RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 ADGRG2Q8IZP9 1017 aa13.53□□□□□ -0.24
TRAF4-209ENST00000473421 KCTD17Q8N5Z5 321 aa13.53□□□□□ -0.24
TRAF4-209ENST00000473421 CSGALNACT2Q8N6G5 542 aa13.53□□□□□ -0.24
TRAF4-209ENST00000473421 TXNDC5Q8NBS9 432 aaKnown RBP13.53□□□□□ -0.24
TRAF4-209ENST00000473421 KBTBD7Q8WVZ9 684 aa13.53□□□□□ -0.24
TRAF4-209ENST00000473421 ERLEC1Q96DZ1 483 aa13.53□□□□□ -0.24
TRAF4-209ENST00000473421 EPSTI1Q96J88 318 aa13.53□□□□□ -0.24
TRAF4-209ENST00000473421 ST6GALNAC4Q9H4F1 302 aa13.53□□□□□ -0.24
TRAF4-209ENST00000473421 PDE11AQ9HCR9 933 aa13.53□□□□□ -0.24
TRAF4-209ENST00000473421 ABCB6Q9NP58 842 aa13.53□□□□□ -0.24
TRAF4-209ENST00000473421 CRTAC1Q9NQ79 661 aa13.53□□□□□ -0.24
TRAF4-209ENST00000473421 SMPD4Q9NXE4 827 aa13.53□□□□□ -0.24
TRAF4-209ENST00000473421 HCN2Q9UL51 889 aa13.53□□□□□ -0.24
TRAF4-209ENST00000473421 CIZ1Q9ULV3 898 aaPredicted RBP13.53□□□□□ -0.24
TRAF4-209ENST00000473421 ARHGAP26Q9UNA1 814 aa13.53□□□□□ -0.24
TRAF4-209ENST00000473421 SNX9Q9Y5X1 595 aa13.53□□□□□ -0.24
TRAF4-209ENST00000473421 CELSR3Q9NYQ7 3312 aa13.52□□□□□ -0.24
TRAF4-209ENST00000473421 TBCAO75347 108 aaKnown RBP13.52□□□□□ -0.25
TRAF4-209ENST00000473421 KLF8O95600 359 aaPredicted RBP13.52□□□□□ -0.25
TRAF4-209ENST00000473421 CAPNS1P04632 268 aa13.52□□□□□ -0.25
TRAF4-209ENST00000473421 ENGP17813 658 aa13.52□□□□□ -0.25
TRAF4-209ENST00000473421 BDNFP23560 247 aa13.52□□□□□ -0.25
TRAF4-209ENST00000473421 ITPKAP23677 461 aa13.52□□□□□ -0.25
TRAF4-209ENST00000473421 TIE1P35590 1138 aa13.52□□□□□ -0.25
TRAF4-209ENST00000473421 UBA7P41226 1012 aa13.52□□□□□ -0.25
TRAF4-209ENST00000473421 KIR2DL1P43626 348 aaPredicted RBP13.52□□□□□ -0.25
TRAF4-209ENST00000473421 MAP7D1Q3KQU3 841 aa13.52□□□□□ -0.25
TRAF4-209ENST00000473421 CFAP221Q4G0U5 840 aa13.52□□□□□ -0.25
TRAF4-209ENST00000473421 SLFN12LQ6IEE8 588 aa13.52□□□□□ -0.25
TRAF4-209ENST00000473421 RHBDF2Q6PJF5 856 aa13.52□□□□□ -0.25
TRAF4-209ENST00000473421 LIMS2Q7Z4I7 341 aa13.52□□□□□ -0.25
TRAF4-209ENST00000473421 PIP4P1Q86T03 277 aa13.52□□□□□ -0.25
TRAF4-209ENST00000473421 BRSK2Q8IWQ3 736 aa13.52□□□□□ -0.25
TRAF4-209ENST00000473421 OR5B17Q8NGF7 314 aa13.52□□□□□ -0.25
TRAF4-209ENST00000473421 ZCCHC14Q8WYQ9 949 aaKnown RBP13.52□□□□□ -0.25
TRAF4-209ENST00000473421 CBWD1Q9BRT8 395 aa13.52□□□□□ -0.25
TRAF4-209ENST00000473421 GDAP2Q9NXN4 497 aa13.52□□□□□ -0.25
TRAF4-209ENST00000473421 MYMKA6NI61 221 aa13.51□□□□□ -0.25
TRAF4-209ENST00000473421 TRIM24O15164 1050 aa13.51□□□□□ -0.25
TRAF4-209ENST00000473421 HUS1O60921 280 aa13.51□□□□□ -0.25
TRAF4-209ENST00000473421 IL18RAPO95256 599 aa13.51□□□□□ -0.25
TRAF4-209ENST00000473421 PDGFRBP09619 1106 aa13.51□□□□□ -0.25
TRAF4-209ENST00000473421 TCF3P15923 654 aa13.51□□□□□ -0.25
TRAF4-209ENST00000473421 KCNB1Q14721 858 aa13.51□□□□□ -0.25
TRAF4-209ENST00000473421 DHCR24Q15392 516 aa13.51□□□□□ -0.25
TRAF4-209ENST00000473421 LRSAM1Q6UWE0 723 aa13.51□□□□□ -0.25
TRAF4-209ENST00000473421 SPATA2LQ8IUW3 424 aaPredicted RBP13.51□□□□□ -0.25
TRAF4-209ENST00000473421 ADGRF2Q8IZF7 708 aa13.51□□□□□ -0.25
TRAF4-209ENST00000473421 PHTF2Q8N3S3 785 aa13.51□□□□□ -0.25
TRAF4-209ENST00000473421 GLIS3Q8NEA6 775 aa13.51□□□□□ -0.25
TRAF4-209ENST00000473421 LARP4BQ92615 738 aaKnown RBP13.51□□□□□ -0.25
TRAF4-209ENST00000473421 WBP2Q969T9 261 aa13.51□□□□□ -0.25
TRAF4-209ENST00000473421 MYLPFQ96A32 169 aa13.51□□□□□ -0.25
TRAF4-209ENST00000473421 DNAJC19Q96DA6 116 aa13.51□□□□□ -0.25
TRAF4-209ENST00000473421 CALML4Q96GE6 196 aa13.51□□□□□ -0.25
TRAF4-209ENST00000473421 ZNF560Q96MR9 790 aa13.51□□□□□ -0.25
TRAF4-209ENST00000473421 MTMR12Q9C0I1 747 aa13.51□□□□□ -0.25
TRAF4-209ENST00000473421 PCIF1Q9H4Z3 704 aa13.51□□□□□ -0.25
TRAF4-209ENST00000473421 UXTQ9UBK9 157 aaPredicted RBP13.51□□□□□ -0.25
TRAF4-209ENST00000473421 LAMA5O15230 3695 aa13.5□□□□□ -0.25
TRAF4-209ENST00000473421 ZNF840PA6NDX5 716 aa13.5□□□□□ -0.25
TRAF4-209ENST00000473421 NFATC1O95644 943 aa13.5□□□□□ -0.25
TRAF4-209ENST00000473421 KRT19P08727 400 aa13.5□□□□□ -0.25
TRAF4-209ENST00000473421 GJB2P29033 226 aa13.5□□□□□ -0.25
TRAF4-209ENST00000473421 DDIT3P35638 169 aa13.5□□□□□ -0.25
TRAF4-209ENST00000473421 PNPLA4P41247 253 aa13.5□□□□□ -0.25
TRAF4-209ENST00000473421 MYL7Q01449 175 aa13.5□□□□□ -0.25
TRAF4-209ENST00000473421 KDSRQ06136 332 aa13.5□□□□□ -0.25
TRAF4-209ENST00000473421 NR1H3Q13133 447 aa13.5□□□□□ -0.25
TRAF4-209ENST00000473421 SEMA3BQ13214 749 aa13.5□□□□□ -0.25
TRAF4-209ENST00000473421 MIB1Q86YT6 1006 aa13.5□□□□□ -0.25
TRAF4-209ENST00000473421 CHCHD4Q8N4Q1 142 aa13.5□□□□□ -0.25
TRAF4-209ENST00000473421 HMGB4Q8WW32 186 aa13.5□□□□□ -0.25
TRAF4-209ENST00000473421 AK8Q96MA6 479 aa13.5□□□□□ -0.25
TRAF4-209ENST00000473421 CAMK1GQ96NX5 476 aa13.5□□□□□ -0.25
TRAF4-209ENST00000473421 SYT15Q9BQS2 421 aa13.5□□□□□ -0.25
TRAF4-209ENST00000473421 RBAKQ9NYW8 714 aaPredicted RBP13.5□□□□□ -0.25
TRAF4-209ENST00000473421 EVLQ9UI08 416 aaPredicted RBP13.5□□□□□ -0.25
TRAF4-209ENST00000473421 PILRBQ9UKJ0 227 aa13.5□□□□□ -0.25
TRAF4-209ENST00000473421 LHX6Q9UPM6 363 aa13.5□□□□□ -0.25
TRAF4-209ENST00000473421 CPQQ9Y646 472 aa13.5□□□□□ -0.25
TRAF4-209ENST00000473421 ITPR1Q14643 2758 aa13.5□□□□□ -0.25
TRAF4-209ENST00000473421 CEP192Q8TEP8 1941 aa13.5□□□□□ -0.25
TRAF4-209ENST00000473421 PCDH15Q96QU1 1955 aa13.49□□□□□ -0.25
TRAF4-209ENST00000473421 TNFRSF10BO14763 440 aa13.49□□□□□ -0.25
TRAF4-209ENST00000473421 KAT7O95251 611 aa13.49□□□□□ -0.25
TRAF4-209ENST00000473421 OLFM2O95897 454 aa13.49□□□□□ -0.25
TRAF4-209ENST00000473421 SCP2P22307 547 aa13.49□□□□□ -0.25
TRAF4-209ENST00000473421 MAGEA11P43364 429 aa13.49□□□□□ -0.25
TRAF4-209ENST00000473421 SIM1P81133 766 aaPredicted RBP13.49□□□□□ -0.25
TRAF4-209ENST00000473421 POU5F1Q01860 360 aaKnown RBP13.49□□□□□ -0.25
TRAF4-209ENST00000473421 LPCAT2Q7L5N7 544 aa13.49□□□□□ -0.25
TRAF4-209ENST00000473421 SYT12Q8IV01 421 aa13.49□□□□□ -0.25
TRAF4-209ENST00000473421 TMEM86AQ8N2M4 240 aa13.49□□□□□ -0.25
TRAF4-209ENST00000473421 TOP6BLQ8N6T0 577 aa13.49□□□□□ -0.25
TRAF4-209ENST00000473421 LRRC52Q8N7C0 313 aa13.49□□□□□ -0.25
TRAF4-209ENST00000473421 NOC3LQ8WTT2 800 aaKnown RBP13.49□□□□□ -0.25
TRAF4-209ENST00000473421 PCED1BQ96HM7 432 aa13.49□□□□□ -0.25
TRAF4-209ENST00000473421 TRIM9Q9C026 710 aa13.49□□□□□ -0.25
TRAF4-209ENST00000473421 CD93Q9NPY3 652 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms