000474048 METTL5Q9NRN9 209 aaKnown RBP10.82□□□□□ -0.68
PRPF38A-202ENST00000474048 PCDH10Q9P2E7 1040 aa10.82□□□□□ -0.68
PRPF38A-202ENST00000474048 MTRRQ9UBK8 725 aa10.82□□□□□ -0.68
PRPF38A-202ENST00000474048 IP6K2Q9UHH9 426 aa10.82□□□□□ -0.68
PRPF38A-202ENST00000474048 AMFRQ9UKV5 643 aa10.82□□□□□ -0.68
PRPF38A-202ENST00000474048 MTUS1Q9ULD2 1270 aa10.82□□□□□ -0.68
PRPF38A-202ENST00000474048 NENFQ9UMX5 172 aa10.82□□□□□ -0.68
PRPF38A-202ENST00000474048 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.82□□□□□ -0.68
PRPF38A-202ENST00000474048 PCDHA11Q9Y5I1 949 aa10.82□□□□□ -0.68
PRPF38A-202ENST00000474048 BACE2Q9Y5Z0 518 aa10.82□□□□□ -0.68
PRPF38A-202ENST00000474048 VWA8A3KMH1 1905 aa10.82□□□□□ -0.68
PRPF38A-202ENST00000474048 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.81□□□□□ -0.68
PRPF38A-202ENST00000474048 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.81□□□□□ -0.68
PRPF38A-202ENST00000474048 RCCD1A6NED2 376 aa10.81□□□□□ -0.68
PRPF38A-202ENST00000474048 PIK3R2O00459 728 aa10.81□□□□□ -0.68
PRPF38A-202ENST00000474048 PRRG1O14668 218 aa10.81□□□□□ -0.68
PRPF38A-202ENST00000474048 CAPN9O14815 690 aa10.81□□□□□ -0.68
PRPF38A-202ENST00000474048 PALMO75781 387 aa10.81□□□□□ -0.68
PRPF38A-202ENST00000474048 RNF8O76064 485 aa10.81□□□□□ -0.68
PRPF38A-202ENST00000474048 RB1P06400 928 aa10.81□□□□□ -0.68
PRPF38A-202ENST00000474048 ADH1AP07327 375 aa10.81□□□□□ -0.68
PRPF38A-202ENST00000474048 OR1D2P34982 312 aa10.81□□□□□ -0.68
PRPF38A-202ENST00000474048 BMPR1AP36894 532 aa10.81□□□□□ -0.68
PRPF38A-202ENST00000474048 TUFMP49411 452 aaKnown RBP10.81□□□□□ -0.68
PRPF38A-202ENST00000474048 NDUFV1P49821 464 aa10.81□□□□□ -0.68
PRPF38A-202ENST00000474048 RABGGTBP53611 331 aa10.81□□□□□ -0.68
PRPF38A-202ENST00000474048 UBE3AQ05086 875 aa10.81□□□□□ -0.68
PRPF38A-202ENST00000474048 ADIGQ0VDE8 80 aa10.81□□□□□ -0.68
PRPF38A-202ENST00000474048 IFRD2Q12894 506 aaPredicted RBP10.81□□□□□ -0.68
PRPF38A-202ENST00000474048 GPR17Q13304 367 aa10.81□□□□□ -0.68
PRPF38A-202ENST00000474048 MESDQ14696 234 aa10.81□□□□□ -0.68
PRPF38A-202ENST00000474048 CFAP221Q4G0U5 840 aa10.81□□□□□ -0.68
PRPF38A-202ENST00000474048 C2CD6Q53TS8 623 aa10.81□□□□□ -0.68
PRPF38A-202ENST00000474048 EFHC1Q5JVL4 640 aa10.81□□□□□ -0.68
PRPF38A-202ENST00000474048 C9orf50Q5SZB4 431 aa10.81□□□□□ -0.68
PRPF38A-202ENST00000474048 TPGS2Q68CL5 300 aa10.81□□□□□ -0.68
PRPF38A-202ENST00000474048 C11orf63Q6NUN7 778 aa10.81□□□□□ -0.68
PRPF38A-202ENST00000474048 CLEC20AQ6ZU45 233 aa10.81□□□□□ -0.68
PRPF38A-202ENST00000474048 PIGZQ86VD9 579 aa10.81□□□□□ -0.68
PRPF38A-202ENST00000474048 GPR65Q8IYL9 337 aa10.81□□□□□ -0.68
PRPF38A-202ENST00000474048 SLC35F6Q8N357 371 aa10.81□□□□□ -0.68
PRPF38A-202ENST00000474048 UBL4BQ8N7F7 174 aa10.81□□□□□ -0.68
PRPF38A-202ENST00000474048 KLHL23Q8NBE8 558 aa10.81□□□□□ -0.68
PRPF38A-202ENST00000474048 FEZF2Q8TBJ5 459 aa10.81□□□□□ -0.68
PRPF38A-202ENST00000474048 BCL7CQ8WUZ0 217 aaPredicted RBP10.81□□□□□ -0.68
PRPF38A-202ENST00000474048 SLC35F5Q8WV83 523 aa10.81□□□□□ -0.68
PRPF38A-202ENST00000474048 UBE2Q2Q8WVN8 375 aa10.81□□□□□ -0.68
PRPF38A-202ENST00000474048 ARHGEF26Q96DR7 871 aa10.81□□□□□ -0.68
PRPF38A-202ENST00000474048 TMEM209Q96SK2 561 aa10.81□□□□□ -0.68
PRPF38A-202ENST00000474048 NCAPGQ9BPX3 1015 aa10.81□□□□□ -0.68
PRPF38A-202ENST00000474048 LPIN3Q9BQK8 851 aa10.81□□□□□ -0.68
PRPF38A-202ENST00000474048 RTP3Q9BQQ7 232 aa10.81□□□□□ -0.68
PRPF38A-202ENST00000474048 PNPLA8Q9NP80 782 aa10.81□□□□□ -0.68
PRPF38A-202ENST00000474048 LZTS1Q9Y250 596 aa10.81□□□□□ -0.68
PRPF38A-202ENST00000474048 JRKLQ9Y4A0 524 aa10.81□□□□□ -0.68
PRPF38A-202ENST00000474048 NME7Q9Y5B8 376 aa10.81□□□□□ -0.68
PRPF38A-202ENST00000474048 DUSP10Q9Y6W6 482 aa10.81□□□□□ -0.68
PRPF38A-202ENST00000474048 LINC01553A4QN01 128 aa10.8□□□□□ -0.68
PRPF38A-202ENST00000474048 CSPG5O95196 566 aa10.8□□□□□ -0.68
PRPF38A-202ENST00000474048 RTN3O95197 1032 aaPredicted RBP10.8□□□□□ -0.68
PRPF38A-202ENST00000474048 ERBB2P04626 1255 aa10.8□□□□□ -0.68
PRPF38A-202ENST00000474048 CA3P07451 260 aa10.8□□□□□ -0.68
PRPF38A-202ENST00000474048 PSMA2P25787 234 aa10.8□□□□□ -0.68
PRPF38A-202ENST00000474048 CETN2P41208 172 aa10.8□□□□□ -0.68
PRPF38A-202ENST00000474048 SLC1A1P43005 524 aa10.8□□□□□ -0.68
PRPF38A-202ENST00000474048 MAGEA11P43364 429 aa10.8□□□□□ -0.68
PRPF38A-202ENST00000474048 GABRB2P47870 512 aa10.8□□□□□ -0.68
PRPF38A-202ENST00000474048 ALDH1A3P47895 512 aa10.8□□□□□ -0.68
PRPF38A-202ENST00000474048 TKTL1P51854 596 aa10.8□□□□□ -0.68
PRPF38A-202ENST00000474048 CDR1P51861 262 aa10.8□□□□□ -0.68
PRPF38A-202ENST00000474048 HADHBP55084 474 aaKnown RBP10.8□□□□□ -0.68
PRPF38A-202ENST00000474048 GSCP56915 257 aaPredicted RBP10.8□□□□□ -0.68
PRPF38A-202ENST00000474048 RNASE9P60153 205 aaKnown RBP10.8□□□□□ -0.68
PRPF38A-202ENST00000474048 SLC6A3Q01959 620 aa10.8□□□□□ -0.68
PRPF38A-202ENST00000474048 ROR1Q01973 937 aa10.8□□□□□ -0.68
PRPF38A-202ENST00000474048 ADCY1Q08828 1119 aa10.8□□□□□ -0.68
PRPF38A-202ENST00000474048 PLD1Q13393 1074 aa10.8□□□□□ -0.68
PRPF38A-202ENST00000474048 MRPL58Q14197 206 aaKnown RBP10.8□□□□□ -0.68
PRPF38A-202ENST00000474048 PIGHQ14442 188 aaPredicted RBP10.8□□□□□ -0.68
PRPF38A-202ENST00000474048 HADHQ16836 314 aaKnown RBP10.8□□□□□ -0.68
PRPF38A-202ENST00000474048 PKDCCQ504Y2 493 aa10.8□□□□□ -0.68
PRPF38A-202ENST00000474048 KIAA0319Q5VV43 1072 aa10.8□□□□□ -0.68
PRPF38A-202ENST00000474048 PPP2R2DQ66LE6 453 aa10.8□□□□□ -0.68
PRPF38A-202ENST00000474048 PLEKHA7Q6IQ23 1121 aa10.8□□□□□ -0.68
PRPF38A-202ENST00000474048 SLC8B1Q6J4K2 584 aa10.8□□□□□ -0.68
PRPF38A-202ENST00000474048 PMF1Q6P1K2 205 aa10.8□□□□□ -0.68
PRPF38A-202ENST00000474048 NYAP1Q6ZVC0 841 aa10.8□□□□□ -0.68
PRPF38A-202ENST00000474048 FAM183BPQ6ZVS7 135 aa10.8□□□□□ -0.68
PRPF38A-202ENST00000474048 XYLT1Q86Y38 959 aa10.8□□□□□ -0.68
PRPF38A-202ENST00000474048 ELMOD1Q8N336 334 aa10.8□□□□□ -0.68
PRPF38A-202ENST00000474048 ARHGAP18Q8N392 663 aa10.8□□□□□ -0.68
PRPF38A-202ENST00000474048 TPCN2Q8NHX9 752 aa10.8□□□□□ -0.68
PRPF38A-202ENST00000474048 KCTD13Q8WZ19 329 aa10.8□□□□□ -0.68
PRPF38A-202ENST00000474048 TCF25Q9BQ70 676 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms