RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 TRAV19A0A0A6YYK7 116 aa16.36■□□□□ 0.21
COL1A1-203ENST00000471344 A0A1W2PQ27 194 aa16.36■□□□□ 0.21
COL1A1-203ENST00000471344 A0A1W2PQ64 194 aa16.36■□□□□ 0.21
COL1A1-203ENST00000471344 A0A1W2PQD8 194 aa16.36■□□□□ 0.21
COL1A1-203ENST00000471344 RHOBTB3O94955 611 aa16.36■□□□□ 0.21
COL1A1-203ENST00000471344 TRIM49P0CI25 452 aa16.36■□□□□ 0.21
COL1A1-203ENST00000471344 TRIM49CP0CI26 452 aa16.36■□□□□ 0.21
COL1A1-203ENST00000471344 FAM160A1Q05DH4 1040 aa16.36■□□□□ 0.21
COL1A1-203ENST00000471344 IFRD2Q12894 506 aaPredicted RBP16.36■□□□□ 0.21
COL1A1-203ENST00000471344 LRRC32Q14392 662 aa16.36■□□□□ 0.21
COL1A1-203ENST00000471344 ZNF268Q14587 947 aaPredicted RBP16.36■□□□□ 0.21
COL1A1-203ENST00000471344 MTF1Q14872 753 aa16.36■□□□□ 0.21
COL1A1-203ENST00000471344 MAPRE1Q15691 268 aaKnown RBP16.36■□□□□ 0.21
COL1A1-203ENST00000471344 FSTL4Q6MZW2 842 aa16.36■□□□□ 0.21
COL1A1-203ENST00000471344 DENND5BQ6ZUT9 1274 aa16.36■□□□□ 0.21
COL1A1-203ENST00000471344 SMYD4Q8IYR2 804 aaPredicted RBP16.36■□□□□ 0.21
COL1A1-203ENST00000471344 KIAA2013Q8IYS2 634 aa16.36■□□□□ 0.21
COL1A1-203ENST00000471344 TMEM174Q8WUU8 243 aa16.36■□□□□ 0.21
COL1A1-203ENST00000471344 ATRIPQ8WXE1 791 aa16.36■□□□□ 0.21
COL1A1-203ENST00000471344 HINFPQ9BQA5 517 aa16.36■□□□□ 0.21
COL1A1-203ENST00000471344 TTLL2Q9BWV7 592 aa16.36■□□□□ 0.21
COL1A1-203ENST00000471344 SCAND2PQ9GZW5 306 aaPredicted RBP16.36■□□□□ 0.21
COL1A1-203ENST00000471344 VRTNQ9H8Y1 702 aa16.36■□□□□ 0.21
COL1A1-203ENST00000471344 FBRSL1Q9HCM7 1045 aaKnown RBP16.36■□□□□ 0.21
COL1A1-203ENST00000471344 POLR3BQ9NW08 1133 aaPredicted RBP16.36■□□□□ 0.21
COL1A1-203ENST00000471344 ZMYM5Q9UJ78 669 aa16.36■□□□□ 0.21
COL1A1-203ENST00000471344 SCAMP3O14828 347 aaKnown RBP16.35■□□□□ 0.21
COL1A1-203ENST00000471344 TRIM66O15016 1216 aa16.35■□□□□ 0.21
COL1A1-203ENST00000471344 AKAP3O75969 853 aa16.35■□□□□ 0.21
COL1A1-203ENST00000471344 ZNF202O95125 648 aa16.35■□□□□ 0.21
COL1A1-203ENST00000471344 MYL1P05976 194 aa16.35■□□□□ 0.21
COL1A1-203ENST00000471344 USP17L7P0C7H9 530 aa16.35■□□□□ 0.21
COL1A1-203ENST00000471344 ANXA13P27216 316 aa16.35■□□□□ 0.21
COL1A1-203ENST00000471344 CCR3P51677 355 aa16.35■□□□□ 0.21
COL1A1-203ENST00000471344 SRSF5Q13243 272 aaKnown RBP16.35■□□□□ 0.21
COL1A1-203ENST00000471344 ZACNQ401N2 412 aa16.35■□□□□ 0.21
COL1A1-203ENST00000471344 ZNF667Q5HYK9 610 aa16.35■□□□□ 0.21
COL1A1-203ENST00000471344 PAQR9Q6ZVX9 377 aa16.35■□□□□ 0.21
COL1A1-203ENST00000471344 SV2AQ7L0J3 742 aa16.35■□□□□ 0.21
COL1A1-203ENST00000471344 SH3RF2Q8TEC5 729 aa16.35■□□□□ 0.21
COL1A1-203ENST00000471344 C8orf48Q96LL4 319 aa16.35■□□□□ 0.21
COL1A1-203ENST00000471344 SMG5Q9UPR3 1016 aaKnown RBP16.35■□□□□ 0.21
COL1A1-203ENST00000471344 TRAF3IP3Q9Y228 551 aa16.35■□□□□ 0.21
COL1A1-203ENST00000471344 MYO16Q9Y6X6 1858 aa16.34■□□□□ 0.21
COL1A1-203ENST00000471344 SOBPA7XYQ1 873 aa16.34■□□□□ 0.21
COL1A1-203ENST00000471344 CHURC1-FNTBB4DL54 471 aa16.34■□□□□ 0.21
COL1A1-203ENST00000471344 K7ESF4 209 aa16.34■□□□□ 0.21
COL1A1-203ENST00000471344 HLA-DRAP01903 254 aa16.34■□□□□ 0.21
COL1A1-203ENST00000471344 CCDC130P13994 396 aa16.34■□□□□ 0.21
COL1A1-203ENST00000471344 NR2F2P24468 414 aa16.34■□□□□ 0.21
COL1A1-203ENST00000471344 CXCL12P48061 93 aa16.34■□□□□ 0.21
COL1A1-203ENST00000471344 FNTBP49356 437 aa16.34■□□□□ 0.21
COL1A1-203ENST00000471344 NOP14P78316 857 aaKnown RBP16.34■□□□□ 0.21
COL1A1-203ENST00000471344 PNOCQ13519 176 aa16.34■□□□□ 0.21
COL1A1-203ENST00000471344 KCNB1Q14721 858 aa16.34■□□□□ 0.21
COL1A1-203ENST00000471344 LPAL2Q16609 132 aa16.34■□□□□ 0.21
COL1A1-203ENST00000471344 TMEM196Q5HYL7 178 aa16.34■□□□□ 0.21
COL1A1-203ENST00000471344 HEATR6Q6AI08 1181 aaKnown RBP16.34■□□□□ 0.21
COL1A1-203ENST00000471344 CC2D1AQ6P1N0 951 aaPredicted RBP16.34■□□□□ 0.21
COL1A1-203ENST00000471344 MAMSTRQ6ZN01 415 aa16.34■□□□□ 0.21
COL1A1-203ENST00000471344 ACOT1Q86TX2 421 aa16.34■□□□□ 0.21
COL1A1-203ENST00000471344 FAM35AQ86V20 835 aa16.34■□□□□ 0.21
COL1A1-203ENST00000471344 SPEM1Q8N4L4 309 aa16.34■□□□□ 0.21
COL1A1-203ENST00000471344 TMC2Q8TDI7 906 aa16.34■□□□□ 0.21
COL1A1-203ENST00000471344 RUBCNQ92622 972 aa16.34■□□□□ 0.21
COL1A1-203ENST00000471344 EEF2KMTQ96G04 330 aa16.34■□□□□ 0.21
COL1A1-203ENST00000471344 KCNK16Q96T55 309 aa16.34■□□□□ 0.21
COL1A1-203ENST00000471344 IER2Q9BTL4 223 aa16.34■□□□□ 0.21
COL1A1-203ENST00000471344 ELOVL4Q9GZR5 314 aa16.34■□□□□ 0.21
COL1A1-203ENST00000471344 RNF38Q9H0F5 515 aa16.34■□□□□ 0.21
COL1A1-203ENST00000471344 EPC1Q9H2F5 836 aa16.34■□□□□ 0.21
COL1A1-203ENST00000471344 LINC00597Q9H2U6 94 aa16.34■□□□□ 0.21
COL1A1-203ENST00000471344 DUS2Q9NX74 493 aaKnown RBP16.34■□□□□ 0.21
COL1A1-203ENST00000471344 KIAA1549LQ6ZVL6 1849 aa16.33■□□□□ 0.21
COL1A1-203ENST00000471344 ATG2BQ96BY7 2078 aa16.33■□□□□ 0.21
COL1A1-203ENST00000471344 ZNF840PA6NDX5 716 aa16.33■□□□□ 0.2
COL1A1-203ENST00000471344 CALUO43852 315 aaPredicted RBP16.33■□□□□ 0.2
COL1A1-203ENST00000471344 ABL1P00519 1130 aa16.33■□□□□ 0.2
COL1A1-203ENST00000471344 EGFP01133 1207 aa16.33■□□□□ 0.2
COL1A1-203ENST00000471344 FAM163BP0C2L3 166 aa16.33■□□□□ 0.2
COL1A1-203ENST00000471344 HDCP19113 662 aa16.33■□□□□ 0.2
COL1A1-203ENST00000471344 GJA4P35212 333 aa16.33■□□□□ 0.2
COL1A1-203ENST00000471344 PIK3CAP42336 1068 aa16.33■□□□□ 0.2
COL1A1-203ENST00000471344 ASPAP45381 313 aa16.33■□□□□ 0.2
COL1A1-203ENST00000471344 GCLMP48507 274 aa16.33■□□□□ 0.2
COL1A1-203ENST00000471344 AP3M2P53677 418 aa16.33■□□□□ 0.2
COL1A1-203ENST00000471344 PPP3CAQ08209 521 aa16.33■□□□□ 0.2
COL1A1-203ENST00000471344 TAF10Q12962 218 aa16.33■□□□□ 0.2
COL1A1-203ENST00000471344 EML3Q32P44 896 aa16.33■□□□□ 0.2
COL1A1-203ENST00000471344 ZCWPW2Q504Y3 356 aa16.33■□□□□ 0.2
COL1A1-203ENST00000471344 DGKKQ5KSL6 1271 aa16.33■□□□□ 0.2
COL1A1-203ENST00000471344 C1orf228Q6PIY5 440 aa16.33■□□□□ 0.2
COL1A1-203ENST00000471344 FUKQ8N0W3 1084 aa16.33■□□□□ 0.2
COL1A1-203ENST00000471344 SCAMP5Q8TAC9 235 aa16.33■□□□□ 0.2
COL1A1-203ENST00000471344 OSCP1Q8WVF1 389 aa16.33■□□□□ 0.2
COL1A1-203ENST00000471344 EZH1Q92800 747 aaPredicted RBP16.33■□□□□ 0.2
COL1A1-203ENST00000471344 ERCC4Q92889 916 aaPredicted RBP16.33■□□□□ 0.2
COL1A1-203ENST00000471344 MMRN2Q9H8L6 949 aa16.33■□□□□ 0.2
COL1A1-203ENST00000471344 ECT2Q9H8V3 914 aa16.33■□□□□ 0.2
COL1A1-203ENST00000471344 APOBEC3GQ9HC16 384 aaKnown RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms