RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 TNNT3P45378 269 aaPredicted RBP2.97□□□□□ -1.93
XRN1-210ENST00000472697 RRADP55042 308 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 CYP4F8P98187 520 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 MC1RQ01726 317 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 RNASELQ05823 741 aaKnown RBP2.97□□□□□ -1.93
XRN1-210ENST00000472697 CDC16Q13042 620 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 IRF3Q14653 427 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 TBR1Q16650 682 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 C1orf141Q5JVX7 400 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 ZMYM1Q5SVZ6 1142 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 HIST2H2BCQ6DN03 193 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 HIST2H2BDQ6DRA6 164 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 NFRKBQ6P4R8 1299 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 CD300LDQ6UXZ3 194 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 IKBIPQ70UQ0 350 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 HSCBQ8IWL3 235 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 WDTC1Q8N5D0 677 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 Q8NA96 180 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 FAM46DQ8NEK8 389 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 PPP1R14CQ8TAE6 165 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 SHKBP1Q8TBC3 707 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 APOPT1Q96IL0 206 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 HIST1H2AHQ96KK5 128 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 ALPK1Q96QP1 1244 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 PIP5K1AQ99755 562 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 HIST1H2AJQ99878 128 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 SEZ6LQ9BYH1 1024 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 CEP41Q9BYV8 373 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 TINAGL1Q9GZM7 467 aaPredicted RBP2.97□□□□□ -1.93
XRN1-210ENST00000472697 GRPEL1Q9HAV7 217 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 HEYLQ9NQ87 328 aaPredicted RBP2.97□□□□□ -1.93
XRN1-210ENST00000472697 NECTIN3Q9NQS3 549 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 DTLQ9NZJ0 730 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 KCMF1Q9P0J7 381 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 TTLL3Q9Y4R7 772 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 DISP1Q96F81 1524 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 SOS1Q07889 1333 aaPredicted RBP2.97□□□□□ -1.93
XRN1-210ENST00000472697 TCOF1Q13428 1488 aaKnown RBP2.97□□□□□ -1.93
XRN1-210ENST00000472697 DEPDC5O75140 1603 aa2.97□□□□□ -1.93
XRN1-210ENST00000472697 A0A1W2PQ09 198 aa2.96□□□□□ -1.93
XRN1-210ENST00000472697 A0A1W2PQ45 241 aaPredicted RBP2.96□□□□□ -1.93
XRN1-210ENST00000472697 A0A1W2PQY0 241 aa2.96□□□□□ -1.93
XRN1-210ENST00000472697 TRIM64A6NGJ6 449 aa2.96□□□□□ -1.93
XRN1-210ENST00000472697 NPIPB15A6NHN6 443 aaPredicted RBP2.96□□□□□ -1.93
XRN1-210ENST00000472697 TRIM64BA6NI03 449 aa2.96□□□□□ -1.93
XRN1-210ENST00000472697 AGAP5A6NIR3 686 aa2.96□□□□□ -1.93
XRN1-210ENST00000472697 B4DLN1 442 aa2.96□□□□□ -1.93
XRN1-210ENST00000472697 E7EVH7 732 aa2.96□□□□□ -1.93
XRN1-210ENST00000472697 MSTNO14793 375 aa2.96□□□□□ -1.93
XRN1-210ENST00000472697 SLC16A6O15403 523 aa2.96□□□□□ -1.93
XRN1-210ENST00000472697 EIF4EBP3O60516 100 aaPredicted RBP2.96□□□□□ -1.93
XRN1-210ENST00000472697 C22orf31O95567 290 aa2.96□□□□□ -1.93
XRN1-210ENST00000472697 GCH1P30793 250 aa2.96□□□□□ -1.93
XRN1-210ENST00000472697 CLK1P49759 484 aaKnown RBP2.96□□□□□ -1.93
XRN1-210ENST00000472697 KCNQ1P51787 676 aa2.96□□□□□ -1.93
XRN1-210ENST00000472697 ZNF200P98182 395 aaPredicted RBP2.96□□□□□ -1.93
XRN1-210ENST00000472697 CREB5Q02930 508 aa2.96□□□□□ -1.93
XRN1-210ENST00000472697 LY6KQ17RY6 165 aa2.96□□□□□ -1.93
XRN1-210ENST00000472697 VWA3BQ502W6 1294 aa2.96□□□□□ -1.93
XRN1-210ENST00000472697 PRR16Q569H4 304 aa2.96□□□□□ -1.93
XRN1-210ENST00000472697 PLAG1Q6DJT9 500 aa2.96□□□□□ -1.93
XRN1-210ENST00000472697 ABLIM2Q6H8Q1 611 aa2.96□□□□□ -1.93
XRN1-210ENST00000472697 RINT1Q6NUQ1 792 aa2.96□□□□□ -1.93
XRN1-210ENST00000472697 RPTNQ6XPR3 784 aa2.96□□□□□ -1.93
XRN1-210ENST00000472697 SLC30A10Q6XR72 485 aa2.96□□□□□ -1.93
XRN1-210ENST00000472697 NFXL1Q6ZNB6 911 aa2.96□□□□□ -1.93
XRN1-210ENST00000472697 KRT28Q7Z3Y7 464 aa2.96□□□□□ -1.93
XRN1-210ENST00000472697 CPLX4Q7Z7G2 160 aa2.96□□□□□ -1.93
XRN1-210ENST00000472697 VSIG1Q86XK7 387 aa2.96□□□□□ -1.93
XRN1-210ENST00000472697 Q8N3U1 123 aa2.96□□□□□ -1.93
XRN1-210ENST00000472697 PLD5Q8N7P1 536 aa2.96□□□□□ -1.93
XRN1-210ENST00000472697 BEND7Q8N7W2 519 aaPredicted RBP2.96□□□□□ -1.93
XRN1-210ENST00000472697 RNF169Q8NCN4 708 aa2.96□□□□□ -1.93
XRN1-210ENST00000472697 TOE1Q96GM8 510 aaKnown RBP2.96□□□□□ -1.93
XRN1-210ENST00000472697 DCAF5Q96JK2 942 aa2.96□□□□□ -1.93
XRN1-210ENST00000472697 CCDC177Q9NQR7 707 aaPredicted RBP2.96□□□□□ -1.93
XRN1-210ENST00000472697 DECR2Q9NUI1 292 aa2.96□□□□□ -1.93
XRN1-210ENST00000472697 NKIRAS2Q9NYR9 191 aa2.96□□□□□ -1.93
XRN1-210ENST00000472697 WDR35Q9P2L0 1181 aa2.96□□□□□ -1.93
XRN1-210ENST00000472697 HDAC6Q9UBN7 1215 aa2.96□□□□□ -1.93
XRN1-210ENST00000472697 DBR1Q9UK59 544 aaKnown RBP2.96□□□□□ -1.93
XRN1-210ENST00000472697 RBM8AQ9Y5S9 174 aaKnown RBP2.96□□□□□ -1.93
XRN1-210ENST00000472697 KIF27Q86VH2 1401 aa2.96□□□□□ -1.93
XRN1-210ENST00000472697 TRAPPC8Q9Y2L5 1435 aa2.96□□□□□ -1.93
XRN1-210ENST00000472697 ATP10AO60312 1499 aa2.96□□□□□ -1.94
XRN1-210ENST00000472697 CAMSAP1Q5T5Y3 1602 aa2.96□□□□□ -1.94
XRN1-210ENST00000472697 CDK13Q14004 1512 aaKnown RBP2.96□□□□□ -1.94
XRN1-210ENST00000472697 PTGES3LE9PB15 166 aa2.96□□□□□ -1.94
XRN1-210ENST00000472697 GNB5O14775 395 aa2.96□□□□□ -1.94
XRN1-210ENST00000472697 ADAM20O43506 726 aa2.96□□□□□ -1.94
XRN1-210ENST00000472697 FSBPO95073 299 aa2.96□□□□□ -1.94
XRN1-210ENST00000472697 CD8BP10966 210 aa2.96□□□□□ -1.94
XRN1-210ENST00000472697 NPPBP16860 134 aa2.96□□□□□ -1.94
XRN1-210ENST00000472697 APEX1P27695 318 aaKnown RBP2.96□□□□□ -1.94
XRN1-210ENST00000472697 SLC6A11P48066 632 aa2.96□□□□□ -1.94
XRN1-210ENST00000472697 AP1B1Q10567 949 aa2.96□□□□□ -1.94
XRN1-210ENST00000472697 MMEL1Q495T6 779 aa2.96□□□□□ -1.94
XRN1-210ENST00000472697 RILPL1Q5EBL4 403 aa2.96□□□□□ -1.94
XRN1-210ENST00000472697 TTC22Q5TAA0 569 aa2.96□□□□□ -1.94
XRN1-210ENST00000472697 UTP14CQ5TAP6 766 aaKnown RBP2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms