RNA–Protein interactions for RNA: ENST00000473258.1

COL6A3-210, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 5,433 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-210ENST00000473258 HK2P52789 917 aa9.3□□□□□ -0.92
COL6A3-210ENST00000473258 PSME3P61289 254 aa9.3□□□□□ -0.92
COL6A3-210ENST00000473258 CHRNDQ07001 517 aa9.3□□□□□ -0.92
COL6A3-210ENST00000473258 SYTL3Q4VX76 610 aa9.3□□□□□ -0.92
COL6A3-210ENST00000473258 PYDC2Q56P42 97 aa9.3□□□□□ -0.92
COL6A3-210ENST00000473258 NIPAL1Q6NVV3 410 aa9.3□□□□□ -0.92
COL6A3-210ENST00000473258 PAGE2Q7Z2X7 111 aa9.3□□□□□ -0.92
COL6A3-210ENST00000473258 GALNT7Q86SF2 657 aa9.3□□□□□ -0.92
COL6A3-210ENST00000473258 ANKMY2Q8IV38 441 aa9.3□□□□□ -0.92
COL6A3-210ENST00000473258 NSUN7Q8NE18 718 aaKnown RBP9.3□□□□□ -0.92
COL6A3-210ENST00000473258 RFFLQ8WZ73 363 aa9.3□□□□□ -0.92
COL6A3-210ENST00000473258 PAGE5Q96GU1 130 aa9.3□□□□□ -0.92
COL6A3-210ENST00000473258 SLC4A9Q96Q91 983 aa9.3□□□□□ -0.92
COL6A3-210ENST00000473258 KLF6Q99612 283 aaPredicted RBP9.3□□□□□ -0.92
COL6A3-210ENST00000473258 TSEN34Q9BSV6 310 aaKnown RBP9.3□□□□□ -0.92
COL6A3-210ENST00000473258 C1QTNF1Q9BXJ1 281 aa9.3□□□□□ -0.92
COL6A3-210ENST00000473258 FOXP1Q9H334 677 aaPredicted RBP9.3□□□□□ -0.92
COL6A3-210ENST00000473258 CMTM6Q9NX76 183 aa9.3□□□□□ -0.92
COL6A3-210ENST00000473258 AP4B1Q9Y6B7 739 aa9.3□□□□□ -0.92
COL6A3-210ENST00000473258 PORP16435 677 aaPredicted RBP9.3□□□□□ -0.92
COL6A3-210ENST00000473258 IL4RP24394 825 aa9.3□□□□□ -0.92
COL6A3-210ENST00000473258 ADD1P35611 737 aaKnown RBP9.3□□□□□ -0.92
COL6A3-210ENST00000473258 MAGEA4P43358 317 aa9.3□□□□□ -0.92
COL6A3-210ENST00000473258 NFIAQ12857 509 aa9.3□□□□□ -0.92
COL6A3-210ENST00000473258 EMC2Q15006 297 aa9.3□□□□□ -0.92
COL6A3-210ENST00000473258 PARP6Q2NL67 630 aa9.3□□□□□ -0.92
COL6A3-210ENST00000473258 OTUD3Q5T2D3 398 aaPredicted RBP9.3□□□□□ -0.92
COL6A3-210ENST00000473258 SEL1L3Q68CR1 1132 aa9.3□□□□□ -0.92
COL6A3-210ENST00000473258 MZT2AQ6P582 158 aa9.3□□□□□ -0.92
COL6A3-210ENST00000473258 C4orf50Q6ZRC1 276 aa9.3□□□□□ -0.92
COL6A3-210ENST00000473258 CCNJLQ8IV13 435 aa9.3□□□□□ -0.92
COL6A3-210ENST00000473258 FMR1NBQ8N0W7 255 aaPredicted RBP9.3□□□□□ -0.92
COL6A3-210ENST00000473258 CACTIN-AS1Q8N1I8 211 aa9.3□□□□□ -0.92
COL6A3-210ENST00000473258 TC2NQ8N9U0 490 aa9.3□□□□□ -0.92
COL6A3-210ENST00000473258 RIBC2Q9H4K1 309 aa9.3□□□□□ -0.92
COL6A3-210ENST00000473258 PSTPIP2Q9H939 334 aa9.3□□□□□ -0.92
COL6A3-210ENST00000473258 RAD18Q9NS91 495 aa9.3□□□□□ -0.92
COL6A3-210ENST00000473258 MAD2L2Q9UI95 211 aa9.3□□□□□ -0.92
COL6A3-210ENST00000473258 PFASO15067 1338 aa9.29□□□□□ -0.92
COL6A3-210ENST00000473258 HEATR9A2RTY3 570 aa9.29□□□□□ -0.92
COL6A3-210ENST00000473258 H0YJX3 145 aa9.29□□□□□ -0.92
COL6A3-210ENST00000473258 SNX3O60493 162 aa9.29□□□□□ -0.92
COL6A3-210ENST00000473258 PDIA3P30101 505 aaKnown RBP9.29□□□□□ -0.92
COL6A3-210ENST00000473258 PPP3CCP48454 512 aa9.29□□□□□ -0.92
COL6A3-210ENST00000473258 ARSEP51690 589 aa9.29□□□□□ -0.92
COL6A3-210ENST00000473258 AQP5P55064 265 aa9.29□□□□□ -0.92
COL6A3-210ENST00000473258 LSM3P62310 102 aaKnown RBP9.29□□□□□ -0.92
COL6A3-210ENST00000473258 RIPPLY1Q0D2K3 151 aa9.29□□□□□ -0.92
COL6A3-210ENST00000473258 NRF1Q16656 503 aa9.29□□□□□ -0.92
COL6A3-210ENST00000473258 ANKDD1AQ495B1 522 aa9.29□□□□□ -0.92
COL6A3-210ENST00000473258 TRAPPC11Q7Z392 1133 aa9.29□□□□□ -0.92
COL6A3-210ENST00000473258 KRT26Q7Z3Y9 468 aa9.29□□□□□ -0.92
COL6A3-210ENST00000473258 CDAN1Q8IWY9 1227 aa9.29□□□□□ -0.92
COL6A3-210ENST00000473258 C8orf59Q8N0T1 100 aaPredicted RBP9.29□□□□□ -0.92
COL6A3-210ENST00000473258 C1orf131Q8NDD1 294 aaKnown RBP9.29□□□□□ -0.92
COL6A3-210ENST00000473258 TDRD1Q9BXT4 1180 aaKnown RBP9.29□□□□□ -0.92
COL6A3-210ENST00000473258 NEK6Q9HC98 313 aa9.29□□□□□ -0.92
COL6A3-210ENST00000473258 TRMT112Q9UI30 125 aaKnown RBP9.29□□□□□ -0.92
COL6A3-210ENST00000473258 CARMIL3Q8ND23 1372 aa9.29□□□□□ -0.92
COL6A3-210ENST00000473258 RALGAPBQ86X10 1494 aa9.29□□□□□ -0.92
COL6A3-210ENST00000473258 SYNDIG1LA6NDD5 238 aa9.29□□□□□ -0.92
COL6A3-210ENST00000473258 CCDC154A6NI56 674 aa9.29□□□□□ -0.92
COL6A3-210ENST00000473258 KIF28PB7ZC32 967 aa9.29□□□□□ -0.92
COL6A3-210ENST00000473258 PRPSAP2O60256 369 aa9.29□□□□□ -0.92
COL6A3-210ENST00000473258 ME2P23368 584 aa9.29□□□□□ -0.92
COL6A3-210ENST00000473258 SSTP61278 116 aa9.29□□□□□ -0.92
COL6A3-210ENST00000473258 PTH1RQ03431 593 aa9.29□□□□□ -0.92
COL6A3-210ENST00000473258 NFE2L1Q14494 772 aa9.29□□□□□ -0.92
COL6A3-210ENST00000473258 TBRG1Q3YBR2 411 aa9.29□□□□□ -0.92
COL6A3-210ENST00000473258 PPP2R2DQ66LE6 453 aa9.29□□□□□ -0.92
COL6A3-210ENST00000473258 TTI2Q6NXR4 508 aa9.29□□□□□ -0.92
COL6A3-210ENST00000473258 KLHL35Q6PF15 583 aa9.29□□□□□ -0.92
COL6A3-210ENST00000473258 BLIDQ8IZY5 108 aa9.29□□□□□ -0.92
COL6A3-210ENST00000473258 EPS8L3Q8TE67 593 aaKnown RBP9.29□□□□□ -0.92
COL6A3-210ENST00000473258 HPS3Q969F9 1004 aa9.29□□□□□ -0.92
COL6A3-210ENST00000473258 ITPKCQ96DU7 683 aa9.29□□□□□ -0.92
COL6A3-210ENST00000473258 FRMD8Q9BZ67 464 aaPredicted RBP9.29□□□□□ -0.92
COL6A3-210ENST00000473258 TMEM168Q9H0V1 697 aa9.29□□□□□ -0.92
COL6A3-210ENST00000473258 TMEM138Q9NPI0 162 aa9.29□□□□□ -0.92
COL6A3-210ENST00000473258 POLG2Q9UHN1 485 aa9.29□□□□□ -0.92
COL6A3-210ENST00000473258 GNPTGQ9UJJ9 305 aa9.29□□□□□ -0.92
COL6A3-210ENST00000473258 PLOD2O00469 737 aa9.29□□□□□ -0.92
COL6A3-210ENST00000473258 DDAH1O94760 285 aa9.29□□□□□ -0.92
COL6A3-210ENST00000473258 FOSP01100 380 aaPredicted RBP9.29□□□□□ -0.92
COL6A3-210ENST00000473258 SERPINB5P36952 375 aa9.29□□□□□ -0.92
COL6A3-210ENST00000473258 ECT2LQ008S8 904 aa9.29□□□□□ -0.92
COL6A3-210ENST00000473258 CLCA4Q14CN2 919 aa9.29□□□□□ -0.92
COL6A3-210ENST00000473258 DDI2Q5TDH0 399 aa9.29□□□□□ -0.92
COL6A3-210ENST00000473258 KLHL24Q6TFL4 600 aa9.29□□□□□ -0.92
COL6A3-210ENST00000473258 GALNT12Q8IXK2 581 aa9.29□□□□□ -0.92
COL6A3-210ENST00000473258 IZUMO1Q8IYV9 350 aa9.29□□□□□ -0.92
COL6A3-210ENST00000473258 KBTBD3Q8NAB2 608 aa9.29□□□□□ -0.92
COL6A3-210ENST00000473258 DPF2Q92785 391 aa9.29□□□□□ -0.92
COL6A3-210ENST00000473258 KAT2BQ92831 832 aa9.29□□□□□ -0.92
COL6A3-210ENST00000473258 DNAJC1Q96KC8 554 aaKnown RBP9.29□□□□□ -0.92
COL6A3-210ENST00000473258 MED28Q9H204 178 aa9.29□□□□□ -0.92
COL6A3-210ENST00000473258 UBE2TQ9NPD8 197 aaPredicted RBP9.29□□□□□ -0.92
COL6A3-210ENST00000473258 NEU2Q9Y3R4 380 aa9.29□□□□□ -0.92
COL6A3-210ENST00000473258 USP19O94966 1318 aa9.29□□□□□ -0.92
COL6A3-210ENST00000473258 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms