RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 KRTAP27-1Q3LI81 207 aa4.29□□□□□ -1.72
SSB-208ENST00000468600 RGS7BPQ6MZT1 257 aaPredicted RBP4.29□□□□□ -1.72
SSB-208ENST00000468600 KIRREL2Q6UWL6 708 aa4.29□□□□□ -1.72
SSB-208ENST00000468600 ABHD11Q8NFV4 315 aa4.29□□□□□ -1.72
SSB-208ENST00000468600 VCPIP1Q96JH7 1222 aa4.29□□□□□ -1.72
SSB-208ENST00000468600 ZC3H10Q96K80 434 aaKnown RBP4.29□□□□□ -1.72
SSB-208ENST00000468600 PPP1R10Q96QC0 940 aaKnown RBP4.29□□□□□ -1.72
SSB-208ENST00000468600 TCF7L1Q9HCS4 588 aa4.29□□□□□ -1.72
SSB-208ENST00000468600 SBNO2Q9Y2G9 1366 aa4.28□□□□□ -1.72
SSB-208ENST00000468600 UBE2Q2LH0YL09 131 aa4.28□□□□□ -1.72
SSB-208ENST00000468600 H3BUI4 141 aa4.28□□□□□ -1.72
SSB-208ENST00000468600 SNUPNO95149 360 aaKnown RBP4.28□□□□□ -1.72
SSB-208ENST00000468600 UNC5CO95185 931 aa4.28□□□□□ -1.72
SSB-208ENST00000468600 ALPLP05186 524 aa4.28□□□□□ -1.72
SSB-208ENST00000468600 PRKCBP05771 671 aa4.28□□□□□ -1.72
SSB-208ENST00000468600 THP07101 528 aa4.28□□□□□ -1.72
SSB-208ENST00000468600 CSF1RP07333 972 aa4.28□□□□□ -1.72
SSB-208ENST00000468600 ATP5F1P24539 256 aaPredicted RBP4.28□□□□□ -1.72
SSB-208ENST00000468600 TPTEP56180 551 aa4.28□□□□□ -1.72
SSB-208ENST00000468600 WNT3P56703 355 aa4.28□□□□□ -1.72
SSB-208ENST00000468600 SOX8P57073 446 aa4.28□□□□□ -1.72
SSB-208ENST00000468600 FAM50AQ14320 339 aaKnown RBP4.28□□□□□ -1.72
SSB-208ENST00000468600 FCRL6Q6DN72 434 aa4.28□□□□□ -1.72
SSB-208ENST00000468600 TERB1Q8NA31 727 aa4.28□□□□□ -1.72
SSB-208ENST00000468600 ZBTB8BQ8NAP8 495 aaPredicted RBP4.28□□□□□ -1.72
SSB-208ENST00000468600 COQ8BQ96D53 544 aa4.28□□□□□ -1.72
SSB-208ENST00000468600 R3HDM4Q96D70 268 aa4.28□□□□□ -1.72
SSB-208ENST00000468600 RSPRY1Q96DX4 576 aa4.28□□□□□ -1.72
SSB-208ENST00000468600 MVB12AQ96EY5 273 aa4.28□□□□□ -1.72
SSB-208ENST00000468600 SLC35A4Q96G79 324 aa4.28□□□□□ -1.72
SSB-208ENST00000468600 CDK5RAP3Q96JB5 506 aa4.28□□□□□ -1.72
SSB-208ENST00000468600 NUP88Q99567 741 aaPredicted RBP4.28□□□□□ -1.72
SSB-208ENST00000468600 MED16Q9Y2X0 877 aa4.28□□□□□ -1.72
SSB-208ENST00000468600 ERVV-2B6SEH9 535 aa4.27□□□□□ -1.73
SSB-208ENST00000468600 DSCR3O14972 297 aa4.27□□□□□ -1.73
SSB-208ENST00000468600 GRPP07492 148 aa4.27□□□□□ -1.73
SSB-208ENST00000468600 XRCC6P12956 609 aaKnown RBP eCLIP4.27□□□□□ -1.735e-6■□□□□ 10.3
SSB-208ENST00000468600 VCAM1P19320 739 aa4.27□□□□□ -1.73
SSB-208ENST00000468600 KCNJ5P48544 419 aa4.27□□□□□ -1.73
SSB-208ENST00000468600 PDE6CP51160 858 aa4.27□□□□□ -1.73
SSB-208ENST00000468600 GPSM2P81274 684 aa4.27□□□□□ -1.73
SSB-208ENST00000468600 HTRA4P83105 476 aaPredicted RBP4.27□□□□□ -1.73
SSB-208ENST00000468600 SATB1Q01826 763 aa4.27□□□□□ -1.73
SSB-208ENST00000468600 ZNF268Q14587 947 aaPredicted RBP4.27□□□□□ -1.73
SSB-208ENST00000468600 HSPBAP1Q96EW2 488 aa4.27□□□□□ -1.73
SSB-208ENST00000468600 LENG8Q96PV6 779 aaPredicted RBP4.27□□□□□ -1.73
SSB-208ENST00000468600 MESP1Q9BRJ9 268 aa4.27□□□□□ -1.73
SSB-208ENST00000468600 GTPBP4Q9BZE4 634 aaKnown RBP4.27□□□□□ -1.73
SSB-208ENST00000468600 SARS2Q9NP81 518 aaKnown RBP4.27□□□□□ -1.73
SSB-208ENST00000468600 XPR1Q9UBH6 696 aa4.27□□□□□ -1.73
SSB-208ENST00000468600 PROCRQ9UNN8 238 aa4.27□□□□□ -1.73
SSB-208ENST00000468600 LY6G6EA0A0G2JKS1 128 aa4.26□□□□□ -1.73
SSB-208ENST00000468600 TCRBV5S1A1TA0A578 114 aa4.26□□□□□ -1.73
SSB-208ENST00000468600 CD8B2A6NJW9 211 aa4.26□□□□□ -1.73
SSB-208ENST00000468600 CYP2A6P11509 494 aaPredicted RBP4.26□□□□□ -1.73
SSB-208ENST00000468600 MYCLP12524 364 aaPredicted RBP4.26□□□□□ -1.73
SSB-208ENST00000468600 HTR6P50406 440 aa4.26□□□□□ -1.73
SSB-208ENST00000468600 KRTAP10-5P60370 271 aa4.26□□□□□ -1.73
SSB-208ENST00000468600 MYO1EQ12965 1108 aa4.26□□□□□ -1.73
SSB-208ENST00000468600 ERV3-1Q14264 604 aa4.26□□□□□ -1.73
SSB-208ENST00000468600 KHDC1LQ5JSQ8 128 aa4.26□□□□□ -1.73
SSB-208ENST00000468600 MEX3CQ5U5Q3 659 aaKnown RBP4.26□□□□□ -1.73
SSB-208ENST00000468600 ZNF813Q6ZN06 617 aa4.26□□□□□ -1.73
SSB-208ENST00000468600 CATIPQ7Z7H3 387 aa4.26□□□□□ -1.73
SSB-208ENST00000468600 GAS2L3Q86XJ1 694 aa4.26□□□□□ -1.73
SSB-208ENST00000468600 ZNF398Q8TD17 642 aa4.26□□□□□ -1.73
SSB-208ENST00000468600 XAGE5Q8WWM1 108 aa4.26□□□□□ -1.73
SSB-208ENST00000468600 MTFMTQ96DP5 389 aaKnown RBP4.26□□□□□ -1.73
SSB-208ENST00000468600 FOXP1Q9H334 677 aaPredicted RBP4.26□□□□□ -1.73
SSB-208ENST00000468600 CXorf36Q9H7Y0 433 aa4.26□□□□□ -1.73
SSB-208ENST00000468600 SCAF8Q9UPN6 1271 aaKnown RBP4.26□□□□□ -1.73
SSB-208ENST00000468600 CADPSQ9ULU8 1353 aa4.26□□□□□ -1.73
SSB-208ENST00000468600 BTBD19C9JJ37 291 aa4.25□□□□□ -1.73
SSB-208ENST00000468600 FCHO1O14526 889 aa4.25□□□□□ -1.73
SSB-208ENST00000468600 KRT86O43790 486 aa4.25□□□□□ -1.73
SSB-208ENST00000468600 PRF1P14222 555 aa4.25□□□□□ -1.73
SSB-208ENST00000468600 MT3P25713 68 aa4.25□□□□□ -1.73
SSB-208ENST00000468600 EVA1CP58658 441 aa4.25□□□□□ -1.73
SSB-208ENST00000468600 NANOS2P60321 138 aaKnown RBP4.25□□□□□ -1.73
SSB-208ENST00000468600 HYAL1Q12794 435 aa4.25□□□□□ -1.73
SSB-208ENST00000468600 KRT81Q14533 505 aa4.25□□□□□ -1.73
SSB-208ENST00000468600 CYP1B1Q16678 543 aa4.25□□□□□ -1.73
SSB-208ENST00000468600 ATAT1Q5SQI0 421 aa4.25□□□□□ -1.73
SSB-208ENST00000468600 SERPINA13PQ6UXR4 307 aa4.25□□□□□ -1.73
SSB-208ENST00000468600 C9orf47Q6ZRZ4 202 aa4.25□□□□□ -1.73
SSB-208ENST00000468600 SLC15A3Q8IY34 581 aa4.25□□□□□ -1.73
SSB-208ENST00000468600 KRT78Q8N1N4 520 aa4.25□□□□□ -1.73
SSB-208ENST00000468600 PCSK9Q8NBP7 692 aaKnown RBP4.25□□□□□ -1.73
SSB-208ENST00000468600 ADAMTS18Q8TE60 1221 aa4.25□□□□□ -1.73
SSB-208ENST00000468600 OSCP1Q8WVF1 389 aa4.25□□□□□ -1.73
SSB-208ENST00000468600 THOC3Q96J01 351 aaKnown RBP4.25□□□□□ -1.73
SSB-208ENST00000468600 HIPK2Q9H2X6 1198 aa4.25□□□□□ -1.73
SSB-208ENST00000468600 TRMT13Q9NUP7 481 aaKnown RBP4.25□□□□□ -1.73
SSB-208ENST00000468600 CCNL1Q9UK58 526 aaPredicted RBP4.25□□□□□ -1.73
SSB-208ENST00000468600 PCDHA6Q9UN73 950 aa4.25□□□□□ -1.73
SSB-208ENST00000468600 TMX2Q9Y320 296 aa4.25□□□□□ -1.73
SSB-208ENST00000468600 A0A088AWK7 358 aa4.24□□□□□ -1.73
SSB-208ENST00000468600 PRSS44E7EML9 344 aa4.24□□□□□ -1.73
SSB-208ENST00000468600 H3BNX3 289 aa4.24□□□□□ -1.73
SSB-208ENST00000468600 hCG_1984214I3L0E3 225 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms