RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 RGL1Q9NZL6 768 aa12.65□□□□□ -0.38
VPS26A-204ENST00000467852 TLN1Q9Y490 2541 aaKnown RBP12.64□□□□□ -0.39
VPS26A-204ENST00000467852 E2F8A0AVK6 867 aa12.64□□□□□ -0.39
VPS26A-204ENST00000467852 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.64□□□□□ -0.39
VPS26A-204ENST00000467852 K7ENP7 123 aa12.64□□□□□ -0.39
VPS26A-204ENST00000467852 LDOC1O95751 146 aaPredicted RBP12.64□□□□□ -0.39
VPS26A-204ENST00000467852 KCNE1P15382 129 aa12.64□□□□□ -0.39
VPS26A-204ENST00000467852 POU3F2P20265 443 aaPredicted RBP12.64□□□□□ -0.39
VPS26A-204ENST00000467852 GLDCP23378 1020 aa12.64□□□□□ -0.39
VPS26A-204ENST00000467852 CSNK1EP49674 416 aaKnown RBP12.64□□□□□ -0.39
VPS26A-204ENST00000467852 EMP3P54852 163 aa12.64□□□□□ -0.39
VPS26A-204ENST00000467852 RESTQ13127 1097 aa12.64□□□□□ -0.39
VPS26A-204ENST00000467852 GAB4Q2WGN9 574 aa12.64□□□□□ -0.39
VPS26A-204ENST00000467852 DCAF12L1Q5VU92 463 aa12.64□□□□□ -0.39
VPS26A-204ENST00000467852 SDE2Q6IQ49 451 aa12.64□□□□□ -0.39
VPS26A-204ENST00000467852 INO80CQ6PI98 192 aaPredicted RBP12.64□□□□□ -0.39
VPS26A-204ENST00000467852 APOA5Q6Q788 366 aa12.64□□□□□ -0.39
VPS26A-204ENST00000467852 NUDT18Q6ZVK8 323 aa12.64□□□□□ -0.39
VPS26A-204ENST00000467852 LSMEM2Q8N112 164 aa12.64□□□□□ -0.39
VPS26A-204ENST00000467852 CACTIN-AS1Q8N1I8 211 aa12.64□□□□□ -0.39
VPS26A-204ENST00000467852 FAM26EQ8N5C1 309 aa12.64□□□□□ -0.39
VPS26A-204ENST00000467852 SH3RF2Q8TEC5 729 aa12.64□□□□□ -0.39
VPS26A-204ENST00000467852 C18orf25Q96B23 403 aaPredicted RBP12.64□□□□□ -0.39
VPS26A-204ENST00000467852 DYDC2Q96IM9 177 aa12.64□□□□□ -0.39
VPS26A-204ENST00000467852 HIC2Q96JB3 615 aa12.64□□□□□ -0.39
VPS26A-204ENST00000467852 NACC1Q96RE7 527 aa12.64□□□□□ -0.39
VPS26A-204ENST00000467852 CYP2S1Q96SQ9 504 aa12.64□□□□□ -0.39
VPS26A-204ENST00000467852 LRRC2Q9BYS8 371 aa12.64□□□□□ -0.39
VPS26A-204ENST00000467852 VAV3Q9UKW4 847 aa12.64□□□□□ -0.39
VPS26A-204ENST00000467852 MAGED2Q9UNF1 606 aaPredicted RBP12.64□□□□□ -0.39
VPS26A-204ENST00000467852 NBASA2RRP1 2371 aa12.64□□□□□ -0.39
VPS26A-204ENST00000467852 CLEC18AA5D8T8 446 aa12.63□□□□□ -0.39
VPS26A-204ENST00000467852 TBC1D3BA6NDS4 549 aa12.63□□□□□ -0.39
VPS26A-204ENST00000467852 TRIM66O15016 1216 aa12.63□□□□□ -0.39
VPS26A-204ENST00000467852 ZBTB43O43298 467 aa12.63□□□□□ -0.39
VPS26A-204ENST00000467852 NTSR1P30989 418 aa12.63□□□□□ -0.39
VPS26A-204ENST00000467852 GRM5P41594 1212 aa12.63□□□□□ -0.39
VPS26A-204ENST00000467852 OSTNP61366 133 aa12.63□□□□□ -0.39
VPS26A-204ENST00000467852 KDSRQ06136 332 aa12.63□□□□□ -0.39
VPS26A-204ENST00000467852 TEAD4Q15561 434 aa12.63□□□□□ -0.39
VPS26A-204ENST00000467852 KIF19Q2TAC6 998 aa12.63□□□□□ -0.39
VPS26A-204ENST00000467852 SLC39A12Q504Y0 691 aa12.63□□□□□ -0.39
VPS26A-204ENST00000467852 ATF7IP2Q5U623 682 aa12.63□□□□□ -0.39
VPS26A-204ENST00000467852 HIST2H2BCQ6DN03 193 aa12.63□□□□□ -0.39
VPS26A-204ENST00000467852 CLEC18BQ6UXF7 455 aa12.63□□□□□ -0.39
VPS26A-204ENST00000467852 DSTYKQ6XUX3 929 aa12.63□□□□□ -0.39
VPS26A-204ENST00000467852 SPNS2Q8IVW8 549 aa12.63□□□□□ -0.39
VPS26A-204ENST00000467852 CLEC18CQ8NCF0 446 aa12.63□□□□□ -0.39
VPS26A-204ENST00000467852 CCDC148Q8NFR7 591 aa12.63□□□□□ -0.39
VPS26A-204ENST00000467852 IPO4Q8TEX9 1081 aaKnown RBP12.63□□□□□ -0.39
VPS26A-204ENST00000467852 IGSF8Q969P0 613 aa12.63□□□□□ -0.39
VPS26A-204ENST00000467852 TOE1Q96GM8 510 aaKnown RBP12.63□□□□□ -0.39
VPS26A-204ENST00000467852 CNDP2Q96KP4 475 aaKnown RBP12.63□□□□□ -0.39
VPS26A-204ENST00000467852 FAM20AQ96MK3 541 aa12.63□□□□□ -0.39
VPS26A-204ENST00000467852 ARHGAP9Q9BRR9 750 aa12.63□□□□□ -0.39
VPS26A-204ENST00000467852 GPR174Q9BXC1 333 aa12.63□□□□□ -0.39
VPS26A-204ENST00000467852 ANKEF1Q9NU02 776 aa12.63□□□□□ -0.39
VPS26A-204ENST00000467852 UXTQ9UBK9 157 aaPredicted RBP12.63□□□□□ -0.39
VPS26A-204ENST00000467852 DDX25Q9UHL0 483 aaKnown RBP12.63□□□□□ -0.39
VPS26A-204ENST00000467852 EIF2B4Q9UI10 523 aaKnown RBP12.63□□□□□ -0.39
VPS26A-204ENST00000467852 CLCA2Q9UQC9 943 aa12.63□□□□□ -0.39
VPS26A-204ENST00000467852 SNX11Q9Y5W9 270 aa12.63□□□□□ -0.39
VPS26A-204ENST00000467852 STK36Q9NRP7 1315 aa12.62□□□□□ -0.39
VPS26A-204ENST00000467852 SFTPCP11686 197 aa12.62□□□□□ -0.39
VPS26A-204ENST00000467852 PRKCSHP14314 528 aaPredicted RBP12.62□□□□□ -0.39
VPS26A-204ENST00000467852 HMGA1P17096 107 aaKnown RBP12.62□□□□□ -0.39
VPS26A-204ENST00000467852 TNFSF9P41273 254 aa12.62□□□□□ -0.39
VPS26A-204ENST00000467852 WASP42768 502 aa12.62□□□□□ -0.39
VPS26A-204ENST00000467852 AFF3P51826 1226 aaKnown RBP12.62□□□□□ -0.39
VPS26A-204ENST00000467852 MESP2Q0VG99 397 aa12.62□□□□□ -0.39
VPS26A-204ENST00000467852 DNAJC3Q13217 504 aa12.62□□□□□ -0.39
VPS26A-204ENST00000467852 MOXD1Q6UVY6 613 aa12.62□□□□□ -0.39
VPS26A-204ENST00000467852 MAEAQ7L5Y9 396 aa12.62□□□□□ -0.39
VPS26A-204ENST00000467852 C2orf15Q8WU43 125 aaKnown RBP12.62□□□□□ -0.39
VPS26A-204ENST00000467852 RUFY2Q8WXA3 655 aa12.62□□□□□ -0.39
VPS26A-204ENST00000467852 LNPKQ9C0E8 428 aa12.62□□□□□ -0.39
VPS26A-204ENST00000467852 TTC12Q9H892 705 aaPredicted RBP12.62□□□□□ -0.39
VPS26A-204ENST00000467852 CD93Q9NPY3 652 aa12.62□□□□□ -0.39
VPS26A-204ENST00000467852 WSB2Q9NYS7 404 aaPredicted RBP12.62□□□□□ -0.39
VPS26A-204ENST00000467852 BSNQ9UPA5 3926 aa12.62□□□□□ -0.39
VPS26A-204ENST00000467852 ANAPC1Q9H1A4 1944 aa12.61□□□□□ -0.39
VPS26A-204ENST00000467852 A0A1W2PQF6 199 aa12.61□□□□□ -0.39
VPS26A-204ENST00000467852 GOLGA8AA7E2F4 631 aa12.61□□□□□ -0.39
VPS26A-204ENST00000467852 GOLGA8BA8MQT2 603 aa12.61□□□□□ -0.39
VPS26A-204ENST00000467852 METTL12A8MUP2 240 aa12.61□□□□□ -0.39
VPS26A-204ENST00000467852 BTBD18B2RXH4 712 aa12.61□□□□□ -0.39
VPS26A-204ENST00000467852 CYP17A1P05093 508 aa12.61□□□□□ -0.39
VPS26A-204ENST00000467852 CSH1P0DML2 217 aa12.61□□□□□ -0.39
VPS26A-204ENST00000467852 CSH2P0DML3 217 aa12.61□□□□□ -0.39
VPS26A-204ENST00000467852 TCF3P15923 654 aa12.61□□□□□ -0.39
VPS26A-204ENST00000467852 TYMPP19971 482 aa12.61□□□□□ -0.39
VPS26A-204ENST00000467852 ATP2B1P20020 1258 aa12.61□□□□□ -0.39
VPS26A-204ENST00000467852 ELAVL4P26378 380 aaKnown RBP12.61□□□□□ -0.39
VPS26A-204ENST00000467852 MLLT3P42568 568 aaPredicted RBP12.61□□□□□ -0.39
VPS26A-204ENST00000467852 INHBCP55103 352 aa12.61□□□□□ -0.39
VPS26A-204ENST00000467852 ERVPABLB-1P60509 514 aa12.61□□□□□ -0.39
VPS26A-204ENST00000467852 MMRN1Q13201 1228 aa12.61□□□□□ -0.39
VPS26A-204ENST00000467852 DHCR24Q15392 516 aa12.61□□□□□ -0.39
VPS26A-204ENST00000467852 NCAPH2Q6IBW4 605 aa12.61□□□□□ -0.39
VPS26A-204ENST00000467852 PADI6Q6TGC4 694 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms