RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 RAP1GAPP47736 663 aa19.24■□□□□ 0.67
SNX4-204ENST00000473417 GPR15P49685 360 aa19.24■□□□□ 0.67
SNX4-204ENST00000473417 CDH8P55286 799 aa19.24■□□□□ 0.67
SNX4-204ENST00000473417 TPD52L1Q16890 204 aaPredicted RBP19.24■□□□□ 0.67
SNX4-204ENST00000473417 CCDC142Q17RM4 750 aa19.24■□□□□ 0.67
SNX4-204ENST00000473417 CFAP221Q4G0U5 840 aa19.24■□□□□ 0.67
SNX4-204ENST00000473417 ARHGAP29Q52LW3 1261 aa19.24■□□□□ 0.67
SNX4-204ENST00000473417 GPIHBP1Q8IV16 184 aa19.24■□□□□ 0.67
SNX4-204ENST00000473417 STKLD1Q8NE28 680 aa19.24■□□□□ 0.67
SNX4-204ENST00000473417 OR6B3Q8NGW1 331 aa19.24■□□□□ 0.67
SNX4-204ENST00000473417 CSGALNACT1Q8TDX6 532 aa19.24■□□□□ 0.67
SNX4-204ENST00000473417 FAM3CQ92520 227 aa19.24■□□□□ 0.67
SNX4-204ENST00000473417 TAF4BQ92750 862 aa19.24■□□□□ 0.67
SNX4-204ENST00000473417 SEMA4DQ92854 862 aa19.24■□□□□ 0.67
SNX4-204ENST00000473417 IMPG2Q9BZV3 1241 aa19.24■□□□□ 0.67
SNX4-204ENST00000473417 SNX25Q9H3E2 840 aa19.24■□□□□ 0.67
SNX4-204ENST00000473417 SMYD3Q9H7B4 428 aa19.24■□□□□ 0.67
SNX4-204ENST00000473417 ZMYM5Q9UJ78 669 aa19.24■□□□□ 0.67
SNX4-204ENST00000473417 GTF3C4Q9UKN8 822 aa19.24■□□□□ 0.67
SNX4-204ENST00000473417 KIAA1549LQ6ZVL6 1849 aa19.23■□□□□ 0.67
SNX4-204ENST00000473417 MYO16Q9Y6X6 1858 aa19.23■□□□□ 0.67
SNX4-204ENST00000473417 DPYSL4O14531 572 aa19.23■□□□□ 0.67
SNX4-204ENST00000473417 TACC1O75410 805 aa19.23■□□□□ 0.67
SNX4-204ENST00000473417 LMNAP02545 664 aaKnown RBP19.23■□□□□ 0.67
SNX4-204ENST00000473417 F11P03951 625 aa19.23■□□□□ 0.67
SNX4-204ENST00000473417 CSH1P0DML2 217 aa19.23■□□□□ 0.67
SNX4-204ENST00000473417 CSH2P0DML3 217 aa19.23■□□□□ 0.67
SNX4-204ENST00000473417 CCDC192P0DO97 292 aa19.23■□□□□ 0.67
SNX4-204ENST00000473417 CYP2F1P24903 491 aa19.23■□□□□ 0.67
SNX4-204ENST00000473417 ERCC5P28715 1186 aaPredicted RBP19.23■□□□□ 0.67
SNX4-204ENST00000473417 CCDC150Q8NCX0 1101 aa19.23■□□□□ 0.67
SNX4-204ENST00000473417 FBXL13Q8NEE6 735 aa19.23■□□□□ 0.67
SNX4-204ENST00000473417 FUBP3Q96I24 572 aaKnown RBP eCLIP19.23■□□□□ 0.67
SNX4-204ENST00000473417 IER2Q9BTL4 223 aa19.23■□□□□ 0.67
SNX4-204ENST00000473417 SLC46A2Q9BY10 475 aa19.23■□□□□ 0.67
SNX4-204ENST00000473417 CHRDQ9H2X0 955 aa19.23■□□□□ 0.67
SNX4-204ENST00000473417 APOBEC3GQ9HC16 384 aaKnown RBP19.23■□□□□ 0.67
SNX4-204ENST00000473417 PRMT8Q9NR22 394 aaPredicted RBP19.23■□□□□ 0.67
SNX4-204ENST00000473417 RAB20Q9NX57 234 aa19.23■□□□□ 0.67
SNX4-204ENST00000473417 NME7Q9Y5B8 376 aa19.23■□□□□ 0.67
SNX4-204ENST00000473417 DCHS1Q96JQ0 3298 aa19.22■□□□□ 0.67
SNX4-204ENST00000473417 SLC38A8A6NNN8 435 aa19.22■□□□□ 0.67
SNX4-204ENST00000473417 ATP2C2O75185 946 aa19.22■□□□□ 0.67
SNX4-204ENST00000473417 NOL4O94818 638 aa19.22■□□□□ 0.67
SNX4-204ENST00000473417 FAM163BP0C2L3 166 aa19.22■□□□□ 0.67
SNX4-204ENST00000473417 P4HA1P13674 534 aa19.22■□□□□ 0.67
SNX4-204ENST00000473417 DDX6P26196 483 aaKnown RBP eCLIP19.22■□□□□ 0.67
SNX4-204ENST00000473417 PSMC1P62191 440 aaKnown RBP19.22■□□□□ 0.67
SNX4-204ENST00000473417 RPL10AP62906 217 aaKnown RBP19.22■□□□□ 0.67
SNX4-204ENST00000473417 NOP14P78316 857 aaKnown RBP19.22■□□□□ 0.67
SNX4-204ENST00000473417 DDR2Q16832 855 aa19.22■□□□□ 0.67
SNX4-204ENST00000473417 FAM171BQ6P995 826 aa19.22■□□□□ 0.67
SNX4-204ENST00000473417 C1orf228Q6PIY5 440 aa19.22■□□□□ 0.67
SNX4-204ENST00000473417 TRIM59Q8IWR1 403 aa19.22■□□□□ 0.67
SNX4-204ENST00000473417 CMTM8Q8IZV2 173 aa19.22■□□□□ 0.67
SNX4-204ENST00000473417 BPIFB1Q8TDL5 484 aa19.22■□□□□ 0.67
SNX4-204ENST00000473417 TRMT2BQ96GJ1 504 aaKnown RBP19.22■□□□□ 0.67
SNX4-204ENST00000473417 ZFYVE19Q96K21 471 aa19.22■□□□□ 0.67
SNX4-204ENST00000473417 SYT15Q9BQS2 421 aa19.22■□□□□ 0.67
SNX4-204ENST00000473417 SDCBP2Q9H190 292 aa19.22■□□□□ 0.67
SNX4-204ENST00000473417 C8orf33Q9H7E9 229 aaPredicted RBP19.22■□□□□ 0.67
SNX4-204ENST00000473417 MYBPHLA2RUH7 354 aa19.21■□□□□ 0.67
SNX4-204ENST00000473417 SOBPA7XYQ1 873 aa19.21■□□□□ 0.67
SNX4-204ENST00000473417 A8MXQ7 604 aa19.21■□□□□ 0.67
SNX4-204ENST00000473417 TADA3O75528 432 aa19.21■□□□□ 0.67
SNX4-204ENST00000473417 ASPAP45381 313 aa19.21■□□□□ 0.67
SNX4-204ENST00000473417 FMO5P49326 533 aa19.21■□□□□ 0.67
SNX4-204ENST00000473417 MARSP56192 900 aaKnown RBP19.21■□□□□ 0.67
SNX4-204ENST00000473417 CSTF1Q05048 431 aaKnown RBP19.21■□□□□ 0.67
SNX4-204ENST00000473417 MTAPQ13126 283 aa19.21■□□□□ 0.67
SNX4-204ENST00000473417 SDHAF4Q5VUM1 108 aa19.21■□□□□ 0.67
SNX4-204ENST00000473417 SPATA2LQ8IUW3 424 aaPredicted RBP19.21■□□□□ 0.67
SNX4-204ENST00000473417 CELF5Q8N6W0 485 aaKnown RBP19.21■□□□□ 0.67
SNX4-204ENST00000473417 NELL1Q92832 810 aa19.21■□□□□ 0.67
SNX4-204ENST00000473417 CNOT6LQ96LI5 555 aaKnown RBP19.21■□□□□ 0.67
SNX4-204ENST00000473417 MYRFLQ96LU7 910 aa19.21■□□□□ 0.67
SNX4-204ENST00000473417 SMG9Q9H0W8 520 aaKnown RBP19.21■□□□□ 0.67
SNX4-204ENST00000473417 ANO10Q9NW15 660 aa19.21■□□□□ 0.67
SNX4-204ENST00000473417 UXTQ9UBK9 157 aaPredicted RBP19.21■□□□□ 0.67
SNX4-204ENST00000473417 CDH9Q9ULB4 789 aa19.21■□□□□ 0.67
SNX4-204ENST00000473417 MAGED2Q9UNF1 606 aaPredicted RBP19.21■□□□□ 0.67
SNX4-204ENST00000473417 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.21■□□□□ 0.67
SNX4-204ENST00000473417 MYH10P35580 1976 aa19.21■□□□□ 0.67
SNX4-204ENST00000473417 CHRNB1P11230 501 aa19.2■□□□□ 0.66
SNX4-204ENST00000473417 PTMSP20962 102 aa19.2■□□□□ 0.66
SNX4-204ENST00000473417 CTHP32929 405 aa19.2■□□□□ 0.66
SNX4-204ENST00000473417 MAGEA11P43364 429 aa19.2■□□□□ 0.66
SNX4-204ENST00000473417 SOX9P48436 509 aa19.2■□□□□ 0.66
SNX4-204ENST00000473417 KPNA1P52294 538 aaPredicted RBP19.2■□□□□ 0.66
SNX4-204ENST00000473417 PLCB2Q00722 1185 aa19.2■□□□□ 0.66
SNX4-204ENST00000473417 KCNH2Q12809 1159 aa19.2■□□□□ 0.66
SNX4-204ENST00000473417 STX1AQ16623 288 aa19.2■□□□□ 0.66
SNX4-204ENST00000473417 CT47A1Q5JQC4 288 aaPredicted RBP19.2■□□□□ 0.66
SNX4-204ENST00000473417 WDR44Q5JSH3 913 aa19.2■□□□□ 0.66
SNX4-204ENST00000473417 MAMSTRQ6ZN01 415 aa19.2■□□□□ 0.66
SNX4-204ENST00000473417 C11orf57Q6ZUT1 292 aaPredicted RBP19.2■□□□□ 0.66
SNX4-204ENST00000473417 IRF2BP1Q8IU81 584 aa19.2■□□□□ 0.66
SNX4-204ENST00000473417 MAB21L3Q8N8X9 362 aa19.2■□□□□ 0.66
SNX4-204ENST00000473417 ZBTB44Q8NCP5 570 aa19.2■□□□□ 0.66
SNX4-204ENST00000473417 MRPS31Q92665 395 aaKnown RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms