RNA–Protein interactions for RNA: ENST00000470038.1

SNAP47-206, Transcript of synaptosome associated protein 47, humanhuman

TSL 3

Gene SNAP47, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-206ENST00000470038 STK38Q15208 465 aa17.28■□□□□ 0.36
SNAP47-206ENST00000470038 ST3GAL2Q16842 350 aa17.28■□□□□ 0.36
SNAP47-206ENST00000470038 N4BP2L1Q5TBK1 243 aaPredicted RBP17.28■□□□□ 0.36
SNAP47-206ENST00000470038 HS2ST1Q7LGA3 356 aa17.28■□□□□ 0.36
SNAP47-206ENST00000470038 TRAPPC11Q7Z392 1133 aa17.28■□□□□ 0.36
SNAP47-206ENST00000470038 LIMS2Q7Z4I7 341 aa17.28■□□□□ 0.36
SNAP47-206ENST00000470038 WDR49Q8IV35 697 aa17.28■□□□□ 0.36
SNAP47-206ENST00000470038 TSTD1Q8NFU3 115 aa17.28■□□□□ 0.36
SNAP47-206ENST00000470038 LRRC27Q9C0I9 530 aa17.28■□□□□ 0.36
SNAP47-206ENST00000470038 TNMDQ9H2S6 317 aa17.28■□□□□ 0.36
SNAP47-206ENST00000470038 SNX25Q9H3E2 840 aa17.28■□□□□ 0.36
SNAP47-206ENST00000470038 KIAA1586Q9HCI6 787 aa17.28■□□□□ 0.36
SNAP47-206ENST00000470038 FOXD4L1Q9NU39 408 aa17.28■□□□□ 0.36
SNAP47-206ENST00000470038 INVSQ9Y283 1065 aa17.28■□□□□ 0.36
SNAP47-206ENST00000470038 F8VP50 259 aa17.27■□□□□ 0.36
SNAP47-206ENST00000470038 LEFTY2O00292 366 aa17.27■□□□□ 0.36
SNAP47-206ENST00000470038 TM4SF5O14894 197 aa17.27■□□□□ 0.36
SNAP47-206ENST00000470038 TRIM66O15016 1216 aa17.27■□□□□ 0.36
SNAP47-206ENST00000470038 DLATP10515 647 aaKnown RBP17.27■□□□□ 0.36
SNAP47-206ENST00000470038 TNNI1P19237 187 aa17.27■□□□□ 0.36
SNAP47-206ENST00000470038 GNL1P36915 607 aaPredicted RBP17.27■□□□□ 0.36
SNAP47-206ENST00000470038 ASIC1P78348 528 aa17.27■□□□□ 0.36
SNAP47-206ENST00000470038 C2orf27AQ580R0 203 aa17.27■□□□□ 0.36
SNAP47-206ENST00000470038 MDH1BQ5I0G3 518 aa17.27■□□□□ 0.36
SNAP47-206ENST00000470038 RNF43Q68DV7 783 aa17.27■□□□□ 0.36
SNAP47-206ENST00000470038 TCEAL6Q6IPX3 200 aa17.27■□□□□ 0.36
SNAP47-206ENST00000470038 OR6B3Q8NGW1 331 aa17.27■□□□□ 0.36
SNAP47-206ENST00000470038 MYCBPAPQ8TBZ2 947 aa17.27■□□□□ 0.36
SNAP47-206ENST00000470038 TCEAL3Q969E4 200 aa17.27■□□□□ 0.36
SNAP47-206ENST00000470038 PCED1BQ96HM7 432 aa17.27■□□□□ 0.36
SNAP47-206ENST00000470038 CEP295NLQ96MC4 621 aa17.27■□□□□ 0.36
SNAP47-206ENST00000470038 MRPL45Q9BRJ2 306 aaKnown RBP17.27■□□□□ 0.36
SNAP47-206ENST00000470038 ZSCAN16Q9H4T2 348 aaPredicted RBP17.27■□□□□ 0.36
SNAP47-206ENST00000470038 EHD2Q9NZN4 543 aa17.27■□□□□ 0.36
SNAP47-206ENST00000470038 EBF1Q9UH73 591 aa17.27■□□□□ 0.36
SNAP47-206ENST00000470038 MTMR6Q9Y217 621 aa17.27■□□□□ 0.36
SNAP47-206ENST00000470038 MORC2Q9Y6X9 1032 aaPredicted RBP17.27■□□□□ 0.36
SNAP47-206ENST00000470038 EML5Q05BV3 1969 aa17.27■□□□□ 0.36
SNAP47-206ENST00000470038 ANAPC1Q9H1A4 1944 aa17.27■□□□□ 0.35
SNAP47-206ENST00000470038 CEP295Q9C0D2 2601 aa17.26■□□□□ 0.35
SNAP47-206ENST00000470038 CST3P01034 146 aaPredicted RBP17.26■□□□□ 0.35
SNAP47-206ENST00000470038 PFKLP17858 780 aa17.26■□□□□ 0.35
SNAP47-206ENST00000470038 HOXD13P35453 343 aa17.26■□□□□ 0.35
SNAP47-206ENST00000470038 ZXDBP98169 803 aa17.26■□□□□ 0.35
SNAP47-206ENST00000470038 AMPD3Q01432 767 aa17.26■□□□□ 0.35
SNAP47-206ENST00000470038 USP39Q53GS9 565 aaKnown RBP17.26■□□□□ 0.35
SNAP47-206ENST00000470038 USP33Q8TEY7 942 aa17.26■□□□□ 0.35
SNAP47-206ENST00000470038 DHX58Q96C10 678 aa17.26■□□□□ 0.35
SNAP47-206ENST00000470038 FNBP1Q96RU3 617 aa17.26■□□□□ 0.35
SNAP47-206ENST00000470038 TPSD1Q9BZJ3 242 aa17.26■□□□□ 0.35
SNAP47-206ENST00000470038 TRIM9Q9C026 710 aa17.26■□□□□ 0.35
SNAP47-206ENST00000470038 ANGPTL2Q9UKU9 493 aa17.26■□□□□ 0.35
SNAP47-206ENST00000470038 ZNF840PA6NDX5 716 aa17.25■□□□□ 0.35
SNAP47-206ENST00000470038 K7EQS6 105 aa17.25■□□□□ 0.35
SNAP47-206ENST00000470038 SCAMP3O14828 347 aaKnown RBP17.25■□□□□ 0.35
SNAP47-206ENST00000470038 CLIC2O15247 247 aa17.25■□□□□ 0.35
SNAP47-206ENST00000470038 EIF3DO15371 548 aaKnown RBP eCLIP17.25■□□□□ 0.35
SNAP47-206ENST00000470038 CAVIN2O95810 425 aa17.25■□□□□ 0.35
SNAP47-206ENST00000470038 OPRD1P41143 372 aa17.25■□□□□ 0.35
SNAP47-206ENST00000470038 NASPP49321 788 aaPredicted RBP17.25■□□□□ 0.35
SNAP47-206ENST00000470038 CYP2J2P51589 502 aa17.25■□□□□ 0.35
SNAP47-206ENST00000470038 TNNC1P63316 161 aa17.25■□□□□ 0.35
SNAP47-206ENST00000470038 IFRD2Q12894 506 aaPredicted RBP17.25■□□□□ 0.35
SNAP47-206ENST00000470038 SNRNP35Q16560 246 aaKnown RBP17.25■□□□□ 0.35
SNAP47-206ENST00000470038 WDR72Q3MJ13 1102 aa17.25■□□□□ 0.35
SNAP47-206ENST00000470038 TDRD10Q5VZ19 366 aaKnown RBP17.25■□□□□ 0.35
SNAP47-206ENST00000470038 ANO7Q6IWH7 933 aa17.25■□□□□ 0.35
SNAP47-206ENST00000470038 FILIP1Q7Z7B0 1213 aa17.25■□□□□ 0.35
SNAP47-206ENST00000470038 TTC30AQ86WT1 665 aa17.25■□□□□ 0.35
SNAP47-206ENST00000470038 CCDC33Q8N5R6 958 aa17.25■□□□□ 0.35
SNAP47-206ENST00000470038 LINC00301Q8NCQ3 95 aa17.25■□□□□ 0.35
SNAP47-206ENST00000470038 CCDC127Q96BQ5 260 aa17.25■□□□□ 0.35
SNAP47-206ENST00000470038 EDEM2Q9BV94 578 aa17.25■□□□□ 0.35
SNAP47-206ENST00000470038 TTLL2Q9BWV7 592 aa17.25■□□□□ 0.35
SNAP47-206ENST00000470038 RNF38Q9H0F5 515 aa17.25■□□□□ 0.35
SNAP47-206ENST00000470038 KBTBD4Q9NVX7 518 aa17.25■□□□□ 0.35
SNAP47-206ENST00000470038 SMPD4Q9NXE4 827 aa17.25■□□□□ 0.35
SNAP47-206ENST00000470038 CPQQ9Y646 472 aa17.25■□□□□ 0.35
SNAP47-206ENST00000470038 ABCA7Q8IZY2 2146 aa17.24■□□□□ 0.35
SNAP47-206ENST00000470038 USP24Q9UPU5 2620 aa17.24■□□□□ 0.35
SNAP47-206ENST00000470038 BCLAF3A2AJT9 711 aaKnown RBP17.24■□□□□ 0.35
SNAP47-206ENST00000470038 ANTXRLA6NF34 631 aa17.24■□□□□ 0.35
SNAP47-206ENST00000470038 SPTLC2O15270 562 aa17.24■□□□□ 0.35
SNAP47-206ENST00000470038 STX6O43752 255 aa17.24■□□□□ 0.35
SNAP47-206ENST00000470038 TACC1O75410 805 aa17.24■□□□□ 0.35
SNAP47-206ENST00000470038 CYP17A1P05093 508 aa17.24■□□□□ 0.35
SNAP47-206ENST00000470038 PTPN1P18031 435 aaKnown RBP17.24■□□□□ 0.35
SNAP47-206ENST00000470038 PPP3CCP48454 512 aa17.24■□□□□ 0.35
SNAP47-206ENST00000470038 NOP14P78316 857 aaKnown RBP17.24■□□□□ 0.35
SNAP47-206ENST00000470038 SLC7A9P82251 487 aa17.24■□□□□ 0.35
SNAP47-206ENST00000470038 TAF10Q12962 218 aa17.24■□□□□ 0.35
SNAP47-206ENST00000470038 TRPC3Q13507 836 aa17.24■□□□□ 0.35
SNAP47-206ENST00000470038 E2F4Q16254 413 aa17.24■□□□□ 0.35
SNAP47-206ENST00000470038 FAM26FQ5R3K3 315 aa17.24■□□□□ 0.35
SNAP47-206ENST00000470038 NELFCDQ8IXH7 590 aa17.24■□□□□ 0.35
SNAP47-206ENST00000470038 ZNF507Q8TCN5 953 aa17.24■□□□□ 0.35
SNAP47-206ENST00000470038 INTS4Q96HW7 963 aaKnown RBP17.24■□□□□ 0.35
SNAP47-206ENST00000470038 C8orf48Q96LL4 319 aa17.24■□□□□ 0.35
SNAP47-206ENST00000470038 SLITRK1Q96PX8 696 aa17.24■□□□□ 0.35
SNAP47-206ENST00000470038 CGRRF1Q99675 332 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms