RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 SLC44A3Q8N4M1 653 aa16.2■□□□□ 0.18
SDC3-203ENST00000471567 STKLD1Q8NE28 680 aa16.2■□□□□ 0.18
SDC3-203ENST00000471567 ZMIZ2Q8NF64 920 aa16.2■□□□□ 0.18
SDC3-203ENST00000471567 SMARCD2Q92925 531 aa16.2■□□□□ 0.18
SDC3-203ENST00000471567 KAT5Q92993 513 aa16.2■□□□□ 0.18
SDC3-203ENST00000471567 KREMEN1Q96MU8 473 aa16.2■□□□□ 0.18
SDC3-203ENST00000471567 ASB16Q96NS5 453 aa16.2■□□□□ 0.18
SDC3-203ENST00000471567 KCNK16Q96T55 309 aa16.2■□□□□ 0.18
SDC3-203ENST00000471567 SMOQ99835 787 aa16.2■□□□□ 0.18
SDC3-203ENST00000471567 TASP1Q9H6P5 420 aa16.2■□□□□ 0.18
SDC3-203ENST00000471567 TRPV4Q9HBA0 871 aa16.2■□□□□ 0.18
SDC3-203ENST00000471567 PNPLA8Q9NP80 782 aa16.2■□□□□ 0.18
SDC3-203ENST00000471567 UBE2TQ9NPD8 197 aaPredicted RBP16.2■□□□□ 0.18
SDC3-203ENST00000471567 APEX2Q9UBZ4 518 aa16.2■□□□□ 0.18
SDC3-203ENST00000471567 LIMA1Q9UHB6 759 aaKnown RBP16.2■□□□□ 0.18
SDC3-203ENST00000471567 CNTN6Q9UQ52 1028 aa16.2■□□□□ 0.18
SDC3-203ENST00000471567 NUMBLQ9Y6R0 609 aa16.2■□□□□ 0.18
SDC3-203ENST00000471567 LRRC10BA6NIK2 292 aa16.19■□□□□ 0.18
SDC3-203ENST00000471567 PES1O00541 588 aaKnown RBP16.19■□□□□ 0.18
SDC3-203ENST00000471567 TNFRSF10BO14763 440 aa16.19■□□□□ 0.18
SDC3-203ENST00000471567 VDRP11473 427 aa16.19■□□□□ 0.18
SDC3-203ENST00000471567 ZNF18P17022 549 aa16.19■□□□□ 0.18
SDC3-203ENST00000471567 ZNF165P49910 485 aa16.19■□□□□ 0.18
SDC3-203ENST00000471567 SGO2Q562F6 1265 aa16.19■□□□□ 0.18
SDC3-203ENST00000471567 FAM78AQ5JUQ0 283 aa16.19■□□□□ 0.18
SDC3-203ENST00000471567 GPR158Q5T848 1215 aa16.19■□□□□ 0.18
SDC3-203ENST00000471567 CLEC20AQ6ZU45 233 aa16.19■□□□□ 0.18
SDC3-203ENST00000471567 AOPEPQ8N6M6 819 aa16.19■□□□□ 0.18
SDC3-203ENST00000471567 ZSCAN18Q8TBC5 510 aaPredicted RBP16.19■□□□□ 0.18
SDC3-203ENST00000471567 RSAD2Q8WXG1 361 aa16.19■□□□□ 0.18
SDC3-203ENST00000471567 MRPS31Q92665 395 aaKnown RBP16.19■□□□□ 0.18
SDC3-203ENST00000471567 EDAQ92838 391 aa16.19■□□□□ 0.18
SDC3-203ENST00000471567 FGF14Q92915 247 aa16.19■□□□□ 0.18
SDC3-203ENST00000471567 E2F7Q96AV8 911 aa16.19■□□□□ 0.18
SDC3-203ENST00000471567 ELSPBP1Q96BH3 223 aa16.19■□□□□ 0.18
SDC3-203ENST00000471567 ZSWIM3Q96MP5 696 aa16.19■□□□□ 0.18
SDC3-203ENST00000471567 DUSP16Q9BY84 665 aa16.19■□□□□ 0.18
SDC3-203ENST00000471567 SLITRK6Q9H5Y7 841 aa16.19■□□□□ 0.18
SDC3-203ENST00000471567 ZFP14Q9HCL3 533 aa16.19■□□□□ 0.18
SDC3-203ENST00000471567 TAB2Q9NYJ8 693 aa16.19■□□□□ 0.18
SDC3-203ENST00000471567 IL37Q9NZH6 218 aa16.19■□□□□ 0.18
SDC3-203ENST00000471567 BEST1O76090 585 aa16.18■□□□□ 0.18
SDC3-203ENST00000471567 CAVIN2O95810 425 aa16.18■□□□□ 0.18
SDC3-203ENST00000471567 NPR3P17342 541 aa16.18■□□□□ 0.18
SDC3-203ENST00000471567 CDK11BP21127 795 aaKnown RBP16.18■□□□□ 0.18
SDC3-203ENST00000471567 YWHAQP27348 245 aa16.18■□□□□ 0.18
SDC3-203ENST00000471567 MAP3K7CLP57077 242 aa16.18■□□□□ 0.18
SDC3-203ENST00000471567 USP46P62068 366 aa16.18■□□□□ 0.18
SDC3-203ENST00000471567 CYP4F8P98187 520 aa16.18■□□□□ 0.18
SDC3-203ENST00000471567 MON1AQ86VX9 555 aa16.18■□□□□ 0.18
SDC3-203ENST00000471567 ANKRD52Q8NB46 1076 aa16.18■□□□□ 0.18
SDC3-203ENST00000471567 RBBP8NLQ8NC74 664 aaPredicted RBP16.18■□□□□ 0.18
SDC3-203ENST00000471567 OVCA2Q8WZ82 227 aa16.18■□□□□ 0.18
SDC3-203ENST00000471567 SLITRK1Q96PX8 696 aa16.18■□□□□ 0.18
SDC3-203ENST00000471567 UBXN6Q9BZV1 441 aa16.18■□□□□ 0.18
SDC3-203ENST00000471567 VPS16Q9H269 839 aa16.18■□□□□ 0.18
SDC3-203ENST00000471567 HSD3B7Q9H2F3 369 aa16.18■□□□□ 0.18
SDC3-203ENST00000471567 EPHX3Q9H6B9 360 aa16.18■□□□□ 0.18
SDC3-203ENST00000471567 SIX2Q9NPC8 291 aa16.18■□□□□ 0.18
SDC3-203ENST00000471567 TRPM5Q9NZQ8 1165 aa16.18■□□□□ 0.18
SDC3-203ENST00000471567 FAM92AA1XBS5 289 aa16.17■□□□□ 0.18
SDC3-203ENST00000471567 RNF225M0QZC1 329 aaPredicted RBP16.17■□□□□ 0.18
SDC3-203ENST00000471567 TADA3O75528 432 aa16.17■□□□□ 0.18
SDC3-203ENST00000471567 CD19P15391 556 aa16.17■□□□□ 0.18
SDC3-203ENST00000471567 PFKLP17858 780 aa16.17■□□□□ 0.18
SDC3-203ENST00000471567 FCARP24071 287 aa16.17■□□□□ 0.18
SDC3-203ENST00000471567 ZNF132P52740 706 aa16.17■□□□□ 0.18
SDC3-203ENST00000471567 COPB1P53618 953 aaKnown RBP16.17■□□□□ 0.18
SDC3-203ENST00000471567 SLC5A3P53794 718 aa16.17■□□□□ 0.18
SDC3-203ENST00000471567 SLC8A3P57103 927 aa16.17■□□□□ 0.18
SDC3-203ENST00000471567 KCNMA1Q12791 1236 aa16.17■□□□□ 0.18
SDC3-203ENST00000471567 STILQ15468 1287 aa16.17■□□□□ 0.18
SDC3-203ENST00000471567 NFKBIBQ15653 356 aa16.17■□□□□ 0.18
SDC3-203ENST00000471567 ZSCAN23Q3MJ62 389 aa16.17■□□□□ 0.18
SDC3-203ENST00000471567 FKBP15Q5T1M5 1219 aa16.17■□□□□ 0.18
SDC3-203ENST00000471567 STXBP5Q5T5C0 1151 aa16.17■□□□□ 0.18
SDC3-203ENST00000471567 TANGO2Q6ICL3 276 aa16.17■□□□□ 0.18
SDC3-203ENST00000471567 ARID3BQ8IVW6 561 aaPredicted RBP16.17■□□□□ 0.18
SDC3-203ENST00000471567 DHX40Q8IX18 779 aaKnown RBP16.17■□□□□ 0.18
SDC3-203ENST00000471567 PDZD8Q8NEN9 1154 aa16.17■□□□□ 0.18
SDC3-203ENST00000471567 SLC46A2Q9BY10 475 aa16.17■□□□□ 0.18
SDC3-203ENST00000471567 FBXO44Q9H4M3 255 aa16.17■□□□□ 0.18
SDC3-203ENST00000471567 OBP2AQ9NY56 170 aa16.17■□□□□ 0.18
SDC3-203ENST00000471567 DUSP12Q9UNI6 340 aa16.17■□□□□ 0.18
SDC3-203ENST00000471567 GREB1Q4ZG55 1949 aa16.17■□□□□ 0.18
SDC3-203ENST00000471567 NCANO14594 1321 aa16.17■□□□□ 0.18
SDC3-203ENST00000471567 BECN2A8MW95 431 aa16.16■□□□□ 0.18
SDC3-203ENST00000471567 HHLA1C9JL84 531 aa16.16■□□□□ 0.18
SDC3-203ENST00000471567 O00370 1275 aa16.16■□□□□ 0.18
SDC3-203ENST00000471567 SRFP11831 508 aa16.16■□□□□ 0.18
SDC3-203ENST00000471567 RFX1P22670 979 aa16.16■□□□□ 0.18
SDC3-203ENST00000471567 BCAT1P54687 386 aa16.16■□□□□ 0.18
SDC3-203ENST00000471567 SIGLEC14Q08ET2 396 aa16.16■□□□□ 0.18
SDC3-203ENST00000471567 TAF10Q12962 218 aa16.16■□□□□ 0.18
SDC3-203ENST00000471567 IQCB1Q15051 598 aa16.16■□□□□ 0.18
SDC3-203ENST00000471567 CNGA2Q16280 664 aa16.16■□□□□ 0.18
SDC3-203ENST00000471567 TXNDC8Q6A555 127 aa16.16■□□□□ 0.18
SDC3-203ENST00000471567 DPY19L2P1Q6NXN4 242 aa16.16■□□□□ 0.18
SDC3-203ENST00000471567 GJB7Q6PEY0 223 aa16.16■□□□□ 0.18
SDC3-203ENST00000471567 LCLAT1Q6UWP7 414 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms