RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 C8orf48Q96LL4 319 aa15.65■□□□□ 0.1
COL9A3-209ENST00000469852 ASB2Q96Q27 587 aa15.65■□□□□ 0.1
COL9A3-209ENST00000469852 PRKD2Q9BZL6 878 aa15.65■□□□□ 0.1
COL9A3-209ENST00000469852 DNAI2Q9GZS0 605 aa15.65■□□□□ 0.1
COL9A3-209ENST00000469852 DMAP1Q9NPF5 467 aaPredicted RBP15.65■□□□□ 0.1
COL9A3-209ENST00000469852 ZDHHC7Q9NXF8 308 aa15.65■□□□□ 0.1
COL9A3-209ENST00000469852 AIPL1Q9NZN9 384 aa15.65■□□□□ 0.1
COL9A3-209ENST00000469852 THEGQ9P2T0 379 aa15.65■□□□□ 0.1
COL9A3-209ENST00000469852 CYTH4Q9UIA0 394 aa15.65■□□□□ 0.1
COL9A3-209ENST00000469852 LUC7L2Q9Y383 392 aaKnown RBP15.65■□□□□ 0.1
COL9A3-209ENST00000469852 ATP8B3O60423 1300 aa15.65■□□□□ 0.1
COL9A3-209ENST00000469852 C5orf42Q9H799 3197 aa15.65■□□□□ 0.1
COL9A3-209ENST00000469852 ZNF638Q14966 1978 aaKnown RBP15.64■□□□□ 0.09
COL9A3-209ENST00000469852 TNFRSF10BO14763 440 aa15.64■□□□□ 0.09
COL9A3-209ENST00000469852 NCK2O43639 380 aa15.64■□□□□ 0.09
COL9A3-209ENST00000469852 MFAP3LO75121 409 aa15.64■□□□□ 0.09
COL9A3-209ENST00000469852 GABBR2O75899 941 aa15.64■□□□□ 0.09
COL9A3-209ENST00000469852 HNRNPA1P09651 372 aaKnown RBP eCLIP15.64■□□□□ 0.09
COL9A3-209ENST00000469852 SKILP12757 684 aa15.64■□□□□ 0.09
COL9A3-209ENST00000469852 FERP16591 822 aa15.64■□□□□ 0.09
COL9A3-209ENST00000469852 KCNA5P22460 613 aa15.64■□□□□ 0.09
COL9A3-209ENST00000469852 CDC25BP30305 580 aa15.64■□□□□ 0.09
COL9A3-209ENST00000469852 HOXA9P31269 272 aa15.64■□□□□ 0.09
COL9A3-209ENST00000469852 ALDH1A3P47895 512 aa15.64■□□□□ 0.09
COL9A3-209ENST00000469852 PDE6CP51160 858 aa15.64■□□□□ 0.09
COL9A3-209ENST00000469852 BCAT1P54687 386 aa15.64■□□□□ 0.09
COL9A3-209ENST00000469852 BPIFB4P59827 614 aa15.64■□□□□ 0.09
COL9A3-209ENST00000469852 RPL10AP62906 217 aaKnown RBP15.64■□□□□ 0.09
COL9A3-209ENST00000469852 NTHL1P78549 312 aa15.64■□□□□ 0.09
COL9A3-209ENST00000469852 FMO1Q01740 532 aa15.64■□□□□ 0.09
COL9A3-209ENST00000469852 TRIM14Q14142 442 aa15.64■□□□□ 0.09
COL9A3-209ENST00000469852 GSE1Q14687 1217 aa15.64■□□□□ 0.09
COL9A3-209ENST00000469852 ASIC2Q16515 512 aa15.64■□□□□ 0.09
COL9A3-209ENST00000469852 HGSNATQ68CP4 663 aa15.64■□□□□ 0.09
COL9A3-209ENST00000469852 HS6ST3Q8IZP7 471 aa15.64■□□□□ 0.09
COL9A3-209ENST00000469852 WDTC1Q8N5D0 677 aa15.64■□□□□ 0.09
COL9A3-209ENST00000469852 IQCDQ96DY2 449 aa15.64■□□□□ 0.09
COL9A3-209ENST00000469852 SYT11Q9BT88 431 aa15.64■□□□□ 0.09
COL9A3-209ENST00000469852 ZNF334Q9HCZ1 680 aaPredicted RBP15.64■□□□□ 0.09
COL9A3-209ENST00000469852 DNMT3BQ9UBC3 853 aaKnown RBP15.64■□□□□ 0.09
COL9A3-209ENST00000469852 HESX1Q9UBX0 185 aa15.64■□□□□ 0.09
COL9A3-209ENST00000469852 DPP7Q9UHL4 492 aa15.64■□□□□ 0.09
COL9A3-209ENST00000469852 PCDHGC3Q9UN70 934 aa15.64■□□□□ 0.09
COL9A3-209ENST00000469852 OBSL1O75147 1896 aa15.63■□□□□ 0.09
COL9A3-209ENST00000469852 MYO16Q9Y6X6 1858 aa15.63■□□□□ 0.09
COL9A3-209ENST00000469852 SLC38A8A6NNN8 435 aa15.63■□□□□ 0.09
COL9A3-209ENST00000469852 TRIM66O15016 1216 aa15.63■□□□□ 0.09
COL9A3-209ENST00000469852 PLEKP08567 350 aaPredicted RBP15.63■□□□□ 0.09
COL9A3-209ENST00000469852 SRGAP2BP0DMP2 458 aa15.63■□□□□ 0.09
COL9A3-209ENST00000469852 HMGA1P17096 107 aaKnown RBP15.63■□□□□ 0.09
COL9A3-209ENST00000469852 GPD2P43304 727 aa15.63■□□□□ 0.09
COL9A3-209ENST00000469852 RGS7P49802 495 aa15.63■□□□□ 0.09
COL9A3-209ENST00000469852 EPHB3P54753 998 aa15.63■□□□□ 0.09
COL9A3-209ENST00000469852 CDR2Q01850 454 aa15.63■□□□□ 0.09
COL9A3-209ENST00000469852 BST2Q10589 180 aaKnown RBP15.63■□□□□ 0.09
COL9A3-209ENST00000469852 ARID5BQ14865 1188 aa15.63■□□□□ 0.09
COL9A3-209ENST00000469852 STILQ15468 1287 aa15.63■□□□□ 0.09
COL9A3-209ENST00000469852 PMF1Q6P1K2 205 aa15.63■□□□□ 0.09
COL9A3-209ENST00000469852 WDR59Q6PJI9 974 aa15.63■□□□□ 0.09
COL9A3-209ENST00000469852 PIGZQ86VD9 579 aa15.63■□□□□ 0.09
COL9A3-209ENST00000469852 TMC8Q8IU68 726 aa15.63■□□□□ 0.09
COL9A3-209ENST00000469852 SPC24Q8NBT2 197 aa15.63■□□□□ 0.09
COL9A3-209ENST00000469852 CMASQ8NFW8 434 aaPredicted RBP15.63■□□□□ 0.09
COL9A3-209ENST00000469852 SCAMP5Q8TAC9 235 aa15.63■□□□□ 0.09
COL9A3-209ENST00000469852 SMG7Q92540 1137 aaKnown RBP15.63■□□□□ 0.09
COL9A3-209ENST00000469852 PSMG2Q969U7 264 aa15.63■□□□□ 0.09
COL9A3-209ENST00000469852 SPATA17Q96L03 361 aa15.63■□□□□ 0.09
COL9A3-209ENST00000469852 PCDHB18PQ96TA0 734 aa15.63■□□□□ 0.09
COL9A3-209ENST00000469852 DNAJC7Q99615 494 aa15.63■□□□□ 0.09
COL9A3-209ENST00000469852 LRRC3Q9BY71 257 aa15.63■□□□□ 0.09
COL9A3-209ENST00000469852 HAUS4Q9H6D7 363 aa15.63■□□□□ 0.09
COL9A3-209ENST00000469852 DENND4AQ7Z401 1863 aa15.63■□□□□ 0.09
COL9A3-209ENST00000469852 GRXCR2A6NFK2 248 aa15.62■□□□□ 0.09
COL9A3-209ENST00000469852 XPO1O14980 1071 aaKnown RBP15.62■□□□□ 0.09
COL9A3-209ENST00000469852 MED7O43513 233 aa15.62■□□□□ 0.09
COL9A3-209ENST00000469852 POU2F2P09086 479 aa15.62■□□□□ 0.09
COL9A3-209ENST00000469852 HOXB8P17481 243 aaPredicted RBP15.62■□□□□ 0.09
COL9A3-209ENST00000469852 ANXA13P27216 316 aa15.62■□□□□ 0.09
COL9A3-209ENST00000469852 CCR2P41597 374 aa15.62■□□□□ 0.09
COL9A3-209ENST00000469852 PRKCIP41743 596 aa15.62■□□□□ 0.09
COL9A3-209ENST00000469852 SLC5A3P53794 718 aa15.62■□□□□ 0.09
COL9A3-209ENST00000469852 MRPS5P82675 430 aaKnown RBP15.62■□□□□ 0.09
COL9A3-209ENST00000469852 TFF2Q03403 129 aa15.62■□□□□ 0.09
COL9A3-209ENST00000469852 PLD1Q13393 1074 aa15.62■□□□□ 0.09
COL9A3-209ENST00000469852 ELMSAN1Q6PJG2 1045 aa15.62■□□□□ 0.09
COL9A3-209ENST00000469852 RTL10Q7L3V2 364 aa15.62■□□□□ 0.09
COL9A3-209ENST00000469852 ZNF571Q7Z3V5 609 aaPredicted RBP15.62■□□□□ 0.09
COL9A3-209ENST00000469852 GRASPQ7Z6J2 395 aaPredicted RBP15.62■□□□□ 0.09
COL9A3-209ENST00000469852 DNAJB7Q7Z6W7 309 aaPredicted RBP15.62■□□□□ 0.09
COL9A3-209ENST00000469852 GPR149Q86SP6 731 aa15.62■□□□□ 0.09
COL9A3-209ENST00000469852 TC2NQ8N9U0 490 aa15.62■□□□□ 0.09
COL9A3-209ENST00000469852 SMRP1Q8NCR6 262 aa15.62■□□□□ 0.09
COL9A3-209ENST00000469852 C1orf131Q8NDD1 294 aaKnown RBP15.62■□□□□ 0.09
COL9A3-209ENST00000469852 ZNF397Q8NF99 534 aaPredicted RBP15.62■□□□□ 0.09
COL9A3-209ENST00000469852 SLC35F5Q8WV83 523 aa15.62■□□□□ 0.09
COL9A3-209ENST00000469852 HLA-CQ95604 372 aa15.62■□□□□ 0.09
COL9A3-209ENST00000469852 AGPAT1Q99943 283 aa15.62■□□□□ 0.09
COL9A3-209ENST00000469852 CORO1BQ9BR76 489 aa15.62■□□□□ 0.09
COL9A3-209ENST00000469852 ADAM7Q9H2U9 754 aa15.62■□□□□ 0.09
COL9A3-209ENST00000469852 ABHD10Q9NUJ1 306 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms