RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 STX10O60499 249 aa23.97■■□□□ 1.43
PTP4A1-203ENST00000473334 NBL1P41271 181 aa23.97■■□□□ 1.43
PTP4A1-203ENST00000473334 HELZP42694 1942 aaKnown RBP23.97■■□□□ 1.43
PTP4A1-203ENST00000473334 RPS9P46781 194 aaKnown RBP23.97■■□□□ 1.43
PTP4A1-203ENST00000473334 KPNA1P52294 538 aaPredicted RBP23.97■■□□□ 1.43
PTP4A1-203ENST00000473334 NDST1P52848 882 aa23.97■■□□□ 1.43
PTP4A1-203ENST00000473334 PMS1P54277 932 aaKnown RBP23.97■■□□□ 1.43
PTP4A1-203ENST00000473334 LRRC63Q05C16 580 aa23.97■■□□□ 1.43
PTP4A1-203ENST00000473334 STIM1Q13586 685 aa23.97■■□□□ 1.43
PTP4A1-203ENST00000473334 ANKRD40Q6AI12 368 aa23.97■■□□□ 1.43
PTP4A1-203ENST00000473334 C1orf228Q6PIY5 440 aa23.97■■□□□ 1.43
PTP4A1-203ENST00000473334 ACOT1Q86TX2 421 aa23.97■■□□□ 1.43
PTP4A1-203ENST00000473334 CCDC150Q8NCX0 1101 aa23.97■■□□□ 1.43
PTP4A1-203ENST00000473334 MED10Q9BTT4 135 aa23.97■■□□□ 1.43
PTP4A1-203ENST00000473334 APOBEC3GQ9HC16 384 aaKnown RBP23.97■■□□□ 1.43
PTP4A1-203ENST00000473334 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.97■■□□□ 1.43
PTP4A1-203ENST00000473334 CHMP5Q9NZZ3 219 aa23.97■■□□□ 1.43
PTP4A1-203ENST00000473334 MAN1B1Q9UKM7 699 aa23.97■■□□□ 1.43
PTP4A1-203ENST00000473334 PSMA7O14818 248 aa23.96■■□□□ 1.43
PTP4A1-203ENST00000473334 CKMP06732 381 aa23.96■■□□□ 1.43
PTP4A1-203ENST00000473334 USP17L7P0C7H9 530 aa23.96■■□□□ 1.43
PTP4A1-203ENST00000473334 CCNE1P24864 410 aa23.96■■□□□ 1.43
PTP4A1-203ENST00000473334 PPP1R2P41236 205 aa23.96■■□□□ 1.43
PTP4A1-203ENST00000473334 MXI1P50539 228 aa23.96■■□□□ 1.43
PTP4A1-203ENST00000473334 ISM2Q6H9L7 571 aa23.96■■□□□ 1.43
PTP4A1-203ENST00000473334 ZNF687Q8N1G0 1237 aa23.96■■□□□ 1.43
PTP4A1-203ENST00000473334 CRYBG2Q8N1P7 616 aa23.96■■□□□ 1.43
PTP4A1-203ENST00000473334 NIF3L1Q9GZT8 377 aa23.96■■□□□ 1.43
PTP4A1-203ENST00000473334 CYP3A43Q9HB55 503 aa23.96■■□□□ 1.43
PTP4A1-203ENST00000473334 GTSE1Q9NYZ3 720 aa23.96■■□□□ 1.43
PTP4A1-203ENST00000473334 TRPM5Q9NZQ8 1165 aa23.96■■□□□ 1.43
PTP4A1-203ENST00000473334 HMGXB4Q9UGU5 601 aa23.96■■□□□ 1.43
PTP4A1-203ENST00000473334 F5P12259 2224 aa23.96■■□□□ 1.43
PTP4A1-203ENST00000473334 C2orf78A6NCI8 922 aa23.95■■□□□ 1.42
PTP4A1-203ENST00000473334 TRIM49BA6NDI0 452 aa23.95■■□□□ 1.42
PTP4A1-203ENST00000473334 PROB1E7EW31 1015 aa23.95■■□□□ 1.42
PTP4A1-203ENST00000473334 TRIM21P19474 475 aaKnown RBP23.95■■□□□ 1.42
PTP4A1-203ENST00000473334 PPP3CCP48454 512 aa23.95■■□□□ 1.42
PTP4A1-203ENST00000473334 PDE6CP51160 858 aa23.95■■□□□ 1.42
PTP4A1-203ENST00000473334 INCA1Q0VD86 236 aa23.95■■□□□ 1.42
PTP4A1-203ENST00000473334 FZD5Q13467 585 aa23.95■■□□□ 1.42
PTP4A1-203ENST00000473334 PAQR9Q6ZVX9 377 aa23.95■■□□□ 1.42
PTP4A1-203ENST00000473334 SMARCD1Q96GM5 515 aa23.95■■□□□ 1.42
PTP4A1-203ENST00000473334 SLC22A12Q96S37 553 aa23.95■■□□□ 1.42
PTP4A1-203ENST00000473334 DMAP1Q9NPF5 467 aaPredicted RBP23.95■■□□□ 1.42
PTP4A1-203ENST00000473334 GKN1Q9NS71 199 aa23.95■■□□□ 1.42
PTP4A1-203ENST00000473334 SPATA6Q9NWH7 488 aaPredicted RBP23.95■■□□□ 1.42
PTP4A1-203ENST00000473334 GCNT4Q9P109 453 aa23.95■■□□□ 1.42
PTP4A1-203ENST00000473334 SPECC1L-ADORA2AF8WAN1 911 aa23.94■■□□□ 1.42
PTP4A1-203ENST00000473334 PFKLP17858 780 aa23.94■■□□□ 1.42
PTP4A1-203ENST00000473334 SOX9P48436 509 aa23.94■■□□□ 1.42
PTP4A1-203ENST00000473334 TNK2Q07912 1038 aa23.94■■□□□ 1.42
PTP4A1-203ENST00000473334 ORC1Q13415 861 aa23.94■■□□□ 1.42
PTP4A1-203ENST00000473334 TCERG1LQ5VWI1 586 aa23.94■■□□□ 1.42
PTP4A1-203ENST00000473334 RALGPS2Q86X27 583 aaPredicted RBP23.94■■□□□ 1.42
PTP4A1-203ENST00000473334 FUKQ8N0W3 1084 aa23.94■■□□□ 1.42
PTP4A1-203ENST00000473334 NUP93Q8N1F7 819 aa23.94■■□□□ 1.42
PTP4A1-203ENST00000473334 ARL14EPQ8N8R7 260 aaPredicted RBP23.94■■□□□ 1.42
PTP4A1-203ENST00000473334 FBXL13Q8NEE6 735 aa23.94■■□□□ 1.42
PTP4A1-203ENST00000473334 TTC8Q8TAM2 541 aa23.94■■□□□ 1.42
PTP4A1-203ENST00000473334 RIN3Q8TB24 985 aa23.94■■□□□ 1.42
PTP4A1-203ENST00000473334 DHTKD1Q96HY7 919 aaPredicted RBP23.94■■□□□ 1.42
PTP4A1-203ENST00000473334 CYP2S1Q96SQ9 504 aa23.94■■□□□ 1.42
PTP4A1-203ENST00000473334 FAM83CQ9BQN1 747 aa23.94■■□□□ 1.42
PTP4A1-203ENST00000473334 MYH10P35580 1976 aa23.93■■□□□ 1.42
PTP4A1-203ENST00000473334 LAMTOR5O43504 91 aa23.93■■□□□ 1.42
PTP4A1-203ENST00000473334 RTN3O95197 1032 aaPredicted RBP23.93■■□□□ 1.42
PTP4A1-203ENST00000473334 CCDC130P13994 396 aa23.93■■□□□ 1.42
PTP4A1-203ENST00000473334 CTHP32929 405 aa23.93■■□□□ 1.42
PTP4A1-203ENST00000473334 IFRD2Q12894 506 aaPredicted RBP23.93■■□□□ 1.42
PTP4A1-203ENST00000473334 USP4Q13107 963 aa23.93■■□□□ 1.42
PTP4A1-203ENST00000473334 ITPRIPL2Q3MIP1 535 aa23.93■■□□□ 1.42
PTP4A1-203ENST00000473334 DCAF17Q5H9S7 520 aaPredicted RBP23.93■■□□□ 1.42
PTP4A1-203ENST00000473334 CC2D1AQ6P1N0 951 aaPredicted RBP23.93■■□□□ 1.42
PTP4A1-203ENST00000473334 FRMD5Q7Z6J6 570 aa23.93■■□□□ 1.42
PTP4A1-203ENST00000473334 FAXDC2Q96IV6 333 aa23.93■■□□□ 1.42
PTP4A1-203ENST00000473334 SLITRK1Q96PX8 696 aa23.93■■□□□ 1.42
PTP4A1-203ENST00000473334 KCNK16Q96T55 309 aa23.93■■□□□ 1.42
PTP4A1-203ENST00000473334 KRT82Q9NSB4 513 aa23.93■■□□□ 1.42
PTP4A1-203ENST00000473334 RAB20Q9NX57 234 aa23.93■■□□□ 1.42
PTP4A1-203ENST00000473334 CACNA1IQ9P0X4 2223 aa23.92■■□□□ 1.42
PTP4A1-203ENST00000473334 ZNF840PA6NDX5 716 aa23.92■■□□□ 1.42
PTP4A1-203ENST00000473334 AP1G2O75843 785 aa23.92■■□□□ 1.42
PTP4A1-203ENST00000473334 CD44P16070 742 aaKnown RBP23.92■■□□□ 1.42
PTP4A1-203ENST00000473334 HDCP19113 662 aa23.92■■□□□ 1.42
PTP4A1-203ENST00000473334 TAF10Q12962 218 aa23.92■■□□□ 1.42
PTP4A1-203ENST00000473334 MTF1Q14872 753 aa23.92■■□□□ 1.42
PTP4A1-203ENST00000473334 ZNF77Q15935 545 aa23.92■■□□□ 1.42
PTP4A1-203ENST00000473334 SLC2A14Q8TDB8 520 aa23.92■■□□□ 1.42
PTP4A1-203ENST00000473334 SEMA4DQ92854 862 aa23.92■■□□□ 1.42
PTP4A1-203ENST00000473334 TWNKQ96RR1 684 aa23.92■■□□□ 1.42
PTP4A1-203ENST00000473334 NT5C1AQ9BXI3 368 aa23.92■■□□□ 1.42
PTP4A1-203ENST00000473334 CHRDQ9H2X0 955 aa23.92■■□□□ 1.42
PTP4A1-203ENST00000473334 HPS4Q9NQG7 708 aa23.92■■□□□ 1.42
PTP4A1-203ENST00000473334 FAM49BQ9NUQ9 324 aa23.92■■□□□ 1.42
PTP4A1-203ENST00000473334 ARMCX3Q9UH62 379 aaPredicted RBP23.92■■□□□ 1.42
PTP4A1-203ENST00000473334 VPS13AQ96RL7 3174 aa23.92■■□□□ 1.42
PTP4A1-203ENST00000473334 MYO15AQ9UKN7 3530 aa23.92■■□□□ 1.42
PTP4A1-203ENST00000473334 SP9P0CG40 484 aa23.91■■□□□ 1.42
PTP4A1-203ENST00000473334 TCF3P15923 654 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms