RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 PLA1AQ53H76 456 aa6.58□□□□□ -1.36
COL11A1-208ENST00000470170 FCRL6Q6DN72 434 aa6.58□□□□□ -1.36
COL11A1-208ENST00000470170 SLC2A7Q6PXP3 512 aa6.58□□□□□ -1.36
COL11A1-208ENST00000470170 CAND1Q86VP6 1230 aaKnown RBP6.58□□□□□ -1.36
COL11A1-208ENST00000470170 GAS2L3Q86XJ1 694 aa6.58□□□□□ -1.36
COL11A1-208ENST00000470170 OR6B3Q8NGW1 331 aa6.58□□□□□ -1.36
COL11A1-208ENST00000470170 TMEM171Q8WVE6 324 aa6.58□□□□□ -1.36
COL11A1-208ENST00000470170 RPL36ALQ969Q0 106 aaKnown RBP6.58□□□□□ -1.36
COL11A1-208ENST00000470170 DAZAP1Q96EP5 407 aaKnown RBP6.58□□□□□ -1.36
COL11A1-208ENST00000470170 RITA1Q96K30 269 aa6.58□□□□□ -1.36
COL11A1-208ENST00000470170 ZIM2Q9NZV7 527 aa6.58□□□□□ -1.36
COL11A1-208ENST00000470170 ADAMTS3O15072 1205 aa6.57□□□□□ -1.36
COL11A1-208ENST00000470170 EXOC3O60645 756 aa6.57□□□□□ -1.36
COL11A1-208ENST00000470170 FPR3P25089 353 aa6.57□□□□□ -1.36
COL11A1-208ENST00000470170 PRKAG1P54619 331 aa6.57□□□□□ -1.36
COL11A1-208ENST00000470170 IGBP1P78318 339 aa6.57□□□□□ -1.36
COL11A1-208ENST00000470170 SLC13A2Q13183 592 aa6.57□□□□□ -1.36
COL11A1-208ENST00000470170 CYP1B1Q16678 543 aa6.57□□□□□ -1.36
COL11A1-208ENST00000470170 MORN5Q5VZ52 161 aa6.57□□□□□ -1.36
COL11A1-208ENST00000470170 SLC9A4Q6AI14 798 aa6.57□□□□□ -1.36
COL11A1-208ENST00000470170 C11orf87Q6NUJ2 197 aa6.57□□□□□ -1.36
COL11A1-208ENST00000470170 CATSPERGQ6ZRH7 1159 aa6.57□□□□□ -1.36
COL11A1-208ENST00000470170 OVCH2Q7RTZ1 564 aa6.57□□□□□ -1.36
COL11A1-208ENST00000470170 IZUMO1Q8IYV9 350 aa6.57□□□□□ -1.36
COL11A1-208ENST00000470170 BPIFB1Q8TDL5 484 aa6.57□□□□□ -1.36
COL11A1-208ENST00000470170 C5orf34Q96MH7 638 aa6.57□□□□□ -1.36
COL11A1-208ENST00000470170 ASB2Q96Q27 587 aa6.57□□□□□ -1.36
COL11A1-208ENST00000470170 THAP7Q9BT49 309 aaPredicted RBP6.57□□□□□ -1.36
COL11A1-208ENST00000470170 DPCDQ9BVM2 203 aaPredicted RBP6.57□□□□□ -1.36
COL11A1-208ENST00000470170 B3GNT5Q9BYG0 378 aa6.57□□□□□ -1.36
COL11A1-208ENST00000470170 DPH1Q9BZG8 443 aa6.57□□□□□ -1.36
COL11A1-208ENST00000470170 ATP6V0A4Q9HBG4 840 aa6.57□□□□□ -1.36
COL11A1-208ENST00000470170 PDGFCQ9NRA1 345 aa6.57□□□□□ -1.36
COL11A1-208ENST00000470170 TRMT13Q9NUP7 481 aaKnown RBP6.57□□□□□ -1.36
COL11A1-208ENST00000470170 TBC1D30Q9Y2I9 924 aa6.57□□□□□ -1.36
COL11A1-208ENST00000470170 AP4M1O00189 453 aa6.56□□□□□ -1.36
COL11A1-208ENST00000470170 DLDP09622 509 aaKnown RBP6.56□□□□□ -1.36
COL11A1-208ENST00000470170 SFPQP23246 707 aaKnown RBP eCLIP6.56□□□□□ -1.36
COL11A1-208ENST00000470170 ARHGAP25P42331 645 aa6.56□□□□□ -1.36
COL11A1-208ENST00000470170 AGFG1P52594 562 aaKnown RBP6.56□□□□□ -1.36
COL11A1-208ENST00000470170 E2F1Q01094 437 aa6.56□□□□□ -1.36
COL11A1-208ENST00000470170 GTF2H3Q13889 308 aa6.56□□□□□ -1.36
COL11A1-208ENST00000470170 TBC1D25Q3MII6 688 aa6.56□□□□□ -1.36
COL11A1-208ENST00000470170 ANO6Q4KMQ2 910 aa6.56□□□□□ -1.36
COL11A1-208ENST00000470170 NPNTQ6UXI9 565 aa6.56□□□□□ -1.36
COL11A1-208ENST00000470170 FAM177A1Q8N128 213 aaPredicted RBP6.56□□□□□ -1.36
COL11A1-208ENST00000470170 TERB1Q8NA31 727 aa6.56□□□□□ -1.36
COL11A1-208ENST00000470170 CAMKK2Q96RR4 588 aa6.56□□□□□ -1.36
COL11A1-208ENST00000470170 BHMT2Q9H2M3 363 aa6.56□□□□□ -1.36
COL11A1-208ENST00000470170 SMURF2Q9HAU4 748 aa6.56□□□□□ -1.36
COL11A1-208ENST00000470170 SMIM35A0A1B0GVV1 85 aa6.55□□□□□ -1.36
COL11A1-208ENST00000470170 H7C1Q1 480 aa6.55□□□□□ -1.36
COL11A1-208ENST00000470170 PHGDHO43175 533 aaKnown RBP6.55□□□□□ -1.36
COL11A1-208ENST00000470170 TBC1D4O60343 1298 aa6.55□□□□□ -1.36
COL11A1-208ENST00000470170 RFPL1O75677 317 aa6.55□□□□□ -1.36
COL11A1-208ENST00000470170 TUSC2O75896 110 aa6.55□□□□□ -1.36
COL11A1-208ENST00000470170 EPHB1P54762 984 aa6.55□□□□□ -1.36
COL11A1-208ENST00000470170 PTCHD3Q3KNS1 767 aa6.55□□□□□ -1.36
COL11A1-208ENST00000470170 C8orf58Q8NAV2 365 aa6.55□□□□□ -1.36
COL11A1-208ENST00000470170 IL31RAQ8NI17 732 aa6.55□□□□□ -1.36
COL11A1-208ENST00000470170 MAML1Q92585 1016 aa6.55□□□□□ -1.36
COL11A1-208ENST00000470170 PPP2R3CQ969Q6 453 aa6.55□□□□□ -1.36
COL11A1-208ENST00000470170 PRR25Q96S07 402 aa6.55□□□□□ -1.36
COL11A1-208ENST00000470170 C17orf80Q9BSJ5 609 aa6.55□□□□□ -1.36
COL11A1-208ENST00000470170 CIPCQ9C0C6 399 aa6.55□□□□□ -1.36
COL11A1-208ENST00000470170 GBA2Q9HCG7 927 aaPredicted RBP6.55□□□□□ -1.36
COL11A1-208ENST00000470170 PRKCBP05771 671 aa6.54□□□□□ -1.36
COL11A1-208ENST00000470170 SLC7A1P30825 629 aa6.54□□□□□ -1.36
COL11A1-208ENST00000470170 RENBPP51606 427 aa6.54□□□□□ -1.36
COL11A1-208ENST00000470170 ALDH5A1P51649 535 aaPredicted RBP6.54□□□□□ -1.36
COL11A1-208ENST00000470170 MLC1Q15049 377 aa6.54□□□□□ -1.36
COL11A1-208ENST00000470170 RNASE12Q5GAN4 147 aaKnown RBP6.54□□□□□ -1.36
COL11A1-208ENST00000470170 DCAF12L1Q5VU92 463 aa6.54□□□□□ -1.36
COL11A1-208ENST00000470170 SWSAP1Q6NVH7 229 aa6.54□□□□□ -1.36
COL11A1-208ENST00000470170 RAVER1Q8IY67 606 aaKnown RBP6.54□□□□□ -1.36
COL11A1-208ENST00000470170 GALNT16Q8N428 558 aa6.54□□□□□ -1.36
COL11A1-208ENST00000470170 ZNF366Q8N895 744 aa6.54□□□□□ -1.36
COL11A1-208ENST00000470170 Q8N9P0 234 aaPredicted RBP6.54□□□□□ -1.36
COL11A1-208ENST00000470170 SNX18Q96RF0 628 aa6.54□□□□□ -1.36
COL11A1-208ENST00000470170 KCNU1A8MYU2 1149 aa6.53□□□□□ -1.36
COL11A1-208ENST00000470170 POC1B-GALNT4F8VUJ3 575 aa6.53□□□□□ -1.36
COL11A1-208ENST00000470170 TBX3O15119 743 aa6.53□□□□□ -1.36
COL11A1-208ENST00000470170 EN2P19622 333 aaPredicted RBP6.53□□□□□ -1.36
COL11A1-208ENST00000470170 RAB32Q13637 225 aa6.53□□□□□ -1.36
COL11A1-208ENST00000470170 MTHFD1LQ6UB35 978 aa6.53□□□□□ -1.36
COL11A1-208ENST00000470170 ZDHHC24Q6UX98 284 aa6.53□□□□□ -1.36
COL11A1-208ENST00000470170 SERPINA13PQ6UXR4 307 aa6.53□□□□□ -1.36
COL11A1-208ENST00000470170 CNGA4Q8IV77 575 aa6.53□□□□□ -1.36
COL11A1-208ENST00000470170 GALNT4Q8N4A0 578 aa6.53□□□□□ -1.36
COL11A1-208ENST00000470170 DENND1AQ8TEH3 1009 aa6.53□□□□□ -1.36
COL11A1-208ENST00000470170 PRSS22Q9GZN4 317 aa6.53□□□□□ -1.36
COL11A1-208ENST00000470170 ZSCAN32Q9NX65 697 aa6.53□□□□□ -1.36
COL11A1-208ENST00000470170 THRAP3Q9Y2W1 955 aaKnown RBP6.53□□□□□ -1.36
COL11A1-208ENST00000470170 CTNND1O60716 968 aaKnown RBP6.52□□□□□ -1.37
COL11A1-208ENST00000470170 TOP3BO95985 862 aaKnown RBP6.52□□□□□ -1.37
COL11A1-208ENST00000470170 CERKLQ49MI3 558 aaPredicted RBP6.52□□□□□ -1.37
COL11A1-208ENST00000470170 CERCAMQ5T4B2 595 aa6.52□□□□□ -1.37
COL11A1-208ENST00000470170 MIS18BP1Q6P0N0 1132 aa6.52□□□□□ -1.37
COL11A1-208ENST00000470170 MAEAQ7L5Y9 396 aa6.52□□□□□ -1.37
COL11A1-208ENST00000470170 SPARTQ8N0X7 666 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms