RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 BEST2Q8NFU1 509 aa11.14□□□□□ -0.63
APLF-204ENST00000471727 TEKT4Q8WW24 435 aa11.14□□□□□ -0.63
APLF-204ENST00000471727 CCT6BQ92526 530 aa11.14□□□□□ -0.63
APLF-204ENST00000471727 PRCCQ92733 491 aaPredicted RBP11.14□□□□□ -0.63
APLF-204ENST00000471727 KIF12Q96FN5 646 aa11.14□□□□□ -0.63
APLF-204ENST00000471727 CPB2Q96IY4 423 aa11.14□□□□□ -0.63
APLF-204ENST00000471727 TWNKQ96RR1 684 aa11.14□□□□□ -0.63
APLF-204ENST00000471727 FAM118BQ9BPY3 351 aa11.14□□□□□ -0.63
APLF-204ENST00000471727 TMEM121Q9BTD3 319 aa11.14□□□□□ -0.63
APLF-204ENST00000471727 GBA2Q9HCG7 927 aaPredicted RBP11.14□□□□□ -0.63
APLF-204ENST00000471727 SSU72Q9NP77 194 aaKnown RBP11.14□□□□□ -0.63
APLF-204ENST00000471727 DNAJC17Q9NVM6 304 aaKnown RBP11.14□□□□□ -0.63
APLF-204ENST00000471727 FAM47DPA6NHR8 397 aa11.13□□□□□ -0.63
APLF-204ENST00000471727 C2CD4BA6NLJ0 364 aa11.13□□□□□ -0.63
APLF-204ENST00000471727 RASA4BC9J798 803 aa11.13□□□□□ -0.63
APLF-204ENST00000471727 E7ESA3 106 aa11.13□□□□□ -0.63
APLF-204ENST00000471727 RASA4O43374 803 aa11.13□□□□□ -0.63
APLF-204ENST00000471727 PRPSAP2O60256 369 aa11.13□□□□□ -0.63
APLF-204ENST00000471727 SNX3O60493 162 aa11.13□□□□□ -0.63
APLF-204ENST00000471727 SPAG6O75602 509 aa11.13□□□□□ -0.63
APLF-204ENST00000471727 SNAI1O95863 264 aaPredicted RBP11.13□□□□□ -0.63
APLF-204ENST00000471727 IFNB1P01574 187 aa11.13□□□□□ -0.63
APLF-204ENST00000471727 MMP3P08254 477 aa11.13□□□□□ -0.63
APLF-204ENST00000471727 PDGFRAP16234 1089 aa11.13□□□□□ -0.63
APLF-204ENST00000471727 ADCYAP1R1P41586 468 aa11.13□□□□□ -0.63
APLF-204ENST00000471727 CTCFP49711 727 aaPredicted RBP11.13□□□□□ -0.63
APLF-204ENST00000471727 EIF3EP60228 445 aaKnown RBP11.13□□□□□ -0.63
APLF-204ENST00000471727 GRB14Q14449 540 aa11.13□□□□□ -0.63
APLF-204ENST00000471727 CCDC38Q502W7 563 aa11.13□□□□□ -0.63
APLF-204ENST00000471727 ANKRD20A8PQ5CZ79 823 aa11.13□□□□□ -0.63
APLF-204ENST00000471727 TMEM63BQ5T3F8 832 aa11.13□□□□□ -0.63
APLF-204ENST00000471727 OR6B2Q6IFH4 312 aa11.13□□□□□ -0.63
APLF-204ENST00000471727 SLC27A1Q6PCB7 646 aa11.13□□□□□ -0.63
APLF-204ENST00000471727 ARCQ7LC44 396 aa11.13□□□□□ -0.63
APLF-204ENST00000471727 TRABD2AQ86V40 505 aa11.13□□□□□ -0.63
APLF-204ENST00000471727 PDIK1LQ8N165 341 aa11.13□□□□□ -0.63
APLF-204ENST00000471727 NAT8LQ8N9F0 302 aa11.13□□□□□ -0.63
APLF-204ENST00000471727 OR6J1Q8NGC5 347 aa11.13□□□□□ -0.63
APLF-204ENST00000471727 PYROXD1Q8WU10 500 aa11.13□□□□□ -0.63
APLF-204ENST00000471727 OSBPL7Q9BZF2 842 aa11.13□□□□□ -0.63
APLF-204ENST00000471727 PRDM16Q9HAZ2 1276 aa11.13□□□□□ -0.63
APLF-204ENST00000471727 PSMC3IPQ9P2W1 217 aaPredicted RBP11.13□□□□□ -0.63
APLF-204ENST00000471727 HESX1Q9UBX0 185 aa11.13□□□□□ -0.63
APLF-204ENST00000471727 TSPAN16Q9UKR8 245 aa11.13□□□□□ -0.63
APLF-204ENST00000471727 ZMYND8Q9ULU4 1186 aaPredicted RBP11.13□□□□□ -0.63
APLF-204ENST00000471727 USP15Q9Y4E8 981 aaPredicted RBP11.13□□□□□ -0.63
APLF-204ENST00000471727 NRCAMQ92823 1304 aa11.13□□□□□ -0.63
APLF-204ENST00000471727 SMIM35A0A1B0GVV1 85 aa11.13□□□□□ -0.63
APLF-204ENST00000471727 GLTPD2A6NH11 291 aa11.13□□□□□ -0.63
APLF-204ENST00000471727 SLC15A5A6NIM6 579 aa11.13□□□□□ -0.63
APLF-204ENST00000471727 DNAJC8O75937 253 aaPredicted RBP11.13□□□□□ -0.63
APLF-204ENST00000471727 CD4P01730 458 aa11.13□□□□□ -0.63
APLF-204ENST00000471727 FAM163BP0C2L3 166 aa11.13□□□□□ -0.63
APLF-204ENST00000471727 ZSCAN5DPP0CG00 497 aa11.13□□□□□ -0.63
APLF-204ENST00000471727 TGM2P21980 687 aa11.13□□□□□ -0.63
APLF-204ENST00000471727 RPL22P35268 128 aaKnown RBP11.13□□□□□ -0.63
APLF-204ENST00000471727 ROR1Q01973 937 aa11.13□□□□□ -0.63
APLF-204ENST00000471727 PDIA2Q13087 525 aaKnown RBP11.13□□□□□ -0.63
APLF-204ENST00000471727 ACVR2BQ13705 512 aa11.13□□□□□ -0.63
APLF-204ENST00000471727 NOMO1Q15155 1222 aa11.13□□□□□ -0.63
APLF-204ENST00000471727 EFHC2Q5JST6 749 aa11.13□□□□□ -0.63
APLF-204ENST00000471727 MARCH8Q5T0T0 291 aa11.13□□□□□ -0.63
APLF-204ENST00000471727 ARHGAP17Q68EM7 881 aa11.13□□□□□ -0.63
APLF-204ENST00000471727 CYP4F22Q6NT55 531 aa11.13□□□□□ -0.63
APLF-204ENST00000471727 NOTUMQ6P988 496 aa11.13□□□□□ -0.63
APLF-204ENST00000471727 PLEKHH3Q7Z736 793 aa11.13□□□□□ -0.63
APLF-204ENST00000471727 TMEM110Q86TL2 294 aa11.13□□□□□ -0.63
APLF-204ENST00000471727 PACS2Q86VP3 889 aa11.13□□□□□ -0.63
APLF-204ENST00000471727 SESTD1Q86VW0 696 aa11.13□□□□□ -0.63
APLF-204ENST00000471727 ZBED8Q8IZ13 594 aa11.13□□□□□ -0.63
APLF-204ENST00000471727 EMC1Q8N766 993 aa11.13□□□□□ -0.63
APLF-204ENST00000471727 RXFP2Q8WXD0 754 aa11.13□□□□□ -0.63
APLF-204ENST00000471727 ALKBH8Q96BT7 664 aaKnown RBP11.13□□□□□ -0.63
APLF-204ENST00000471727 HAUS1Q96CS2 278 aa11.13□□□□□ -0.63
APLF-204ENST00000471727 MAML3Q96JK9 1138 aa11.13□□□□□ -0.63
APLF-204ENST00000471727 MS4A4AQ96JQ5 239 aa11.13□□□□□ -0.63
APLF-204ENST00000471727 PWWP2AQ96N64 755 aa11.13□□□□□ -0.63
APLF-204ENST00000471727 SMC6Q96SB8 1091 aa11.13□□□□□ -0.63
APLF-204ENST00000471727 PARK7Q99497 189 aaKnown RBP11.13□□□□□ -0.63
APLF-204ENST00000471727 ELAC2Q9BQ52 826 aaKnown RBP11.13□□□□□ -0.63
APLF-204ENST00000471727 TINF2Q9BSI4 451 aa11.13□□□□□ -0.63
APLF-204ENST00000471727 SLC4A5Q9BY07 1137 aa11.13□□□□□ -0.63
APLF-204ENST00000471727 VPS37BQ9H9H4 285 aa11.13□□□□□ -0.63
APLF-204ENST00000471727 ZSWIM8A7E2V4 1837 aa11.12□□□□□ -0.63
APLF-204ENST00000471727 CCL15-CCL14A0A0B4J2E2 113 aa11.12□□□□□ -0.63
APLF-204ENST00000471727 BTBD19C9JJ37 291 aa11.12□□□□□ -0.63
APLF-204ENST00000471727 ZNF286BP0CG31 522 aa11.12□□□□□ -0.63
APLF-204ENST00000471727 RBP3P10745 1247 aa11.12□□□□□ -0.63
APLF-204ENST00000471727 ZFXP17010 805 aaPredicted RBP11.12□□□□□ -0.63
APLF-204ENST00000471727 SDC4P31431 198 aa11.12□□□□□ -0.63
APLF-204ENST00000471727 GBP2P32456 591 aaPredicted RBP11.12□□□□□ -0.63
APLF-204ENST00000471727 PNPLA4P41247 253 aa11.12□□□□□ -0.63
APLF-204ENST00000471727 IFNAR2P48551 515 aa11.12□□□□□ -0.63
APLF-204ENST00000471727 CDH6P55285 790 aa11.12□□□□□ -0.63
APLF-204ENST00000471727 GEMIN4P57678 1058 aaKnown RBP11.12□□□□□ -0.63
APLF-204ENST00000471727 SLC6A3Q01959 620 aa11.12□□□□□ -0.63
APLF-204ENST00000471727 SPARCL1Q14515 664 aa11.12□□□□□ -0.63
APLF-204ENST00000471727 TMED2Q15363 201 aa11.12□□□□□ -0.63
APLF-204ENST00000471727 ZBTB6Q15916 424 aa11.12□□□□□ -0.63
APLF-204ENST00000471727 CCL15Q16663 113 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms