RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 DIS3LQ8TF46 1054 aaKnown RBP19.06■□□□□ 0.64
SMC4-211ENST00000469858 RXFP2Q8WXD0 754 aa19.06■□□□□ 0.64
SMC4-211ENST00000469858 RNF25Q96BH1 459 aaPredicted RBP19.06■□□□□ 0.64
SMC4-211ENST00000469858 ACSF2Q96CM8 615 aaPredicted RBP19.06■□□□□ 0.64
SMC4-211ENST00000469858 ZNF333Q96JL9 665 aa19.06■□□□□ 0.64
SMC4-211ENST00000469858 CDH9Q9ULB4 789 aa19.06■□□□□ 0.64
SMC4-211ENST00000469858 PCDHB7Q9Y5E2 793 aa19.06■□□□□ 0.64
SMC4-211ENST00000469858 C2CD4BA6NLJ0 364 aa19.06■□□□□ 0.64
SMC4-211ENST00000469858 PI4K2BG5E9Z4 385 aa19.06■□□□□ 0.64
SMC4-211ENST00000469858 M0QZQ0 153 aa19.06■□□□□ 0.64
SMC4-211ENST00000469858 RARAP10276 462 aa19.06■□□□□ 0.64
SMC4-211ENST00000469858 RALAP11233 206 aa19.06■□□□□ 0.64
SMC4-211ENST00000469858 NPR3P17342 541 aa19.06■□□□□ 0.64
SMC4-211ENST00000469858 ZNF143P52747 638 aaPredicted RBP19.06■□□□□ 0.64
SMC4-211ENST00000469858 TLE2Q04725 743 aa19.06■□□□□ 0.64
SMC4-211ENST00000469858 SIX1Q15475 284 aaPredicted RBP19.06■□□□□ 0.64
SMC4-211ENST00000469858 PIGZQ86VD9 579 aa19.06■□□□□ 0.64
SMC4-211ENST00000469858 ZDHHC17Q8IUH5 632 aa19.06■□□□□ 0.64
SMC4-211ENST00000469858 IFT20Q8IY31 132 aa19.06■□□□□ 0.64
SMC4-211ENST00000469858 ABI1Q8IZP0 508 aa19.06■□□□□ 0.64
SMC4-211ENST00000469858 CLEC4CQ8WTT0 213 aa19.06■□□□□ 0.64
SMC4-211ENST00000469858 APBB2Q92870 758 aa19.06■□□□□ 0.64
SMC4-211ENST00000469858 PCED1BQ96HM7 432 aa19.06■□□□□ 0.64
SMC4-211ENST00000469858 HERPUD2Q9BSE4 406 aa19.06■□□□□ 0.64
SMC4-211ENST00000469858 ELAC1Q9H777 363 aaKnown RBP19.06■□□□□ 0.64
SMC4-211ENST00000469858 KRT82Q9NSB4 513 aa19.06■□□□□ 0.64
SMC4-211ENST00000469858 KANSL3Q9P2N6 904 aa19.06■□□□□ 0.64
SMC4-211ENST00000469858 DSEQ9UL01 958 aa19.06■□□□□ 0.64
SMC4-211ENST00000469858 TTC3P53804 2025 aa19.05■□□□□ 0.64
SMC4-211ENST00000469858 FSCN2O14926 492 aa19.05■□□□□ 0.64
SMC4-211ENST00000469858 TTI1O43156 1089 aa19.05■□□□□ 0.64
SMC4-211ENST00000469858 RNF8O76064 485 aa19.05■□□□□ 0.64
SMC4-211ENST00000469858 BEST1O76090 585 aa19.05■□□□□ 0.64
SMC4-211ENST00000469858 CYP11A1P05108 521 aa19.05■□□□□ 0.64
SMC4-211ENST00000469858 PDGFRAP16234 1089 aa19.05■□□□□ 0.64
SMC4-211ENST00000469858 PAX3P23760 479 aa19.05■□□□□ 0.64
SMC4-211ENST00000469858 ACADSBP45954 432 aa19.05■□□□□ 0.64
SMC4-211ENST00000469858 OR1G1P47890 313 aa19.05■□□□□ 0.64
SMC4-211ENST00000469858 PLCB3Q01970 1234 aa19.05■□□□□ 0.64
SMC4-211ENST00000469858 SLC25A11Q02978 314 aaKnown RBP19.05■□□□□ 0.64
SMC4-211ENST00000469858 SMTNL2Q2TAL5 461 aa19.05■□□□□ 0.64
SMC4-211ENST00000469858 MAP9Q49MG5 647 aa19.05■□□□□ 0.64
SMC4-211ENST00000469858 ODF2Q5BJF6 829 aa19.05■□□□□ 0.64
SMC4-211ENST00000469858 MAATS1Q7Z4T9 603 aa19.05■□□□□ 0.64
SMC4-211ENST00000469858 CTU1Q7Z7A3 348 aaKnown RBP19.05■□□□□ 0.64
SMC4-211ENST00000469858 COLGALT2Q8IYK4 626 aa19.05■□□□□ 0.64
SMC4-211ENST00000469858 MAGOHBQ96A72 148 aaKnown RBP19.05■□□□□ 0.64
SMC4-211ENST00000469858 RBM41Q96IZ5 413 aaKnown RBP19.05■□□□□ 0.64
SMC4-211ENST00000469858 SUSD3Q96L08 255 aa19.05■□□□□ 0.64
SMC4-211ENST00000469858 HSFY1Q96LI6 401 aa19.05■□□□□ 0.64
SMC4-211ENST00000469858 FAM193BQ96PV7 902 aaPredicted RBP19.05■□□□□ 0.64
SMC4-211ENST00000469858 RTP3Q9BQQ7 232 aa19.05■□□□□ 0.64
SMC4-211ENST00000469858 HEMGNQ9BXL5 484 aa19.05■□□□□ 0.64
SMC4-211ENST00000469858 ZWILCHQ9H900 591 aa19.05■□□□□ 0.64
SMC4-211ENST00000469858 CYLDQ9NQC7 956 aa19.05■□□□□ 0.64
SMC4-211ENST00000469858 ASNSD1Q9NWL6 643 aa19.05■□□□□ 0.64
SMC4-211ENST00000469858 FAM200BP0CF97 657 aa19.04■□□□□ 0.64
SMC4-211ENST00000469858 COL6A1P12109 1028 aa19.04■□□□□ 0.64
SMC4-211ENST00000469858 RPL34P49207 117 aaKnown RBP19.04■□□□□ 0.64
SMC4-211ENST00000469858 HADHQ16836 314 aaKnown RBP19.04■□□□□ 0.64
SMC4-211ENST00000469858 C15orf59Q2T9L4 293 aaPredicted RBP19.04■□□□□ 0.64
SMC4-211ENST00000469858 CLEC20AQ6ZU45 233 aa19.04■□□□□ 0.64
SMC4-211ENST00000469858 ANKS1BQ7Z6G8 1248 aa19.04■□□□□ 0.64
SMC4-211ENST00000469858 FAM35AQ86V20 835 aa19.04■□□□□ 0.64
SMC4-211ENST00000469858 SLITRK1Q96PX8 696 aa19.04■□□□□ 0.64
SMC4-211ENST00000469858 CNPY3Q9BT09 278 aa19.04■□□□□ 0.64
SMC4-211ENST00000469858 OSBPL8Q9BZF1 889 aa19.04■□□□□ 0.64
SMC4-211ENST00000469858 GDF3Q9NR23 364 aa19.04■□□□□ 0.64
SMC4-211ENST00000469858 DNAJB4Q9UDY4 337 aa19.04■□□□□ 0.64
SMC4-211ENST00000469858 LRFN2Q9ULH4 789 aa19.04■□□□□ 0.64
SMC4-211ENST00000469858 PRG3Q9Y2Y8 225 aaPredicted RBP19.04■□□□□ 0.64
SMC4-211ENST00000469858 IL1R2P27930 398 aa19.04■□□□□ 0.64
SMC4-211ENST00000469858 CHRNA3P32297 505 aa19.04■□□□□ 0.64
SMC4-211ENST00000469858 CYP2C18P33260 490 aa19.04■□□□□ 0.64
SMC4-211ENST00000469858 CETN2P41208 172 aa19.04■□□□□ 0.64
SMC4-211ENST00000469858 GATMP50440 423 aa19.04■□□□□ 0.64
SMC4-211ENST00000469858 MAP3K7CLP57077 242 aa19.04■□□□□ 0.64
SMC4-211ENST00000469858 DR1Q01658 176 aa19.04■□□□□ 0.64
SMC4-211ENST00000469858 ADIGQ0VDE8 80 aa19.04■□□□□ 0.64
SMC4-211ENST00000469858 ACAP1Q15027 740 aa19.04■□□□□ 0.64
SMC4-211ENST00000469858 CDO1Q16878 200 aa19.04■□□□□ 0.64
SMC4-211ENST00000469858 SH3PXD2AQ5TCZ1 1133 aa19.04■□□□□ 0.64
SMC4-211ENST00000469858 OVOS1Q6IE37 1185 aa19.04■□□□□ 0.64
SMC4-211ENST00000469858 FBXO46Q6PJ61 603 aaPredicted RBP19.04■□□□□ 0.64
SMC4-211ENST00000469858 POLNQ7Z5Q5 900 aa19.04■□□□□ 0.64
SMC4-211ENST00000469858 DEFB128Q7Z7B8 93 aa19.04■□□□□ 0.64
SMC4-211ENST00000469858 RCOR2Q8IZ40 523 aa19.04■□□□□ 0.64
SMC4-211ENST00000469858 MYCBPAPQ8TBZ2 947 aa19.04■□□□□ 0.64
SMC4-211ENST00000469858 SPATA18Q8TC71 538 aa19.04■□□□□ 0.64
SMC4-211ENST00000469858 KHSRPQ92945 711 aaKnown RBP eCLIP19.04■□□□□ 0.641e-7■■■■■ 32.8
SMC4-211ENST00000469858 CFAP57Q96MR6 1250 aa19.04■□□□□ 0.64
SMC4-211ENST00000469858 DDX56Q9NY93 547 aaKnown RBP19.04■□□□□ 0.64
SMC4-211ENST00000469858 PCSK1NQ9UHG2 260 aa19.04■□□□□ 0.64
SMC4-211ENST00000469858 LRRD1A4D1F6 860 aa19.03■□□□□ 0.64
SMC4-211ENST00000469858 KRT7P08729 469 aa19.03■□□□□ 0.64
SMC4-211ENST00000469858 MIPP30301 263 aa19.03■□□□□ 0.64
SMC4-211ENST00000469858 CYP1B1Q16678 543 aa19.03■□□□□ 0.64
SMC4-211ENST00000469858 KCNT1Q5JUK3 1230 aa19.03■□□□□ 0.64
SMC4-211ENST00000469858 MFSD7Q6UXD7 560 aa19.03■□□□□ 0.64
SMC4-211ENST00000469858 MAIP1Q8WWC4 291 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms