RNA–Protein interactions for RNA: ENST00000471880.5

SSR4-208, Transcript of signal sequence receptor subunit 4, human

TSL 5

Gene SSR4, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSR4-208	ENST00000471880	TMEM150A	Q86TG1	271 aa		15.73	■□□□□ 0.11
SSR4-208	ENST00000471880	CELF5	Q8N6W0	485 aa	Known RBP	15.73	■□□□□ 0.11
SSR4-208	ENST00000471880	PJA1	Q8NG27	643 aa		15.73	■□□□□ 0.11
SSR4-208	ENST00000471880	SLC2A14	Q8TDB8	520 aa		15.73	■□□□□ 0.11
SSR4-208	ENST00000471880	BPIFB1	Q8TDL5	484 aa		15.73	■□□□□ 0.11
SSR4-208	ENST00000471880	SEMA4D	Q92854	862 aa		15.73	■□□□□ 0.11
SSR4-208	ENST00000471880	DNASE1L2	Q92874	299 aa		15.73	■□□□□ 0.11
SSR4-208	ENST00000471880	TRMT2B	Q96GJ1	504 aa	Known RBP	15.73	■□□□□ 0.11
SSR4-208	ENST00000471880	SMARCD1	Q96GM5	515 aa		15.73	■□□□□ 0.11
SSR4-208	ENST00000471880	SPATA17	Q96L03	361 aa		15.73	■□□□□ 0.11
SSR4-208	ENST00000471880	APOBEC3G	Q9HC16	384 aa	Known RBP	15.73	■□□□□ 0.11
SSR4-208	ENST00000471880	TRPM5	Q9NZQ8	1165 aa		15.73	■□□□□ 0.11
SSR4-208	ENST00000471880	ZMYM5	Q9UJ78	669 aa		15.73	■□□□□ 0.11
SSR4-208	ENST00000471880	PIAS3	Q9Y6X2	628 aa		15.73	■□□□□ 0.11
SSR4-208	ENST00000471880	PPP1R3G	B7ZBB8	358 aa		15.72	■□□□□ 0.11
SSR4-208	ENST00000471880	STARD6	P59095	220 aa		15.72	■□□□□ 0.11
SSR4-208	ENST00000471880	ENPEP	Q07075	957 aa		15.72	■□□□□ 0.11
SSR4-208	ENST00000471880	CBWD6	Q4V339	395 aa		15.72	■□□□□ 0.11
SSR4-208	ENST00000471880	ARHGAP29	Q52LW3	1261 aa		15.72	■□□□□ 0.11
SSR4-208	ENST00000471880	CBWD3	Q5JTY5	395 aa		15.72	■□□□□ 0.11
SSR4-208	ENST00000471880	CBWD5	Q5RIA9	395 aa		15.72	■□□□□ 0.11
SSR4-208	ENST00000471880	MON1A	Q86VX9	555 aa		15.72	■□□□□ 0.11
SSR4-208	ENST00000471880	UNC93A	Q86WB7	457 aa		15.72	■□□□□ 0.11
SSR4-208	ENST00000471880	ARL14EP	Q8N8R7	260 aa	Predicted RBP	15.72	■□□□□ 0.11
SSR4-208	ENST00000471880	C12orf29	Q8N999	325 aa		15.72	■□□□□ 0.11
SSR4-208	ENST00000471880	DTWD2	Q8NBA8	298 aa		15.72	■□□□□ 0.11
SSR4-208	ENST00000471880	FBXO32	Q969P5	355 aa		15.72	■□□□□ 0.11
SSR4-208	ENST00000471880	C8orf48	Q96LL4	319 aa		15.72	■□□□□ 0.11
SSR4-208	ENST00000471880	CEP63	Q96MT8	703 aa		15.72	■□□□□ 0.11
SSR4-208	ENST00000471880	SLITRK1	Q96PX8	696 aa		15.72	■□□□□ 0.11
SSR4-208	ENST00000471880	CYP2S1	Q96SQ9	504 aa		15.72	■□□□□ 0.11
SSR4-208	ENST00000471880	KCNK16	Q96T55	309 aa		15.72	■□□□□ 0.11
SSR4-208	ENST00000471880	NT5C1A	Q9BXI3	368 aa		15.72	■□□□□ 0.11
SSR4-208	ENST00000471880	BCO2	Q9BYV7	579 aa		15.72	■□□□□ 0.11
SSR4-208	ENST00000471880	CYP3A43	Q9HB55	503 aa		15.72	■□□□□ 0.11
SSR4-208	ENST00000471880	METTL14	Q9HCE5	456 aa	Known RBP	15.72	■□□□□ 0.11
SSR4-208	ENST00000471880	DMAP1	Q9NPF5	467 aa	Predicted RBP	15.72	■□□□□ 0.11
SSR4-208	ENST00000471880	TDP1	Q9NUW8	608 aa		15.72	■□□□□ 0.11
SSR4-208	ENST00000471880	KIAA1468	Q9P260	1216 aa		15.72	■□□□□ 0.11
SSR4-208	ENST00000471880	CCL26	Q9Y258	94 aa		15.72	■□□□□ 0.11
SSR4-208	ENST00000471880	MRPS17	Q9Y2R5	130 aa	Known RBP	15.72	■□□□□ 0.11
SSR4-208	ENST00000471880	HELZ	P42694	1942 aa	Known RBP	15.71	■□□□□ 0.11
SSR4-208	ENST00000471880	C2orf78	A6NCI8	922 aa		15.71	■□□□□ 0.11
SSR4-208	ENST00000471880	SHISA7	A6NL88	538 aa		15.71	■□□□□ 0.11
SSR4-208	ENST00000471880	CHAD	O15335	359 aa		15.71	■□□□□ 0.11
SSR4-208	ENST00000471880	TADA3	O75528	432 aa		15.71	■□□□□ 0.11
SSR4-208	ENST00000471880	USP17L7	P0C7H9	530 aa		15.71	■□□□□ 0.11
SSR4-208	ENST00000471880	BMP6	P22004	513 aa		15.71	■□□□□ 0.11
SSR4-208	ENST00000471880	SOX9	P48436	509 aa		15.71	■□□□□ 0.11
SSR4-208	ENST00000471880	MAP3K7CL	P57077	242 aa		15.71	■□□□□ 0.11
SSR4-208	ENST00000471880	TAF10	Q12962	218 aa		15.71	■□□□□ 0.11
SSR4-208	ENST00000471880	TPD52L1	Q16890	204 aa	Predicted RBP	15.71	■□□□□ 0.11
SSR4-208	ENST00000471880	CCDC105	Q8IYK2	499 aa		15.71	■□□□□ 0.11
SSR4-208	ENST00000471880	NUP93	Q8N1F7	819 aa		15.71	■□□□□ 0.11
SSR4-208	ENST00000471880	USP13	Q92995	863 aa	Predicted RBP	15.71	■□□□□ 0.11
SSR4-208	ENST00000471880	MYRFL	Q96LU7	910 aa		15.71	■□□□□ 0.11
SSR4-208	ENST00000471880	HEXIM2	Q96MH2	286 aa	Known RBP	15.71	■□□□□ 0.11
SSR4-208	ENST00000471880	GBP4	Q96PP9	640 aa		15.71	■□□□□ 0.11
SSR4-208	ENST00000471880	TWNK	Q96RR1	684 aa		15.71	■□□□□ 0.11
SSR4-208	ENST00000471880	DUSP9	Q99956	384 aa	Known RBP	15.71	■□□□□ 0.11
SSR4-208	ENST00000471880	LTB4R2	Q9NPC1	389 aa		15.71	■□□□□ 0.11
SSR4-208	ENST00000471880	MTF2	Q9Y483	593 aa	Predicted RBP	15.71	■□□□□ 0.11
SSR4-208	ENST00000471880	ATG2B	Q96BY7	2078 aa		15.71	■□□□□ 0.1
SSR4-208	ENST00000471880	MAN2B1	O00754	1011 aa		15.7	■□□□□ 0.1
SSR4-208	ENST00000471880	NCAM2	O15394	837 aa		15.7	■□□□□ 0.1
SSR4-208	ENST00000471880	RTN3	O95197	1032 aa	Predicted RBP	15.7	■□□□□ 0.1
SSR4-208	ENST00000471880	FAM200B	P0CF97	657 aa		15.7	■□□□□ 0.1
SSR4-208	ENST00000471880	HDC	P19113	662 aa		15.7	■□□□□ 0.1
SSR4-208	ENST00000471880	YWHAQ	P27348	245 aa		15.7	■□□□□ 0.1
SSR4-208	ENST00000471880	TNK2	Q07912	1038 aa		15.7	■□□□□ 0.1
SSR4-208	ENST00000471880	FCHO2	Q0JRZ9	810 aa		15.7	■□□□□ 0.1
SSR4-208	ENST00000471880	TTI2	Q6NXR4	508 aa		15.7	■□□□□ 0.1
SSR4-208	ENST00000471880	FRMD5	Q7Z6J6	570 aa		15.7	■□□□□ 0.1
SSR4-208	ENST00000471880	FILIP1	Q7Z7B0	1213 aa		15.7	■□□□□ 0.1
SSR4-208	ENST00000471880	ZC3H3	Q8IXZ2	948 aa	Known RBP	15.7	■□□□□ 0.1
SSR4-208	ENST00000471880	FUK	Q8N0W3	1084 aa		15.7	■□□□□ 0.1
SSR4-208	ENST00000471880	TRIML1	Q8N9V2	468 aa		15.7	■□□□□ 0.1
SSR4-208	ENST00000471880	FAM3C	Q92520	227 aa		15.7	■□□□□ 0.1
SSR4-208	ENST00000471880	TATDN2	Q93075	761 aa		15.7	■□□□□ 0.1
SSR4-208	ENST00000471880	CYFIP2	Q96F07	1278 aa		15.7	■□□□□ 0.1
SSR4-208	ENST00000471880	LRRC3B	Q96PB8	259 aa		15.7	■□□□□ 0.1
SSR4-208	ENST00000471880	SLC22A12	Q96S37	553 aa		15.7	■□□□□ 0.1
SSR4-208	ENST00000471880	ARID3A	Q99856	593 aa		15.7	■□□□□ 0.1
SSR4-208	ENST00000471880	SRRT	Q9BXP5	876 aa	Known RBP	15.7	■□□□□ 0.1
SSR4-208	ENST00000471880	NACA2	Q9H009	215 aa		15.7	■□□□□ 0.1
SSR4-208	ENST00000471880	KIF9	Q9HAQ2	790 aa		15.7	■□□□□ 0.1
SSR4-208	ENST00000471880	GKN1	Q9NS71	199 aa		15.7	■□□□□ 0.1
SSR4-208	ENST00000471880	TMEM30A	Q9NV96	361 aa		15.7	■□□□□ 0.1
SSR4-208	ENST00000471880	SPATA6	Q9NWH7	488 aa	Predicted RBP	15.7	■□□□□ 0.1
SSR4-208	ENST00000471880	OBP2A	Q9NY56	170 aa		15.7	■□□□□ 0.1
SSR4-208	ENST00000471880	GTSE1	Q9NYZ3	720 aa		15.7	■□□□□ 0.1
SSR4-208	ENST00000471880	VPS13A	Q96RL7	3174 aa		15.7	■□□□□ 0.1
SSR4-208	ENST00000471880	FGFR1OP	O95684	399 aa	Known RBP	15.69	■□□□□ 0.1
SSR4-208	ENST00000471880	TARS	P26639	723 aa	Known RBP	15.69	■□□□□ 0.1
SSR4-208	ENST00000471880	FMO5	P49326	533 aa		15.69	■□□□□ 0.1
SSR4-208	ENST00000471880	PDE6C	P51160	858 aa		15.69	■□□□□ 0.1
SSR4-208	ENST00000471880	NUBP1	P53384	320 aa		15.69	■□□□□ 0.1
SSR4-208	ENST00000471880	SLC5A3	P53794	718 aa		15.69	■□□□□ 0.1
SSR4-208	ENST00000471880	PLCB2	Q00722	1185 aa		15.69	■□□□□ 0.1
SSR4-208	ENST00000471880	CETN1	Q12798	172 aa		15.69	■□□□□ 0.1

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