RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 RAB34Q9BZG1 259 aa6.37□□□□□ -1.39
VARS-222ENST00000470953 DPH1Q9BZG8 443 aa6.37□□□□□ -1.39
VARS-222ENST00000470953 FOXP1Q9H334 677 aaPredicted RBP6.37□□□□□ -1.39
VARS-222ENST00000470953 XPNPEP1Q9NQW7 623 aa6.37□□□□□ -1.39
VARS-222ENST00000470953 THG1LQ9NWX6 298 aaKnown RBP6.37□□□□□ -1.39
VARS-222ENST00000470953 AFF4Q9UHB7 1163 aaKnown RBP6.37□□□□□ -1.39
VARS-222ENST00000470953 ITGB1BP2Q9UKP3 347 aa6.37□□□□□ -1.39
VARS-222ENST00000470953 VAV3Q9UKW4 847 aa6.37□□□□□ -1.39
VARS-222ENST00000470953 MMP17Q9ULZ9 603 aa6.37□□□□□ -1.39
VARS-222ENST00000470953 SMC3Q9UQE7 1217 aa6.37□□□□□ -1.39
VARS-222ENST00000470953 SLC27A5Q9Y2P5 690 aa6.37□□□□□ -1.39
VARS-222ENST00000470953 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.37□□□□□ -1.39
VARS-222ENST00000470953 CCDC168Q8NDH2 2452 aa6.37□□□□□ -1.39
VARS-222ENST00000470953 SEMA7AO75326 666 aa6.36□□□□□ -1.39
VARS-222ENST00000470953 P4HBP07237 508 aaKnown RBP6.36□□□□□ -1.39
VARS-222ENST00000470953 HSP90AA1P07900 732 aaKnown RBP6.36□□□□□ -1.39
VARS-222ENST00000470953 WEE1P30291 646 aa6.36□□□□□ -1.39
VARS-222ENST00000470953 YWHABP31946 246 aaKnown RBP6.36□□□□□ -1.39
VARS-222ENST00000470953 RFC5P40937 340 aa6.36□□□□□ -1.39
VARS-222ENST00000470953 CASRP41180 1078 aa6.36□□□□□ -1.39
VARS-222ENST00000470953 UQCRFS1P47985 274 aa6.36□□□□□ -1.39
VARS-222ENST00000470953 ST3GAL1Q11201 340 aa6.36□□□□□ -1.39
VARS-222ENST00000470953 DUSP4Q13115 394 aa6.36□□□□□ -1.39
VARS-222ENST00000470953 CTTNQ14247 550 aaKnown RBP6.36□□□□□ -1.39
VARS-222ENST00000470953 EMC2Q15006 297 aa6.36□□□□□ -1.39
VARS-222ENST00000470953 TMEM132AQ24JP5 1023 aa6.36□□□□□ -1.39
VARS-222ENST00000470953 GLIPR1L2Q4G1C9 344 aa6.36□□□□□ -1.39
VARS-222ENST00000470953 XKR9Q5GH70 373 aa6.36□□□□□ -1.39
VARS-222ENST00000470953 EARS2Q5JPH6 523 aaKnown RBP6.36□□□□□ -1.39
VARS-222ENST00000470953 EMC10Q5UCC4 262 aa6.36□□□□□ -1.39
VARS-222ENST00000470953 FBXL19Q6PCT2 694 aa6.36□□□□□ -1.39
VARS-222ENST00000470953 XKR5Q6UX68 686 aa6.36□□□□□ -1.39
VARS-222ENST00000470953 TMEM150AQ86TG1 271 aa6.36□□□□□ -1.39
VARS-222ENST00000470953 IFNLR1Q8IU57 520 aaPredicted RBP6.36□□□□□ -1.39
VARS-222ENST00000470953 RGL4Q8IZJ4 473 aa6.36□□□□□ -1.39
VARS-222ENST00000470953 ALLCQ8N6M5 410 aa6.36□□□□□ -1.39
VARS-222ENST00000470953 TRIML1Q8N9V2 468 aa6.36□□□□□ -1.39
VARS-222ENST00000470953 TXNDC5Q8NBS9 432 aaKnown RBP6.36□□□□□ -1.39
VARS-222ENST00000470953 BEST2Q8NFU1 509 aa6.36□□□□□ -1.39
VARS-222ENST00000470953 MIB2Q96AX9 1013 aa6.36□□□□□ -1.39
VARS-222ENST00000470953 DYDC2Q96IM9 177 aa6.36□□□□□ -1.39
VARS-222ENST00000470953 HSPA12BQ96MM6 686 aa6.36□□□□□ -1.39
VARS-222ENST00000470953 TBC1D32Q96NH3 1257 aa6.36□□□□□ -1.39
VARS-222ENST00000470953 ZDHHC5Q9C0B5 715 aa6.36□□□□□ -1.39
VARS-222ENST00000470953 SLC25A18Q9H1K4 315 aa6.36□□□□□ -1.39
VARS-222ENST00000470953 TASP1Q9H6P5 420 aa6.36□□□□□ -1.39
VARS-222ENST00000470953 ZSWIM4Q9H7M6 989 aa6.36□□□□□ -1.39
VARS-222ENST00000470953 TTC12Q9H892 705 aaPredicted RBP6.36□□□□□ -1.39
VARS-222ENST00000470953 ECT2Q9H8V3 914 aa6.36□□□□□ -1.39
VARS-222ENST00000470953 IL21Q9HBE4 155 aa6.36□□□□□ -1.39
VARS-222ENST00000470953 KCNMB3Q9NPA1 279 aa6.36□□□□□ -1.39
VARS-222ENST00000470953 CD93Q9NPY3 652 aa6.36□□□□□ -1.39
VARS-222ENST00000470953 PCDHA12Q9UN75 941 aa6.36□□□□□ -1.39
VARS-222ENST00000470953 GDAQ9Y2T3 454 aa6.36□□□□□ -1.39
VARS-222ENST00000470953 PPME1Q9Y570 386 aa6.36□□□□□ -1.39
VARS-222ENST00000470953 PCDHGB2Q9Y5G2 931 aa6.36□□□□□ -1.39
VARS-222ENST00000470953 SDK2Q58EX2 2172 aa6.35□□□□□ -1.39
VARS-222ENST00000470953 CBX4O00257 560 aa6.35□□□□□ -1.39
VARS-222ENST00000470953 ASAP2O43150 1006 aa6.35□□□□□ -1.39
VARS-222ENST00000470953 WIPF1O43516 503 aa6.35□□□□□ -1.39
VARS-222ENST00000470953 TRAPPC3O43617 180 aa6.35□□□□□ -1.39
VARS-222ENST00000470953 USO1O60763 962 aaKnown RBP6.35□□□□□ -1.39
VARS-222ENST00000470953 ADAM23O75077 832 aa6.35□□□□□ -1.39
VARS-222ENST00000470953 KLF8O95600 359 aaPredicted RBP6.35□□□□□ -1.39
VARS-222ENST00000470953 CER1O95813 267 aa6.35□□□□□ -1.39
VARS-222ENST00000470953 EDN1P05305 212 aa6.35□□□□□ -1.39
VARS-222ENST00000470953 CPB1P15086 417 aa6.35□□□□□ -1.39
VARS-222ENST00000470953 GLRA2P23416 452 aa6.35□□□□□ -1.39
VARS-222ENST00000470953 GJB2P29033 226 aa6.35□□□□□ -1.39
VARS-222ENST00000470953 NMT1P30419 496 aaKnown RBP6.35□□□□□ -1.39
VARS-222ENST00000470953 OPRD1P41143 372 aa6.35□□□□□ -1.39
VARS-222ENST00000470953 MATKP42679 507 aa6.35□□□□□ -1.39
VARS-222ENST00000470953 TRAPPC10P48553 1259 aa6.35□□□□□ -1.39
VARS-222ENST00000470953 NCBP1Q09161 790 aaKnown RBP6.35□□□□□ -1.39
VARS-222ENST00000470953 DNAJC3Q13217 504 aa6.35□□□□□ -1.39
VARS-222ENST00000470953 ORC2Q13416 577 aaPredicted RBP6.35□□□□□ -1.39
VARS-222ENST00000470953 TFDP1Q14186 410 aa6.35□□□□□ -1.39
VARS-222ENST00000470953 PCBP1Q15365 356 aaKnown RBP eCLIP6.35□□□□□ -1.39
VARS-222ENST00000470953 EPHA7Q15375 998 aa6.35□□□□□ -1.39
VARS-222ENST00000470953 ZNF174Q15697 407 aa6.35□□□□□ -1.39
VARS-222ENST00000470953 GAB4Q2WGN9 574 aa6.35□□□□□ -1.39
VARS-222ENST00000470953 HLA-BQ31612 363 aa6.35□□□□□ -1.39
VARS-222ENST00000470953 ARL13BQ3SXY8 428 aa6.35□□□□□ -1.39
VARS-222ENST00000470953 FHL5Q5TD97 284 aa6.35□□□□□ -1.39
VARS-222ENST00000470953 EEF1DP3Q658K8 133 aa6.35□□□□□ -1.39
VARS-222ENST00000470953 CMTM8Q8IZV2 173 aa6.35□□□□□ -1.39
VARS-222ENST00000470953 PGBD3Q8N328 593 aa6.35□□□□□ -1.39
VARS-222ENST00000470953 IL17RCQ8NAC3 791 aa6.35□□□□□ -1.39
VARS-222ENST00000470953 ATAD1Q8NBU5 361 aa6.35□□□□□ -1.39
VARS-222ENST00000470953 FBXO18Q8NFZ0 1043 aa6.35□□□□□ -1.39
VARS-222ENST00000470953 RASSF8Q8NHQ8 419 aa6.35□□□□□ -1.39
VARS-222ENST00000470953 ZNF564Q8TBZ8 553 aaPredicted RBP6.35□□□□□ -1.39
VARS-222ENST00000470953 TCP11Q8WWU5 503 aa6.35□□□□□ -1.39
VARS-222ENST00000470953 HAS1Q92839 578 aa6.35□□□□□ -1.39
VARS-222ENST00000470953 TNFRSF25Q93038 417 aa6.35□□□□□ -1.39
VARS-222ENST00000470953 PSMG2Q969U7 264 aa6.35□□□□□ -1.39
VARS-222ENST00000470953 ERLEC1Q96DZ1 483 aa6.35□□□□□ -1.39
VARS-222ENST00000470953 TMX3Q96JJ7 454 aa6.35□□□□□ -1.39
VARS-222ENST00000470953 ZFRQ96KR1 1074 aaKnown RBP6.35□□□□□ -1.39
VARS-222ENST00000470953 MTRQ99707 1265 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms