RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 A0A1W2PQ27 194 aa17.38■□□□□ 0.37
COL9A3-208ENST00000469802 A0A1W2PQ64 194 aa17.38■□□□□ 0.37
COL9A3-208ENST00000469802 A0A1W2PQD8 194 aa17.38■□□□□ 0.37
COL9A3-208ENST00000469802 F8VP50 259 aa17.38■□□□□ 0.37
COL9A3-208ENST00000469802 TRDMT1O14717 391 aaKnown RBP17.38■□□□□ 0.37
COL9A3-208ENST00000469802 RHOBTB3O94955 611 aa17.38■□□□□ 0.37
COL9A3-208ENST00000469802 VNN1O95497 513 aa17.38■□□□□ 0.37
COL9A3-208ENST00000469802 RPN1P04843 607 aaKnown RBP17.38■□□□□ 0.37
COL9A3-208ENST00000469802 CKMP06732 381 aa17.38■□□□□ 0.37
COL9A3-208ENST00000469802 PRR29P0C7W0 189 aa17.38■□□□□ 0.37
COL9A3-208ENST00000469802 ARSAP15289 507 aa17.38■□□□□ 0.37
COL9A3-208ENST00000469802 PFKLP17858 780 aa17.38■□□□□ 0.37
COL9A3-208ENST00000469802 PTPN1P18031 435 aaKnown RBP17.38■□□□□ 0.37
COL9A3-208ENST00000469802 ANXA13P27216 316 aa17.38■□□□□ 0.37
COL9A3-208ENST00000469802 CACNA2D1P54289 1103 aa17.38■□□□□ 0.37
COL9A3-208ENST00000469802 PDGFRLQ15198 375 aa17.38■□□□□ 0.37
COL9A3-208ENST00000469802 ZNF699Q32M78 642 aa17.38■□□□□ 0.37
COL9A3-208ENST00000469802 ZACNQ401N2 412 aa17.38■□□□□ 0.37
COL9A3-208ENST00000469802 DCLK2Q8N568 766 aa17.38■□□□□ 0.37
COL9A3-208ENST00000469802 B3GALNT2Q8NCR0 500 aa17.38■□□□□ 0.37
COL9A3-208ENST00000469802 CYP2S1Q96SQ9 504 aa17.38■□□□□ 0.37
COL9A3-208ENST00000469802 ZNF518BQ9C0D4 1074 aa17.38■□□□□ 0.37
COL9A3-208ENST00000469802 C2orf42Q9NWW7 574 aa17.38■□□□□ 0.37
COL9A3-208ENST00000469802 NXF1Q9UBU9 619 aaKnown RBP17.38■□□□□ 0.37
COL9A3-208ENST00000469802 ARHGAP26Q9UNA1 814 aa17.38■□□□□ 0.37
COL9A3-208ENST00000469802 TRAF3IP3Q9Y228 551 aa17.38■□□□□ 0.37
COL9A3-208ENST00000469802 DNAH14Q0VDD8 3507 aa17.38■□□□□ 0.37
COL9A3-208ENST00000469802 RALGAPA1Q6GYQ0 2036 aa17.37■□□□□ 0.37
COL9A3-208ENST00000469802 PHACTR2O75167 634 aa17.37■□□□□ 0.37
COL9A3-208ENST00000469802 OLFM2O95897 454 aa17.37■□□□□ 0.37
COL9A3-208ENST00000469802 DLG4P78352 724 aa17.37■□□□□ 0.37
COL9A3-208ENST00000469802 DPYDQ12882 1025 aa17.37■□□□□ 0.37
COL9A3-208ENST00000469802 BIRC3Q13489 604 aa17.37■□□□□ 0.37
COL9A3-208ENST00000469802 NCOA4Q13772 614 aa17.37■□□□□ 0.37
COL9A3-208ENST00000469802 KCNB1Q14721 858 aa17.37■□□□□ 0.37
COL9A3-208ENST00000469802 FSTL4Q6MZW2 842 aa17.37■□□□□ 0.37
COL9A3-208ENST00000469802 CC2D1AQ6P1N0 951 aaPredicted RBP17.37■□□□□ 0.37
COL9A3-208ENST00000469802 ARL14EPQ8N8R7 260 aaPredicted RBP17.37■□□□□ 0.37
COL9A3-208ENST00000469802 TMC2Q8TDI7 906 aa17.37■□□□□ 0.37
COL9A3-208ENST00000469802 OSCP1Q8WVF1 389 aa17.37■□□□□ 0.37
COL9A3-208ENST00000469802 B3GNT5Q9BYG0 378 aa17.37■□□□□ 0.37
COL9A3-208ENST00000469802 SCAND2PQ9GZW5 306 aaPredicted RBP17.37■□□□□ 0.37
COL9A3-208ENST00000469802 GOLPH3LQ9H4A5 285 aa17.37■□□□□ 0.37
COL9A3-208ENST00000469802 ATP6V1DQ9Y5K8 247 aa17.37■□□□□ 0.37
COL9A3-208ENST00000469802 ZNF840PA6NDX5 716 aa17.36■□□□□ 0.37
COL9A3-208ENST00000469802 A8MXQ7 604 aa17.36■□□□□ 0.37
COL9A3-208ENST00000469802 MAPK13O15264 365 aa17.36■□□□□ 0.37
COL9A3-208ENST00000469802 HOXA6P31267 233 aa17.36■□□□□ 0.37
COL9A3-208ENST00000469802 PDE6CP51160 858 aa17.36■□□□□ 0.37
COL9A3-208ENST00000469802 ZXDBP98169 803 aa17.36■□□□□ 0.37
COL9A3-208ENST00000469802 NFIL3Q16649 462 aa17.36■□□□□ 0.37
COL9A3-208ENST00000469802 EML3Q32P44 896 aa17.36■□□□□ 0.37
COL9A3-208ENST00000469802 ZNF667Q5HYK9 610 aa17.36■□□□□ 0.37
COL9A3-208ENST00000469802 C1orf220Q5T0J3 134 aa17.36■□□□□ 0.37
COL9A3-208ENST00000469802 KRBA2Q6ZNG9 492 aa17.36■□□□□ 0.37
COL9A3-208ENST00000469802 KIAA2013Q8IYS2 634 aa17.36■□□□□ 0.37
COL9A3-208ENST00000469802 HINFPQ9BQA5 517 aa17.36■□□□□ 0.37
COL9A3-208ENST00000469802 SDCBP2Q9H190 292 aa17.36■□□□□ 0.37
COL9A3-208ENST00000469802 ECT2Q9H8V3 914 aa17.36■□□□□ 0.37
COL9A3-208ENST00000469802 EHD2Q9NZN4 543 aa17.36■□□□□ 0.37
COL9A3-208ENST00000469802 MYOFQ9NZM1 2061 aa17.35■□□□□ 0.37
COL9A3-208ENST00000469802 CLDN5O00501 218 aa17.35■□□□□ 0.37
COL9A3-208ENST00000469802 OAS1P00973 400 aaKnown RBP17.35■□□□□ 0.37
COL9A3-208ENST00000469802 HDCP19113 662 aa17.35■□□□□ 0.37
COL9A3-208ENST00000469802 GJA4P35212 333 aa17.35■□□□□ 0.37
COL9A3-208ENST00000469802 RAP1GAPP47736 663 aa17.35■□□□□ 0.37
COL9A3-208ENST00000469802 ID4P47928 161 aa17.35■□□□□ 0.37
COL9A3-208ENST00000469802 PPP3CCP48454 512 aa17.35■□□□□ 0.37
COL9A3-208ENST00000469802 CDH8P55286 799 aa17.35■□□□□ 0.37
COL9A3-208ENST00000469802 SLC7A9P82251 487 aa17.35■□□□□ 0.37
COL9A3-208ENST00000469802 DMWDQ09019 674 aa17.35■□□□□ 0.37
COL9A3-208ENST00000469802 PKN3Q6P5Z2 889 aa17.35■□□□□ 0.37
COL9A3-208ENST00000469802 CPA6Q8N4T0 437 aa17.35■□□□□ 0.37
COL9A3-208ENST00000469802 SH3RF2Q8TEC5 729 aa17.35■□□□□ 0.37
COL9A3-208ENST00000469802 ATP2A3Q93084 1043 aa17.35■□□□□ 0.37
COL9A3-208ENST00000469802 DUS2Q9NX74 493 aaKnown RBP17.35■□□□□ 0.37
COL9A3-208ENST00000469802 TRPM5Q9NZQ8 1165 aa17.35■□□□□ 0.37
COL9A3-208ENST00000469802 NCDNQ9UBB6 729 aa17.35■□□□□ 0.37
COL9A3-208ENST00000469802 WNT6Q9Y6F9 365 aa17.35■□□□□ 0.37
COL9A3-208ENST00000469802 IKBKBO14920 756 aa17.34■□□□□ 0.37
COL9A3-208ENST00000469802 CALUO43852 315 aaPredicted RBP17.34■□□□□ 0.37
COL9A3-208ENST00000469802 KIF20AO95235 890 aa17.34■□□□□ 0.37
COL9A3-208ENST00000469802 ASS1P00966 412 aaKnown RBP17.34■□□□□ 0.37
COL9A3-208ENST00000469802 AMPD2Q01433 879 aa17.34■□□□□ 0.37
COL9A3-208ENST00000469802 GRSF1Q12849 480 aaKnown RBP eCLIP17.34■□□□□ 0.373e-8■■■■■ 27.8
COL9A3-208ENST00000469802 ZCWPW2Q504Y3 356 aa17.34■□□□□ 0.37
COL9A3-208ENST00000469802 NAIF1Q69YI7 327 aaPredicted RBP17.34■□□□□ 0.37
COL9A3-208ENST00000469802 SCARA5Q6ZMJ2 495 aa17.34■□□□□ 0.37
COL9A3-208ENST00000469802 PAQR9Q6ZVX9 377 aa17.34■□□□□ 0.37
COL9A3-208ENST00000469802 SV2AQ7L0J3 742 aa17.34■□□□□ 0.37
COL9A3-208ENST00000469802 FAM35AQ86V20 835 aa17.34■□□□□ 0.37
COL9A3-208ENST00000469802 GUF1Q8N442 669 aaKnown RBP17.34■□□□□ 0.37
COL9A3-208ENST00000469802 KIAA1958Q8N8K9 716 aa17.34■□□□□ 0.37
COL9A3-208ENST00000469802 TAF4BQ92750 862 aa17.34■□□□□ 0.37
COL9A3-208ENST00000469802 ELMO3Q96BJ8 720 aa17.34■□□□□ 0.37
COL9A3-208ENST00000469802 RMDN1Q96DB5 314 aa17.34■□□□□ 0.37
COL9A3-208ENST00000469802 FBRSL1Q9HCM7 1045 aaKnown RBP17.34■□□□□ 0.37
COL9A3-208ENST00000469802 ATP8B3O60423 1300 aa17.33■□□□□ 0.36
COL9A3-208ENST00000469802 CHURC1-FNTBB4DL54 471 aa17.33■□□□□ 0.36
COL9A3-208ENST00000469802 EGFP01133 1207 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms