RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 WHAMMQ8TF30 809 aa9.8□□□□□ -0.84
CCDC171-204ENST00000470191 NOC3LQ8WTT2 800 aaKnown RBP9.8□□□□□ -0.84
CCDC171-204ENST00000470191 FAM84AQ96KN4 292 aa9.8□□□□□ -0.84
CCDC171-204ENST00000470191 REEP2Q9BRK0 252 aa9.8□□□□□ -0.84
CCDC171-204ENST00000470191 POLMQ9NP87 494 aaPredicted RBP9.8□□□□□ -0.84
CCDC171-204ENST00000470191 DDX43Q9NXZ2 648 aaKnown RBP9.8□□□□□ -0.84
CCDC171-204ENST00000470191 KCNG1Q9UIX4 513 aa9.8□□□□□ -0.84
CCDC171-204ENST00000470191 SLC6A14Q9UN76 642 aa9.8□□□□□ -0.84
CCDC171-204ENST00000470191 AGAP1Q9UPQ3 857 aa9.8□□□□□ -0.84
CCDC171-204ENST00000470191 GPSM3Q9Y4H4 160 aa9.8□□□□□ -0.84
CCDC171-204ENST00000470191 PCDHB9Q9Y5E1 797 aa9.8□□□□□ -0.84
CCDC171-204ENST00000470191 VWA3AA6NCI4 1184 aa9.79□□□□□ -0.84
CCDC171-204ENST00000470191 MYMKA6NI61 221 aa9.79□□□□□ -0.84
CCDC171-204ENST00000470191 EIF4E1BA6NMX2 242 aaKnown RBP9.79□□□□□ -0.84
CCDC171-204ENST00000470191 LEFTY2O00292 366 aa9.79□□□□□ -0.84
CCDC171-204ENST00000470191 SH3BP5O60239 455 aa9.79□□□□□ -0.84
CCDC171-204ENST00000470191 HUS1O60921 280 aa9.79□□□□□ -0.84
CCDC171-204ENST00000470191 NOL4O94818 638 aa9.79□□□□□ -0.84
CCDC171-204ENST00000470191 APODP05090 189 aa9.79□□□□□ -0.84
CCDC171-204ENST00000470191 CYP17A1P05093 508 aa9.79□□□□□ -0.84
CCDC171-204ENST00000470191 POLR2BP30876 1174 aaKnown RBP9.79□□□□□ -0.84
CCDC171-204ENST00000470191 TRAPPC10P48553 1259 aa9.79□□□□□ -0.84
CCDC171-204ENST00000470191 ANAPC15P60006 121 aa9.79□□□□□ -0.84
CCDC171-204ENST00000470191 MRPS21P82921 87 aaKnown RBP9.79□□□□□ -0.84
CCDC171-204ENST00000470191 ZXDBP98169 803 aa9.79□□□□□ -0.84
CCDC171-204ENST00000470191 ATP2C1P98194 919 aaPredicted RBP9.79□□□□□ -0.84
CCDC171-204ENST00000470191 TFAMQ00059 246 aaKnown RBP9.79□□□□□ -0.84
CCDC171-204ENST00000470191 RESTQ13127 1097 aa9.79□□□□□ -0.84
CCDC171-204ENST00000470191 NFE2Q16621 373 aaPredicted RBP9.79□□□□□ -0.84
CCDC171-204ENST00000470191 DUOXA1Q1HG43 343 aa9.79□□□□□ -0.84
CCDC171-204ENST00000470191 GAB4Q2WGN9 574 aa9.79□□□□□ -0.84
CCDC171-204ENST00000470191 LMBRD2Q68DH5 695 aaPredicted RBP9.79□□□□□ -0.84
CCDC171-204ENST00000470191 SCARA3Q6AZY7 606 aa9.79□□□□□ -0.84
CCDC171-204ENST00000470191 SLC23A3Q6PIS1 610 aa9.79□□□□□ -0.84
CCDC171-204ENST00000470191 OSTM1Q86WC4 334 aa9.79□□□□□ -0.84
CCDC171-204ENST00000470191 C12orf40Q86WS4 652 aa9.79□□□□□ -0.84
CCDC171-204ENST00000470191 PDCL2Q8N4E4 241 aa9.79□□□□□ -0.84
CCDC171-204ENST00000470191 NAT16Q8N8M0 369 aa9.79□□□□□ -0.84
CCDC171-204ENST00000470191 FBXO18Q8NFZ0 1043 aa9.79□□□□□ -0.84
CCDC171-204ENST00000470191 MDM1Q8TC05 714 aa9.79□□□□□ -0.84
CCDC171-204ENST00000470191 COL26A1Q96A83 441 aa9.79□□□□□ -0.84
CCDC171-204ENST00000470191 TRMT2BQ96GJ1 504 aaKnown RBP9.79□□□□□ -0.84
CCDC171-204ENST00000470191 LRIG1Q96JA1 1093 aa9.79□□□□□ -0.84
CCDC171-204ENST00000470191 ZNF560Q96MR9 790 aa9.79□□□□□ -0.84
CCDC171-204ENST00000470191 HS3ST6Q96QI5 342 aa9.79□□□□□ -0.84
CCDC171-204ENST00000470191 TSPAN18Q96SJ8 248 aa9.79□□□□□ -0.84
CCDC171-204ENST00000470191 PNKPQ96T60 521 aa9.79□□□□□ -0.84
CCDC171-204ENST00000470191 SMPD4Q9NXE4 827 aa9.79□□□□□ -0.84
CCDC171-204ENST00000470191 GCNT4Q9P109 453 aa9.79□□□□□ -0.84
CCDC171-204ENST00000470191 PILRBQ9UKJ0 227 aa9.79□□□□□ -0.84
CCDC171-204ENST00000470191 AGO2Q9UKV8 859 aaKnown RBP9.79□□□□□ -0.84
CCDC171-204ENST00000470191 L1RE1Q9UN81 338 aa9.79□□□□□ -0.84
CCDC171-204ENST00000470191 DERAQ9Y315 318 aa9.79□□□□□ -0.84
CCDC171-204ENST00000470191 ANKRD11Q6UB99 2663 aaPredicted RBP9.79□□□□□ -0.84
CCDC171-204ENST00000470191 GCN1Q92616 2671 aaKnown RBP9.78□□□□□ -0.84
CCDC171-204ENST00000470191 H0Y626 953 aa9.78□□□□□ -0.84
CCDC171-204ENST00000470191 AP5Z1O43299 807 aa9.78□□□□□ -0.84
CCDC171-204ENST00000470191 TRAK2O60296 914 aa9.78□□□□□ -0.84
CCDC171-204ENST00000470191 ATP2C2O75185 946 aa9.78□□□□□ -0.84
CCDC171-204ENST00000470191 KAT7O95251 611 aa9.78□□□□□ -0.84
CCDC171-204ENST00000470191 TRIM16O95361 564 aa9.78□□□□□ -0.84
CCDC171-204ENST00000470191 PIGRP01833 764 aa9.78□□□□□ -0.84
CCDC171-204ENST00000470191 ITGB3P05106 788 aa9.78□□□□□ -0.84
CCDC171-204ENST00000470191 KRT19P08727 400 aa9.78□□□□□ -0.84
CCDC171-204ENST00000470191 CD59P13987 128 aa9.78□□□□□ -0.84
CCDC171-204ENST00000470191 MYL7Q01449 175 aa9.78□□□□□ -0.84
CCDC171-204ENST00000470191 IFRD2Q12894 506 aaPredicted RBP9.78□□□□□ -0.84
CCDC171-204ENST00000470191 TRIP6Q15654 476 aaKnown RBP9.78□□□□□ -0.84
CCDC171-204ENST00000470191 MAP7D1Q3KQU3 841 aa9.78□□□□□ -0.84
CCDC171-204ENST00000470191 INTS6LQ5JSJ4 861 aaKnown RBP9.78□□□□□ -0.84
CCDC171-204ENST00000470191 EOGTQ5NDL2 527 aa9.78□□□□□ -0.84
CCDC171-204ENST00000470191 MCTP1Q6DN14 999 aa9.78□□□□□ -0.84
CCDC171-204ENST00000470191 RAB44Q7Z6P3 723 aaPredicted RBP9.78□□□□□ -0.84
CCDC171-204ENST00000470191 RGL4Q8IZJ4 473 aa9.78□□□□□ -0.84
CCDC171-204ENST00000470191 SPATA18Q8TC71 538 aa9.78□□□□□ -0.84
CCDC171-204ENST00000470191 POMGNT1Q8WZA1 660 aa9.78□□□□□ -0.84
CCDC171-204ENST00000470191 ASB7Q9H672 318 aa9.78□□□□□ -0.84
CCDC171-204ENST00000470191 CCDC86Q9H6F5 360 aaKnown RBP9.78□□□□□ -0.84
CCDC171-204ENST00000470191 ARHGEF4Q9NR80 690 aa9.78□□□□□ -0.84
CCDC171-204ENST00000470191 C2CD2Q9Y426 696 aa9.78□□□□□ -0.84
CCDC171-204ENST00000470191 MYO18AQ92614 2054 aaKnown RBP9.78□□□□□ -0.84
CCDC171-204ENST00000470191 FASNP49327 2511 aaKnown RBP9.78□□□□□ -0.84
CCDC171-204ENST00000470191 SHROOM3Q8TF72 1996 aa9.77□□□□□ -0.84
CCDC171-204ENST00000470191 LAD1O00515 517 aa9.77□□□□□ -0.85
CCDC171-204ENST00000470191 ARHGAP33O14559 1287 aa9.77□□□□□ -0.85
CCDC171-204ENST00000470191 ADAM23O75077 832 aa9.77□□□□□ -0.85
CCDC171-204ENST00000470191 CAPNS1P04632 268 aa9.77□□□□□ -0.85
CCDC171-204ENST00000470191 SERPINF2P08697 491 aa9.77□□□□□ -0.85
CCDC171-204ENST00000470191 FTH1P19P0C7X4 201 aa9.77□□□□□ -0.85
CCDC171-204ENST00000470191 PLCG1P19174 1290 aa9.77□□□□□ -0.85
CCDC171-204ENST00000470191 GRIK1P39086 918 aa9.77□□□□□ -0.85
CCDC171-204ENST00000470191 PRPHP41219 470 aa9.77□□□□□ -0.85
CCDC171-204ENST00000470191 WNT7BP56706 349 aa9.77□□□□□ -0.85
CCDC171-204ENST00000470191 USP46P62068 366 aa9.77□□□□□ -0.85
CCDC171-204ENST00000470191 PSMC1P62191 440 aaKnown RBP9.77□□□□□ -0.85
CCDC171-204ENST00000470191 ZNF33AQ06730 810 aa9.77□□□□□ -0.85
CCDC171-204ENST00000470191 BYSLQ13895 437 aaKnown RBP9.77□□□□□ -0.85
CCDC171-204ENST00000470191 MCM6Q14566 821 aa9.77□□□□□ -0.85
CCDC171-204ENST00000470191 DHCR24Q15392 516 aa9.77□□□□□ -0.85
CCDC171-204ENST00000470191 ZNF423Q2M1K9 1284 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms