RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 OSCP1Q8WVF1 389 aa7.43□□□□□ -1.22
CKS1B-205ENST00000473344 POMGNT1Q8WZA1 660 aa7.43□□□□□ -1.22
CKS1B-205ENST00000473344 CCSER1Q9C0I3 900 aa7.43□□□□□ -1.22
CKS1B-205ENST00000473344 FBRSL1Q9HCM7 1045 aaKnown RBP7.43□□□□□ -1.22
CKS1B-205ENST00000473344 TMEM9BQ9NQ34 198 aa7.43□□□□□ -1.22
CKS1B-205ENST00000473344 POLR3BQ9NW08 1133 aaPredicted RBP7.43□□□□□ -1.22
CKS1B-205ENST00000473344 DDX43Q9NXZ2 648 aaKnown RBP7.43□□□□□ -1.22
CKS1B-205ENST00000473344 RALYQ9UKM9 306 aaKnown RBP7.43□□□□□ -1.22
CKS1B-205ENST00000473344 WNT6Q9Y6F9 365 aa7.43□□□□□ -1.22
CKS1B-205ENST00000473344 LNP1A1A4G5 178 aa7.42□□□□□ -1.22
CKS1B-205ENST00000473344 BCLAF3A2AJT9 711 aaKnown RBP7.42□□□□□ -1.22
CKS1B-205ENST00000473344 C1QTNF9BB2RNN3 333 aa7.42□□□□□ -1.22
CKS1B-205ENST00000473344 ANKRD63C9JTQ0 380 aa7.42□□□□□ -1.22
CKS1B-205ENST00000473344 ALDH1A2O94788 518 aa7.42□□□□□ -1.22
CKS1B-205ENST00000473344 NFATC1O95644 943 aa7.42□□□□□ -1.22
CKS1B-205ENST00000473344 ITGB3P05106 788 aa7.42□□□□□ -1.22
CKS1B-205ENST00000473344 KRT19P08727 400 aa7.42□□□□□ -1.22
CKS1B-205ENST00000473344 C1QTNF9P0C862 333 aa7.42□□□□□ -1.22
CKS1B-205ENST00000473344 CEACAM1P13688 526 aa7.42□□□□□ -1.22
CKS1B-205ENST00000473344 ACAT1P24752 427 aaKnown RBP7.42□□□□□ -1.22
CKS1B-205ENST00000473344 CYP2F1P24903 491 aa7.42□□□□□ -1.22
CKS1B-205ENST00000473344 GPR15P49685 360 aa7.42□□□□□ -1.22
CKS1B-205ENST00000473344 PDE6CP51160 858 aa7.42□□□□□ -1.22
CKS1B-205ENST00000473344 ZNF131P52739 623 aa7.42□□□□□ -1.22
CKS1B-205ENST00000473344 SEC13P55735 322 aa7.42□□□□□ -1.22
CKS1B-205ENST00000473344 TFAMQ00059 246 aaKnown RBP7.42□□□□□ -1.22
CKS1B-205ENST00000473344 POU5F1Q01860 360 aaKnown RBP7.42□□□□□ -1.22
CKS1B-205ENST00000473344 MCM6Q14566 821 aa7.42□□□□□ -1.22
CKS1B-205ENST00000473344 POSTNQ15063 836 aa7.42□□□□□ -1.22
CKS1B-205ENST00000473344 ZC2HC1CQ53FD0 456 aaPredicted RBP7.42□□□□□ -1.22
CKS1B-205ENST00000473344 C2orf27AQ580R0 203 aa7.42□□□□□ -1.22
CKS1B-205ENST00000473344 SDHAF4Q5VUM1 108 aa7.42□□□□□ -1.22
CKS1B-205ENST00000473344 ANO7Q6IWH7 933 aa7.42□□□□□ -1.22
CKS1B-205ENST00000473344 SLC39A4Q6P5W5 647 aa7.42□□□□□ -1.22
CKS1B-205ENST00000473344 TREML4Q6UXN2 200 aa7.42□□□□□ -1.22
CKS1B-205ENST00000473344 CYP2U1Q7Z449 544 aa7.42□□□□□ -1.22
CKS1B-205ENST00000473344 METTL3Q86U44 580 aaKnown RBP7.42□□□□□ -1.22
CKS1B-205ENST00000473344 NT5DC4Q86YG4 428 aa7.42□□□□□ -1.22
CKS1B-205ENST00000473344 SPATA2LQ8IUW3 424 aaPredicted RBP7.42□□□□□ -1.22
CKS1B-205ENST00000473344 SCN4BQ8IWT1 228 aa7.42□□□□□ -1.22
CKS1B-205ENST00000473344 EFCAB13Q8IY85 973 aa7.42□□□□□ -1.22
CKS1B-205ENST00000473344 STKLD1Q8NE28 680 aa7.42□□□□□ -1.22
CKS1B-205ENST00000473344 CACTINQ8WUQ7 758 aaKnown RBP7.42□□□□□ -1.22
CKS1B-205ENST00000473344 LEO1Q8WVC0 666 aaPredicted RBP7.42□□□□□ -1.22
CKS1B-205ENST00000473344 SNX21Q969T3 373 aa7.42□□□□□ -1.22
CKS1B-205ENST00000473344 TRMT2BQ96GJ1 504 aaKnown RBP7.42□□□□□ -1.22
CKS1B-205ENST00000473344 CYP2S1Q96SQ9 504 aa7.42□□□□□ -1.22
CKS1B-205ENST00000473344 ACBD6Q9BR61 282 aa7.42□□□□□ -1.22
CKS1B-205ENST00000473344 FAM213AQ9BRX8 229 aa7.42□□□□□ -1.22
CKS1B-205ENST00000473344 TPSD1Q9BZJ3 242 aa7.42□□□□□ -1.22
CKS1B-205ENST00000473344 TMEM206Q9H813 350 aa7.42□□□□□ -1.22
CKS1B-205ENST00000473344 ABCB6Q9NP58 842 aa7.42□□□□□ -1.22
CKS1B-205ENST00000473344 TMLHEQ9NVH6 421 aa7.42□□□□□ -1.22
CKS1B-205ENST00000473344 GTF3C4Q9UKN8 822 aa7.42□□□□□ -1.22
CKS1B-205ENST00000473344 ZMIZ1Q9ULJ6 1067 aa7.42□□□□□ -1.22
CKS1B-205ENST00000473344 AGAP1Q9UPQ3 857 aa7.42□□□□□ -1.22
CKS1B-205ENST00000473344 EXOC7Q9UPT5 735 aa7.42□□□□□ -1.22
CKS1B-205ENST00000473344 INVSQ9Y283 1065 aa7.42□□□□□ -1.22
CKS1B-205ENST00000473344 CACNA1BQ00975 2339 aa7.42□□□□□ -1.22
CKS1B-205ENST00000473344 PDCD11Q14690 1871 aaKnown RBP7.42□□□□□ -1.22
CKS1B-205ENST00000473344 CHD8Q9HCK8 2581 aa7.42□□□□□ -1.22
CKS1B-205ENST00000473344 FREM2Q5SZK8 3169 aa7.41□□□□□ -1.22
CKS1B-205ENST00000473344 NUP210Q8TEM1 1887 aaPredicted RBP7.41□□□□□ -1.22
CKS1B-205ENST00000473344 TRIP11Q15643 1979 aa7.41□□□□□ -1.22
CKS1B-205ENST00000473344 CITO14578 2027 aa7.41□□□□□ -1.22
CKS1B-205ENST00000473344 TISP43B9A030 160 aa7.41□□□□□ -1.22
CKS1B-205ENST00000473344 GIPC1O14908 333 aa7.41□□□□□ -1.22
CKS1B-205ENST00000473344 NOL4O94818 638 aa7.41□□□□□ -1.22
CKS1B-205ENST00000473344 LDHAP00338 332 aaKnown RBP7.41□□□□□ -1.22
CKS1B-205ENST00000473344 AVPP01185 164 aa7.41□□□□□ -1.22
CKS1B-205ENST00000473344 HDCP19113 662 aa7.41□□□□□ -1.22
CKS1B-205ENST00000473344 PLCG1P19174 1290 aa7.41□□□□□ -1.22
CKS1B-205ENST00000473344 PCSK1P29120 753 aa7.41□□□□□ -1.22
CKS1B-205ENST00000473344 POLR2BP30876 1174 aaKnown RBP7.41□□□□□ -1.22
CKS1B-205ENST00000473344 LONP1P36776 959 aaKnown RBP7.41□□□□□ -1.22
CKS1B-205ENST00000473344 LHX1P48742 406 aa7.41□□□□□ -1.22
CKS1B-205ENST00000473344 DHPSP49366 369 aaPredicted RBP7.41□□□□□ -1.22
CKS1B-205ENST00000473344 SLC20A2Q08357 652 aa7.41□□□□□ -1.22
CKS1B-205ENST00000473344 LMAN2Q12907 356 aa7.41□□□□□ -1.22
CKS1B-205ENST00000473344 ZNF77Q15935 545 aa7.41□□□□□ -1.22
CKS1B-205ENST00000473344 EML3Q32P44 896 aa7.41□□□□□ -1.22
CKS1B-205ENST00000473344 UAP1L1Q3KQV9 507 aa7.41□□□□□ -1.22
CKS1B-205ENST00000473344 CFAP221Q4G0U5 840 aa7.41□□□□□ -1.22
CKS1B-205ENST00000473344 INTS6LQ5JSJ4 861 aaKnown RBP7.41□□□□□ -1.22
CKS1B-205ENST00000473344 PMS2CLQ68D20 193 aa7.41□□□□□ -1.22
CKS1B-205ENST00000473344 LMBRD2Q68DH5 695 aaPredicted RBP7.41□□□□□ -1.22
CKS1B-205ENST00000473344 NAIF1Q69YI7 327 aaPredicted RBP7.41□□□□□ -1.22
CKS1B-205ENST00000473344 TMEM86AQ8N2M4 240 aa7.41□□□□□ -1.22
CKS1B-205ENST00000473344 CSGALNACT2Q8N6G5 542 aa7.41□□□□□ -1.22
CKS1B-205ENST00000473344 ARL14EPQ8N8R7 260 aaPredicted RBP7.41□□□□□ -1.22
CKS1B-205ENST00000473344 RIN3Q8TB24 985 aa7.41□□□□□ -1.22
CKS1B-205ENST00000473344 SH3RF2Q8TEC5 729 aa7.41□□□□□ -1.22
CKS1B-205ENST00000473344 NOC3LQ8WTT2 800 aaKnown RBP7.41□□□□□ -1.22
CKS1B-205ENST00000473344 LARP4BQ92615 738 aaKnown RBP7.41□□□□□ -1.22
CKS1B-205ENST00000473344 RAD54LQ92698 747 aa7.41□□□□□ -1.22
CKS1B-205ENST00000473344 HVCN1Q96D96 273 aa7.41□□□□□ -1.22
CKS1B-205ENST00000473344 SPACA7Q96KW9 195 aa7.41□□□□□ -1.22
CKS1B-205ENST00000473344 MYRFLQ96LU7 910 aa7.41□□□□□ -1.22
CKS1B-205ENST00000473344 NUSAP1Q9BXS6 441 aaKnown RBP7.41□□□□□ -1.22
CKS1B-205ENST00000473344 SLC32A1Q9H598 525 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms