RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 BBS9Q3SYG4 887 aa16.54■□□□□ 0.24
TSPAN4-211ENST00000468468 TAF1BQ53T94 588 aaPredicted RBP16.54■□□□□ 0.24
TSPAN4-211ENST00000468468 FYB2Q5VWT5 728 aa16.54■□□□□ 0.24
TSPAN4-211ENST00000468468 C9orf131Q5VYM1 1079 aa16.54■□□□□ 0.24
TSPAN4-211ENST00000468468 BBS12Q6ZW61 710 aa16.54■□□□□ 0.24
TSPAN4-211ENST00000468468 PRRT2Q7Z6L0 340 aaPredicted RBP16.54■□□□□ 0.24
TSPAN4-211ENST00000468468 LONP2Q86WA8 852 aa16.54■□□□□ 0.24
TSPAN4-211ENST00000468468 UNC45BQ8IWX7 931 aa16.54■□□□□ 0.24
TSPAN4-211ENST00000468468 KCNV2Q8TDN2 545 aa16.54■□□□□ 0.24
TSPAN4-211ENST00000468468 KLF6Q99612 283 aaPredicted RBP16.54■□□□□ 0.24
TSPAN4-211ENST00000468468 ACSS3Q9H6R3 686 aa16.54■□□□□ 0.24
TSPAN4-211ENST00000468468 FETUBQ9UGM5 382 aa16.54■□□□□ 0.24
TSPAN4-211ENST00000468468 ZMYND8Q9ULU4 1186 aaPredicted RBP16.54■□□□□ 0.24
TSPAN4-211ENST00000468468 LOC285556D6RIA3 1793 aa16.53■□□□□ 0.24
TSPAN4-211ENST00000468468 IGKV6D-21A0A0A0MT36 114 aa16.53■□□□□ 0.24
TSPAN4-211ENST00000468468 TCRBV7S3A2A0A539 114 aa16.53■□□□□ 0.24
TSPAN4-211ENST00000468468 CDC25CP30307 473 aa16.53■□□□□ 0.24
TSPAN4-211ENST00000468468 NLRP9Q7RTR0 991 aa16.53■□□□□ 0.24
TSPAN4-211ENST00000468468 KIAA0319LQ8IZA0 1049 aa16.53■□□□□ 0.24
TSPAN4-211ENST00000468468 TCP10LQ8TDR4 215 aa16.53■□□□□ 0.24
TSPAN4-211ENST00000468468 WDR83Q9BRX9 315 aaKnown RBP16.53■□□□□ 0.24
TSPAN4-211ENST00000468468 TBC1D10AQ9BXI6 508 aa16.53■□□□□ 0.24
TSPAN4-211ENST00000468468 C12orf65Q9H3J6 166 aaKnown RBP16.53■□□□□ 0.24
TSPAN4-211ENST00000468468 TXNRD2Q9NNW7 524 aa16.53■□□□□ 0.24
TSPAN4-211ENST00000468468 ZFP69BQ9UJL9 534 aa16.53■□□□□ 0.24
TSPAN4-211ENST00000468468 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.53■□□□□ 0.24
TSPAN4-211ENST00000468468 OGTO15294 1046 aa16.53■□□□□ 0.24
TSPAN4-211ENST00000468468 CNMDO75829 334 aa16.53■□□□□ 0.24
TSPAN4-211ENST00000468468 PGK2P07205 417 aa16.53■□□□□ 0.24
TSPAN4-211ENST00000468468 CD48P09326 243 aa16.53■□□□□ 0.24
TSPAN4-211ENST00000468468 SRGAP2CP0DJJ0 459 aa16.53■□□□□ 0.24
TSPAN4-211ENST00000468468 RASSF2P50749 326 aa16.53■□□□□ 0.24
TSPAN4-211ENST00000468468 PSMC1P62191 440 aaKnown RBP16.53■□□□□ 0.24
TSPAN4-211ENST00000468468 YWHAEP62258 255 aaKnown RBP16.53■□□□□ 0.24
TSPAN4-211ENST00000468468 ANKRD20A2Q5SQ80 823 aa16.53■□□□□ 0.24
TSPAN4-211ENST00000468468 ANKRD20A1Q5TYW2 823 aa16.53■□□□□ 0.24
TSPAN4-211ENST00000468468 ANKRD20A3Q5VUR7 823 aa16.53■□□□□ 0.24
TSPAN4-211ENST00000468468 EMC1Q8N766 993 aa16.53■□□□□ 0.24
TSPAN4-211ENST00000468468 FAM13CQ8NE31 585 aa16.53■□□□□ 0.24
TSPAN4-211ENST00000468468 CDCA5Q96FF9 252 aa16.53■□□□□ 0.24
TSPAN4-211ENST00000468468 ACO2Q99798 780 aaKnown RBP16.53■□□□□ 0.24
TSPAN4-211ENST00000468468 DHRS4Q9BTZ2 278 aa16.53■□□□□ 0.24
TSPAN4-211ENST00000468468 FRMD8P1Q9BZ68 369 aaPredicted RBP16.53■□□□□ 0.24
TSPAN4-211ENST00000468468 PHACTR1Q9C0D0 580 aa16.53■□□□□ 0.24
TSPAN4-211ENST00000468468 SLC5A4Q9NY91 659 aa16.53■□□□□ 0.24
TSPAN4-211ENST00000468468 NXF1Q9UBU9 619 aaKnown RBP16.53■□□□□ 0.24
TSPAN4-211ENST00000468468 NKX1-2Q9UD57 310 aaPredicted RBP16.53■□□□□ 0.24
TSPAN4-211ENST00000468468 PCSK1NQ9UHG2 260 aa16.53■□□□□ 0.24
TSPAN4-211ENST00000468468 CYTH4Q9UIA0 394 aa16.53■□□□□ 0.24
TSPAN4-211ENST00000468468 FARP2O94887 1054 aaPredicted RBP16.52■□□□□ 0.24
TSPAN4-211ENST00000468468 ASPAP45381 313 aa16.52■□□□□ 0.24
TSPAN4-211ENST00000468468 STAT5BP51692 787 aa16.52■□□□□ 0.24
TSPAN4-211ENST00000468468 EFNA5P52803 228 aa16.52■□□□□ 0.24
TSPAN4-211ENST00000468468 RNASELQ05823 741 aaKnown RBP16.52■□□□□ 0.24
TSPAN4-211ENST00000468468 SLC45A4Q5BKX6 768 aa16.52■□□□□ 0.24
TSPAN4-211ENST00000468468 ERO1BQ86YB8 467 aa16.52■□□□□ 0.24
TSPAN4-211ENST00000468468 RFX6Q8HWS3 928 aa16.52■□□□□ 0.24
TSPAN4-211ENST00000468468 THNSL1Q8IYQ7 743 aa16.52■□□□□ 0.24
TSPAN4-211ENST00000468468 SLC17A7Q9P2U7 560 aa16.52■□□□□ 0.24
TSPAN4-211ENST00000468468 XPO7Q9UIA9 1087 aaKnown RBP16.52■□□□□ 0.24
TSPAN4-211ENST00000468468 POLIQ9UNA4 740 aa16.52■□□□□ 0.24
TSPAN4-211ENST00000468468 PAPPA2Q9BXP8 1791 aa16.52■□□□□ 0.24
TSPAN4-211ENST00000468468 C2CD2LO14523 706 aa16.52■□□□□ 0.23
TSPAN4-211ENST00000468468 TMEM63AO94886 807 aa16.52■□□□□ 0.23
TSPAN4-211ENST00000468468 TROVE2P10155 538 aaKnown RBP eCLIP16.52■□□□□ 0.23
TSPAN4-211ENST00000468468 EPHB2P29323 1055 aa16.52■□□□□ 0.23
TSPAN4-211ENST00000468468 ZC3H12AQ5D1E8 599 aaKnown RBP16.52■□□□□ 0.23
TSPAN4-211ENST00000468468 ANKRD13AQ8IZ07 590 aa16.52■□□□□ 0.23
TSPAN4-211ENST00000468468 PDIK1LQ8N165 341 aa16.52■□□□□ 0.23
TSPAN4-211ENST00000468468 FAM71DQ8N9W8 422 aa16.52■□□□□ 0.23
TSPAN4-211ENST00000468468 KCTD6Q8NC69 237 aa16.52■□□□□ 0.23
TSPAN4-211ENST00000468468 MZB1Q8WU39 189 aa16.52■□□□□ 0.23
TSPAN4-211ENST00000468468 DCAKDQ8WVC6 231 aa16.52■□□□□ 0.23
TSPAN4-211ENST00000468468 DCTN4Q9UJW0 460 aa16.52■□□□□ 0.23
TSPAN4-211ENST00000468468 CPSF3Q9UKF6 684 aaKnown RBP16.52■□□□□ 0.23
TSPAN4-211ENST00000468468 E7ESA3 106 aa16.51■□□□□ 0.23
TSPAN4-211ENST00000468468 MAFO75444 373 aaPredicted RBP16.51■□□□□ 0.23
TSPAN4-211ENST00000468468 ITGBL1O95965 494 aaPredicted RBP16.51■□□□□ 0.23
TSPAN4-211ENST00000468468 EDNRBP24530 442 aa16.51■□□□□ 0.23
TSPAN4-211ENST00000468468 RAP1GAPP47736 663 aa16.51■□□□□ 0.23
TSPAN4-211ENST00000468468 EIF3EP60228 445 aaKnown RBP16.51■□□□□ 0.23
TSPAN4-211ENST00000468468 BASP1P80723 227 aaKnown RBP16.51■□□□□ 0.23
TSPAN4-211ENST00000468468 OVGP1Q12889 678 aa16.51■□□□□ 0.23
TSPAN4-211ENST00000468468 SURF1Q15526 300 aa16.51■□□□□ 0.23
TSPAN4-211ENST00000468468 LY6KQ17RY6 165 aa16.51■□□□□ 0.23
TSPAN4-211ENST00000468468 Q3C1V9 767 aa16.51■□□□□ 0.23
TSPAN4-211ENST00000468468 PLEKHG4Q58EX7 1191 aa16.51■□□□□ 0.23
TSPAN4-211ENST00000468468 BZW1Q7L1Q6 419 aaKnown RBP16.51■□□□□ 0.23
TSPAN4-211ENST00000468468 MTDHQ86UE4 582 aaKnown RBP16.51■□□□□ 0.23
TSPAN4-211ENST00000468468 BANPQ8N9N5 519 aa16.51■□□□□ 0.23
TSPAN4-211ENST00000468468 ZBTB10Q96DT7 871 aa16.51■□□□□ 0.23
TSPAN4-211ENST00000468468 SPDL1Q96EA4 605 aa16.51■□□□□ 0.23
TSPAN4-211ENST00000468468 XYLT2Q9H1B5 865 aa16.51■□□□□ 0.23
TSPAN4-211ENST00000468468 RNPEPL1Q9HAU8 725 aa16.51■□□□□ 0.23
TSPAN4-211ENST00000468468 ALG13Q9NP73 1137 aaKnown RBP16.51■□□□□ 0.23
TSPAN4-211ENST00000468468 BATF3Q9NR55 127 aa16.51■□□□□ 0.23
TSPAN4-211ENST00000468468 METTL5Q9NRN9 209 aaKnown RBP16.51■□□□□ 0.23
TSPAN4-211ENST00000468468 ENO4A6NNW6 628 aa16.51■□□□□ 0.23
TSPAN4-211ENST00000468468 TM9SF1O15321 606 aa16.51■□□□□ 0.23
TSPAN4-211ENST00000468468 PRKCBP05771 671 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms