RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 SIM1P81133 766 aaPredicted RBP5.09□□□□□ -1.59
COL9A1-206ENST00000470652 TSHZ1Q6ZSZ6 1077 aa5.09□□□□□ -1.59
COL9A1-206ENST00000470652 MAGEB6Q8N7X4 407 aa5.09□□□□□ -1.59
COL9A1-206ENST00000470652 ZBTB34Q8NCN2 500 aa5.09□□□□□ -1.59
COL9A1-206ENST00000470652 SIMC1Q8NDZ2 872 aa5.09□□□□□ -1.59
COL9A1-206ENST00000470652 FAM46DQ8NEK8 389 aa5.09□□□□□ -1.59
COL9A1-206ENST00000470652 PPP1R35Q8TAP8 253 aa5.09□□□□□ -1.59
COL9A1-206ENST00000470652 MYCBPAPQ8TBZ2 947 aa5.09□□□□□ -1.59
COL9A1-206ENST00000470652 MOGAT1Q96PD6 335 aa5.09□□□□□ -1.59
COL9A1-206ENST00000470652 NELL2Q99435 816 aa5.09□□□□□ -1.59
COL9A1-206ENST00000470652 DUSP26Q9BV47 211 aa5.09□□□□□ -1.59
COL9A1-206ENST00000470652 TPSD1Q9BZJ3 242 aa5.09□□□□□ -1.59
COL9A1-206ENST00000470652 FOXJ2Q9P0K8 574 aa5.09□□□□□ -1.59
COL9A1-206ENST00000470652 TLK1Q9UKI8 766 aa5.09□□□□□ -1.59
COL9A1-206ENST00000470652 G3BP2Q9UN86 482 aaKnown RBP5.09□□□□□ -1.59
COL9A1-206ENST00000470652 MED16Q9Y2X0 877 aa5.09□□□□□ -1.59
COL9A1-206ENST00000470652 NALCNQ8IZF0 1738 aa5.09□□□□□ -1.6
COL9A1-206ENST00000470652 PLEKHG1Q9ULL1 1385 aa5.08□□□□□ -1.6
COL9A1-206ENST00000470652 ZNF335Q9H4Z2 1342 aaPredicted RBP5.08□□□□□ -1.6
COL9A1-206ENST00000470652 CLSPNQ9HAW4 1339 aa5.08□□□□□ -1.6
COL9A1-206ENST00000470652 A0A1W2PPL8 197 aa5.08□□□□□ -1.6
COL9A1-206ENST00000470652 TUSC2O75896 110 aa5.08□□□□□ -1.6
COL9A1-206ENST00000470652 DNAJB5O75953 348 aa5.08□□□□□ -1.6
COL9A1-206ENST00000470652 CHRM3P20309 590 aa5.08□□□□□ -1.6
COL9A1-206ENST00000470652 CLK3P49761 638 aaKnown RBP5.08□□□□□ -1.6
COL9A1-206ENST00000470652 IQCB1Q15051 598 aa5.08□□□□□ -1.6
COL9A1-206ENST00000470652 LONRF3Q496Y0 759 aa5.08□□□□□ -1.6
COL9A1-206ENST00000470652 RBM20Q5T481 1227 aaKnown RBP5.08□□□□□ -1.6
COL9A1-206ENST00000470652 SFRP4Q6FHJ7 346 aaPredicted RBP5.08□□□□□ -1.6
COL9A1-206ENST00000470652 NPNTQ6UXI9 565 aa5.08□□□□□ -1.6
COL9A1-206ENST00000470652 FBXO41Q8TF61 875 aa5.08□□□□□ -1.6
COL9A1-206ENST00000470652 RUNDC1Q96C34 613 aa5.08□□□□□ -1.6
COL9A1-206ENST00000470652 MRGPRX1Q96LB2 322 aa5.08□□□□□ -1.6
COL9A1-206ENST00000470652 AMBRA1Q9C0C7 1298 aa5.08□□□□□ -1.6
COL9A1-206ENST00000470652 TMEM60Q9H2L4 133 aa5.08□□□□□ -1.6
COL9A1-206ENST00000470652 ALG13Q9NP73 1137 aaKnown RBP5.08□□□□□ -1.6
COL9A1-206ENST00000470652 C1orf112Q9NSG2 853 aa5.08□□□□□ -1.6
COL9A1-206ENST00000470652 KLC4Q9NSK0 619 aa5.08□□□□□ -1.6
COL9A1-206ENST00000470652 STAP2Q9UGK3 403 aa5.08□□□□□ -1.6
COL9A1-206ENST00000470652 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.08□□□□□ -1.6
COL9A1-206ENST00000470652 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.08□□□□□ -1.6
COL9A1-206ENST00000470652 KNDC1Q76NI1 1749 aa5.08□□□□□ -1.6
COL9A1-206ENST00000470652 LAMC1P11047 1609 aa5.08□□□□□ -1.6
COL9A1-206ENST00000470652 ROCK2O75116 1388 aaKnown RBP5.07□□□□□ -1.6
COL9A1-206ENST00000470652 GOLGA6CA6NDK9 693 aa5.07□□□□□ -1.6
COL9A1-206ENST00000470652 GOLGA6BA6NDN3 693 aa5.07□□□□□ -1.6
COL9A1-206ENST00000470652 PRPF3O43395 683 aaKnown RBP5.07□□□□□ -1.6
COL9A1-206ENST00000470652 TSPAN6O43657 245 aa5.07□□□□□ -1.6
COL9A1-206ENST00000470652 MARCH6O60337 910 aa5.07□□□□□ -1.6
COL9A1-206ENST00000470652 UNC5CO95185 931 aa5.07□□□□□ -1.6
COL9A1-206ENST00000470652 GRPP07492 148 aa5.07□□□□□ -1.6
COL9A1-206ENST00000470652 ATXN1LP0C7T5 689 aaKnown RBP5.07□□□□□ -1.6
COL9A1-206ENST00000470652 GOLGA6DP0CG33 693 aa5.07□□□□□ -1.6
COL9A1-206ENST00000470652 CD6P30203 668 aa5.07□□□□□ -1.6
COL9A1-206ENST00000470652 GRIA3P42263 894 aa5.07□□□□□ -1.6
COL9A1-206ENST00000470652 CACNA2D1P54289 1103 aa5.07□□□□□ -1.6
COL9A1-206ENST00000470652 MLC1Q15049 377 aa5.07□□□□□ -1.6
COL9A1-206ENST00000470652 LAYNQ6UX15 382 aa5.07□□□□□ -1.6
COL9A1-206ENST00000470652 OVCH2Q7RTZ1 564 aa5.07□□□□□ -1.6
COL9A1-206ENST00000470652 MYO1HQ8N1T3 1032 aa5.07□□□□□ -1.6
COL9A1-206ENST00000470652 CELF5Q8N6W0 485 aaKnown RBP5.07□□□□□ -1.6
COL9A1-206ENST00000470652 KBTBD7Q8WVZ9 684 aa5.07□□□□□ -1.6
COL9A1-206ENST00000470652 TFAP2BQ92481 460 aa5.07□□□□□ -1.6
COL9A1-206ENST00000470652 VOPP1Q96AW1 172 aa5.07□□□□□ -1.6
COL9A1-206ENST00000470652 FAM136AQ96C01 138 aa5.07□□□□□ -1.6
COL9A1-206ENST00000470652 SLC46A1Q96NT5 459 aa5.07□□□□□ -1.6
COL9A1-206ENST00000470652 ALG8Q9BVK2 526 aa5.07□□□□□ -1.6
COL9A1-206ENST00000470652 SPATA5L1Q9BVQ7 753 aa5.07□□□□□ -1.6
COL9A1-206ENST00000470652 GOLGA6AQ9NYA3 693 aa5.07□□□□□ -1.6
COL9A1-206ENST00000470652 SLC17A6Q9P2U8 582 aa5.07□□□□□ -1.6
COL9A1-206ENST00000470652 HESX1Q9UBX0 185 aa5.07□□□□□ -1.6
COL9A1-206ENST00000470652 YTHDC2Q9H6S0 1430 aaKnown RBP5.06□□□□□ -1.6
COL9A1-206ENST00000470652 WDR27A2RRH5 827 aa5.06□□□□□ -1.6
COL9A1-206ENST00000470652 CAPN8A6NHC0 703 aa5.06□□□□□ -1.6
COL9A1-206ENST00000470652 FAM227AF5H4B4 570 aa5.06□□□□□ -1.6
COL9A1-206ENST00000470652 MYO1CO00159 1063 aa5.06□□□□□ -1.6
COL9A1-206ENST00000470652 PPM1GO15355 546 aaPredicted RBP5.06□□□□□ -1.6
COL9A1-206ENST00000470652 PHGDHO43175 533 aaKnown RBP5.06□□□□□ -1.6
COL9A1-206ENST00000470652 CHRM2P08172 466 aa5.06□□□□□ -1.6
COL9A1-206ENST00000470652 HSPA5P11021 654 aaKnown RBP5.06□□□□□ -1.6
COL9A1-206ENST00000470652 CYP2C9P11712 490 aa5.06□□□□□ -1.6
COL9A1-206ENST00000470652 XRCC6P12956 609 aaKnown RBP eCLIP5.06□□□□□ -1.6
COL9A1-206ENST00000470652 VIPR2P41587 438 aa5.06□□□□□ -1.6
COL9A1-206ENST00000470652 PXNP49023 591 aaPredicted RBP5.06□□□□□ -1.6
COL9A1-206ENST00000470652 MAPK10P53779 464 aa5.06□□□□□ -1.6
COL9A1-206ENST00000470652 SATB1Q01826 763 aa5.06□□□□□ -1.6
COL9A1-206ENST00000470652 BOP1Q14137 746 aaKnown RBP5.06□□□□□ -1.6
COL9A1-206ENST00000470652 ARHGAP29Q52LW3 1261 aa5.06□□□□□ -1.6
COL9A1-206ENST00000470652 TMEM108Q6UXF1 575 aa5.06□□□□□ -1.6
COL9A1-206ENST00000470652 MAEAQ7L5Y9 396 aa5.06□□□□□ -1.6
COL9A1-206ENST00000470652 GRASPQ7Z6J2 395 aaPredicted RBP5.06□□□□□ -1.6
COL9A1-206ENST00000470652 PRIMA1Q86XR5 153 aa5.06□□□□□ -1.6
COL9A1-206ENST00000470652 FAM109AQ8N4B1 249 aa5.06□□□□□ -1.6
COL9A1-206ENST00000470652 NELL1Q92832 810 aa5.06□□□□□ -1.6
COL9A1-206ENST00000470652 ACTRT3Q9BYD9 372 aa5.06□□□□□ -1.6
COL9A1-206ENST00000470652 B3GNT5Q9BYG0 378 aa5.06□□□□□ -1.6
COL9A1-206ENST00000470652 TTYH3Q9C0H2 523 aa5.06□□□□□ -1.6
COL9A1-206ENST00000470652 FAM204AQ9H8W3 233 aa5.06□□□□□ -1.6
COL9A1-206ENST00000470652 METTL14Q9HCE5 456 aaKnown RBP5.06□□□□□ -1.6
COL9A1-206ENST00000470652 KIAA1586Q9HCI6 787 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms