RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 CPNE8Q86YQ8 564 aa10.06□□□□□ -0.8
HDAC3-205ENST00000469550 KSR1Q8IVT5 923 aa10.06□□□□□ -0.8
HDAC3-205ENST00000469550 SYCP3Q8IZU3 236 aa10.06□□□□□ -0.8
HDAC3-205ENST00000469550 PHOSPHO2Q8TCD6 241 aa10.06□□□□□ -0.8
HDAC3-205ENST00000469550 BICD1Q96G01 975 aa10.06□□□□□ -0.8
HDAC3-205ENST00000469550 SCLYQ96I15 445 aa10.06□□□□□ -0.8
HDAC3-205ENST00000469550 BTBD6Q96KE9 485 aa10.06□□□□□ -0.8
HDAC3-205ENST00000469550 SMC6Q96SB8 1091 aa10.06□□□□□ -0.8
HDAC3-205ENST00000469550 FAM192AQ9GZU8 254 aa10.06□□□□□ -0.8
HDAC3-205ENST00000469550 MMADHCQ9H3L0 296 aaPredicted RBP10.06□□□□□ -0.8
HDAC3-205ENST00000469550 KIAA1586Q9HCI6 787 aa10.06□□□□□ -0.8
HDAC3-205ENST00000469550 FETUBQ9UGM5 382 aa10.06□□□□□ -0.8
HDAC3-205ENST00000469550 SLC24A2Q9UI40 661 aa10.06□□□□□ -0.8
HDAC3-205ENST00000469550 SCOCQ9UIL1 159 aa10.06□□□□□ -0.8
HDAC3-205ENST00000469550 ZFP69BQ9UJL9 534 aa10.06□□□□□ -0.8
HDAC3-205ENST00000469550 EXOC1LA0A1B0GW35 172 aa10.06□□□□□ -0.8
HDAC3-205ENST00000469550 NDC80O14777 642 aa10.06□□□□□ -0.8
HDAC3-205ENST00000469550 HGSO14964 777 aaPredicted RBP10.06□□□□□ -0.8
HDAC3-205ENST00000469550 ATMINO43313 823 aaPredicted RBP10.06□□□□□ -0.8
HDAC3-205ENST00000469550 TYROBPO43914 113 aa10.06□□□□□ -0.8
HDAC3-205ENST00000469550 ENTPD5O75356 428 aa10.06□□□□□ -0.8
HDAC3-205ENST00000469550 PSMD10O75832 226 aa10.06□□□□□ -0.8
HDAC3-205ENST00000469550 PDHA1P08559 390 aa10.06□□□□□ -0.8
HDAC3-205ENST00000469550 TXNP10599 105 aaKnown RBP10.06□□□□□ -0.8
HDAC3-205ENST00000469550 CYP2C9P11712 490 aa10.06□□□□□ -0.8
HDAC3-205ENST00000469550 RRM1P23921 792 aa10.06□□□□□ -0.8
HDAC3-205ENST00000469550 BRD2P25440 801 aaKnown RBP10.06□□□□□ -0.8
HDAC3-205ENST00000469550 KLRC2P26717 231 aa10.06□□□□□ -0.8
HDAC3-205ENST00000469550 ADSSP30520 456 aa10.06□□□□□ -0.8
HDAC3-205ENST00000469550 TAF1BQ53T94 588 aaPredicted RBP10.06□□□□□ -0.8
HDAC3-205ENST00000469550 IZUMO3Q5VZ72 239 aa10.06□□□□□ -0.8
HDAC3-205ENST00000469550 MAEAQ7L5Y9 396 aa10.06□□□□□ -0.8
HDAC3-205ENST00000469550 NLRP9Q7RTR0 991 aa10.06□□□□□ -0.8
HDAC3-205ENST00000469550 CLNKQ7Z7G1 428 aa10.06□□□□□ -0.8
HDAC3-205ENST00000469550 FBXO11Q86XK2 927 aa10.06□□□□□ -0.8
HDAC3-205ENST00000469550 MCF2L2Q86YR7 1114 aa10.06□□□□□ -0.8
HDAC3-205ENST00000469550 TPH2Q8IWU9 490 aa10.06□□□□□ -0.8
HDAC3-205ENST00000469550 DHX37Q8IY37 1157 aaKnown RBP10.06□□□□□ -0.8
HDAC3-205ENST00000469550 TTC8Q8TAM2 541 aa10.06□□□□□ -0.8
HDAC3-205ENST00000469550 KIFAP3Q92845 792 aa10.06□□□□□ -0.8
HDAC3-205ENST00000469550 DYDC2Q96IM9 177 aa10.06□□□□□ -0.8
HDAC3-205ENST00000469550 C9orf72Q96LT7 481 aa10.06□□□□□ -0.8
HDAC3-205ENST00000469550 KREMEN1Q96MU8 473 aa10.06□□□□□ -0.8
HDAC3-205ENST00000469550 IWS1Q96ST2 819 aa10.06□□□□□ -0.8
HDAC3-205ENST00000469550 RBM15Q96T37 977 aaKnown RBP eCLIP10.06□□□□□ -0.8
HDAC3-205ENST00000469550 SLC9A7Q96T83 725 aa10.06□□□□□ -0.8
HDAC3-205ENST00000469550 PAIP2Q9BPZ3 127 aaKnown RBP10.06□□□□□ -0.8
HDAC3-205ENST00000469550 CCDC28BQ9BUN5 200 aa10.06□□□□□ -0.8
HDAC3-205ENST00000469550 SLCO1B3Q9NPD5 702 aa10.06□□□□□ -0.8
HDAC3-205ENST00000469550 NMRK1Q9NWW6 199 aa10.06□□□□□ -0.8
HDAC3-205ENST00000469550 C2CD2Q9Y426 696 aa10.06□□□□□ -0.8
HDAC3-205ENST00000469550 CYP26A1O43174 497 aa10.05□□□□□ -0.8
HDAC3-205ENST00000469550 DNAJC6O75061 913 aa10.05□□□□□ -0.8
HDAC3-205ENST00000469550 ARIH2O95376 493 aa10.05□□□□□ -0.8
HDAC3-205ENST00000469550 CBX6O95503 412 aa10.05□□□□□ -0.8
HDAC3-205ENST00000469550 IQCF3P0C7M6 154 aa10.05□□□□□ -0.8
HDAC3-205ENST00000469550 MYBL1P10243 752 aa10.05□□□□□ -0.8
HDAC3-205ENST00000469550 ZNF76P36508 570 aa10.05□□□□□ -0.8
HDAC3-205ENST00000469550 SLC34A1Q06495 639 aa10.05□□□□□ -0.8
HDAC3-205ENST00000469550 BFSP2Q13515 415 aa10.05□□□□□ -0.8
HDAC3-205ENST00000469550 GSTA3Q16772 222 aa10.05□□□□□ -0.8
HDAC3-205ENST00000469550 KHDC1Q4VXA5 237 aaKnown RBP10.05□□□□□ -0.8
HDAC3-205ENST00000469550 SNX30Q5VWJ9 437 aa10.05□□□□□ -0.8
HDAC3-205ENST00000469550 FYB2Q5VWT5 728 aa10.05□□□□□ -0.8
HDAC3-205ENST00000469550 PPP2R2DQ66LE6 453 aa10.05□□□□□ -0.8
HDAC3-205ENST00000469550 ZNF449Q6P9G9 518 aa10.05□□□□□ -0.8
HDAC3-205ENST00000469550 OTOAQ7RTW8 1153 aa10.05□□□□□ -0.8
HDAC3-205ENST00000469550 SLC47A2Q86VL8 602 aa10.05□□□□□ -0.8
HDAC3-205ENST00000469550 XXYLT1Q8NBI6 393 aa10.05□□□□□ -0.8
HDAC3-205ENST00000469550 SYTL5Q8TDW5 730 aaPredicted RBP10.05□□□□□ -0.8
HDAC3-205ENST00000469550 ATG4AQ8WYN0 398 aa10.05□□□□□ -0.8
HDAC3-205ENST00000469550 DDX1Q92499 740 aaKnown RBP10.05□□□□□ -0.8
HDAC3-205ENST00000469550 ZNF75CPQ92670 426 aaPredicted RBP10.05□□□□□ -0.8
HDAC3-205ENST00000469550 SLC5A5Q92911 643 aa10.05□□□□□ -0.8
HDAC3-205ENST00000469550 EMID1Q96A84 441 aaPredicted RBP10.05□□□□□ -0.8
HDAC3-205ENST00000469550 TRIM11Q96F44 468 aa10.05□□□□□ -0.8
HDAC3-205ENST00000469550 DDX27Q96GQ7 796 aaKnown RBP10.05□□□□□ -0.8
HDAC3-205ENST00000469550 ASB2Q96Q27 587 aa10.05□□□□□ -0.8
HDAC3-205ENST00000469550 BTBD10Q9BSF8 475 aa10.05□□□□□ -0.8
HDAC3-205ENST00000469550 TIPINQ9BVW5 301 aa10.05□□□□□ -0.8
HDAC3-205ENST00000469550 DNAJC17Q9NVM6 304 aaKnown RBP10.05□□□□□ -0.8
HDAC3-205ENST00000469550 DLGAP2Q9P1A6 1054 aa10.05□□□□□ -0.8
HDAC3-205ENST00000469550 CHORDC1Q9UHD1 332 aaPredicted RBP10.05□□□□□ -0.8
HDAC3-205ENST00000469550 COQ4Q9Y3A0 265 aa10.05□□□□□ -0.8
HDAC3-205ENST00000469550 CHD9Q3L8U1 2897 aa10.05□□□□□ -0.8
HDAC3-205ENST00000469550 GSTTP1A0A1W2PQM5 241 aa10.05□□□□□ -0.8
HDAC3-205ENST00000469550 MAGEA13PA6NCF6 341 aa10.05□□□□□ -0.8
HDAC3-205ENST00000469550 TNFRSF10AO00220 468 aa10.05□□□□□ -0.8
HDAC3-205ENST00000469550 SPAG7O75391 227 aa10.05□□□□□ -0.8
HDAC3-205ENST00000469550 AP1G2O75843 785 aa10.05□□□□□ -0.8
HDAC3-205ENST00000469550 BAIAP3O94812 1187 aa10.05□□□□□ -0.8
HDAC3-205ENST00000469550 TROVE2P10155 538 aaKnown RBP eCLIP10.05□□□□□ -0.8
HDAC3-205ENST00000469550 GCLMP48507 274 aa10.05□□□□□ -0.8
HDAC3-205ENST00000469550 MXI1P50539 228 aa10.05□□□□□ -0.8
HDAC3-205ENST00000469550 RABGGTBP53611 331 aa10.05□□□□□ -0.8
HDAC3-205ENST00000469550 ARHGAP1Q07960 439 aa10.05□□□□□ -0.8
HDAC3-205ENST00000469550 TRIP13Q15645 432 aaPredicted RBP10.05□□□□□ -0.8
HDAC3-205ENST00000469550 CCDC6Q16204 474 aa10.05□□□□□ -0.8
HDAC3-205ENST00000469550 CLEC16AQ2KHT3 1053 aa10.05□□□□□ -0.8
HDAC3-205ENST00000469550 SAMD3Q8N6K7 520 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms