RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 F11P03951 625 aa11.71□□□□□ -0.53
MSH5-212ENST00000467319 FAM200BP0CF97 657 aa11.71□□□□□ -0.53
MSH5-212ENST00000467319 MYL4P12829 197 aa11.71□□□□□ -0.53
MSH5-212ENST00000467319 NPR3P17342 541 aa11.71□□□□□ -0.53
MSH5-212ENST00000467319 FCARP24071 287 aa11.71□□□□□ -0.53
MSH5-212ENST00000467319 ANXA13P27216 316 aa11.71□□□□□ -0.53
MSH5-212ENST00000467319 GABRR2P28476 465 aa11.71□□□□□ -0.53
MSH5-212ENST00000467319 ADORA2BP29275 332 aa11.71□□□□□ -0.53
MSH5-212ENST00000467319 CDC25CP30307 473 aa11.71□□□□□ -0.53
MSH5-212ENST00000467319 GBP2P32456 591 aaPredicted RBP11.71□□□□□ -0.53
MSH5-212ENST00000467319 GRIK1P39086 918 aa11.71□□□□□ -0.53
MSH5-212ENST00000467319 MFAP3P55082 362 aa11.71□□□□□ -0.53
MSH5-212ENST00000467319 PKDCCQ504Y2 493 aa11.71□□□□□ -0.53
MSH5-212ENST00000467319 DENND5BQ6ZUT9 1274 aa11.71□□□□□ -0.53
MSH5-212ENST00000467319 LUZP1Q86V48 1076 aa11.71□□□□□ -0.53
MSH5-212ENST00000467319 TTC30AQ86WT1 665 aa11.71□□□□□ -0.53
MSH5-212ENST00000467319 RNF135Q8IUD6 432 aa11.71□□□□□ -0.53
MSH5-212ENST00000467319 PLCD3Q8N3E9 789 aa11.71□□□□□ -0.53
MSH5-212ENST00000467319 ANKRD20A12PQ8NF67 263 aa11.71□□□□□ -0.53
MSH5-212ENST00000467319 TFAP2BQ92481 460 aa11.71□□□□□ -0.53
MSH5-212ENST00000467319 CYFIP2Q96F07 1278 aa11.71□□□□□ -0.53
MSH5-212ENST00000467319 ERGIC2Q96RQ1 377 aa11.71□□□□□ -0.53
MSH5-212ENST00000467319 KCNK16Q96T55 309 aa11.71□□□□□ -0.53
MSH5-212ENST00000467319 MED10Q9BTT4 135 aa11.71□□□□□ -0.53
MSH5-212ENST00000467319 GPR88Q9GZN0 384 aa11.71□□□□□ -0.53
MSH5-212ENST00000467319 VPS16Q9H269 839 aa11.71□□□□□ -0.53
MSH5-212ENST00000467319 TRPV4Q9HBA0 871 aa11.71□□□□□ -0.53
MSH5-212ENST00000467319 UBE2TQ9NPD8 197 aaPredicted RBP11.71□□□□□ -0.53
MSH5-212ENST00000467319 UXTQ9UBK9 157 aaPredicted RBP11.71□□□□□ -0.53
MSH5-212ENST00000467319 PCDHB4Q9Y5E5 795 aa11.71□□□□□ -0.53
MSH5-212ENST00000467319 COL4A2P08572 1712 aa11.71□□□□□ -0.54
MSH5-212ENST00000467319 ANAPC1Q9H1A4 1944 aa11.7□□□□□ -0.54
MSH5-212ENST00000467319 MYO16Q9Y6X6 1858 aa11.7□□□□□ -0.54
MSH5-212ENST00000467319 VDRP11473 427 aa11.7□□□□□ -0.54
MSH5-212ENST00000467319 GJA1P17302 382 aa11.7□□□□□ -0.54
MSH5-212ENST00000467319 SSTR3P32745 418 aaPredicted RBP11.7□□□□□ -0.54
MSH5-212ENST00000467319 SLC5A3P53794 718 aa11.7□□□□□ -0.54
MSH5-212ENST00000467319 BCAT1P54687 386 aa11.7□□□□□ -0.54
MSH5-212ENST00000467319 ZNF445P59923 1031 aa11.7□□□□□ -0.54
MSH5-212ENST00000467319 TEAD2Q15562 447 aa11.7□□□□□ -0.54
MSH5-212ENST00000467319 MEA1Q16626 185 aa11.7□□□□□ -0.54
MSH5-212ENST00000467319 PTPN21Q16825 1174 aa11.7□□□□□ -0.54
MSH5-212ENST00000467319 GOLGA7BQ2TAP0 167 aa11.7□□□□□ -0.54
MSH5-212ENST00000467319 SGO2Q562F6 1265 aa11.7□□□□□ -0.54
MSH5-212ENST00000467319 FKBP15Q5T1M5 1219 aa11.7□□□□□ -0.54
MSH5-212ENST00000467319 STXBP5Q5T5C0 1151 aa11.7□□□□□ -0.54
MSH5-212ENST00000467319 KLHDC7AQ5VTJ3 777 aa11.7□□□□□ -0.54
MSH5-212ENST00000467319 LRSAM1Q6UWE0 723 aa11.7□□□□□ -0.54
MSH5-212ENST00000467319 GPRIN1Q7Z2K8 1008 aa11.7□□□□□ -0.54
MSH5-212ENST00000467319 KHSRPQ92945 711 aaKnown RBP eCLIP11.7□□□□□ -0.54
MSH5-212ENST00000467319 HEXIM2Q96MH2 286 aaKnown RBP11.7□□□□□ -0.54
MSH5-212ENST00000467319 ASB16Q96NS5 453 aa11.7□□□□□ -0.54
MSH5-212ENST00000467319 LSM14BQ9BX40 385 aaKnown RBP11.7□□□□□ -0.54
MSH5-212ENST00000467319 DUSP16Q9BY84 665 aa11.7□□□□□ -0.54
MSH5-212ENST00000467319 KIAA1257Q9ULG3 409 aa11.7□□□□□ -0.54
MSH5-212ENST00000467319 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.7□□□□□ -0.54
MSH5-212ENST00000467319 FHOD1Q9Y613 1164 aa11.7□□□□□ -0.54
MSH5-212ENST00000467319 HELZP42694 1942 aaKnown RBP11.7□□□□□ -0.54
MSH5-212ENST00000467319 A0A1B0GTH6 734 aa11.69□□□□□ -0.54
MSH5-212ENST00000467319 SOBPA7XYQ1 873 aa11.69□□□□□ -0.54
MSH5-212ENST00000467319 PES1O00541 588 aaKnown RBP11.69□□□□□ -0.54
MSH5-212ENST00000467319 EPHB6O15197 1021 aa11.69□□□□□ -0.54
MSH5-212ENST00000467319 RTN3O95197 1032 aaPredicted RBP11.69□□□□□ -0.54
MSH5-212ENST00000467319 ASGR2P07307 311 aa11.69□□□□□ -0.54
MSH5-212ENST00000467319 TPM2P07951 284 aa11.69□□□□□ -0.54
MSH5-212ENST00000467319 UCHL3P15374 230 aa11.69□□□□□ -0.54
MSH5-212ENST00000467319 CD19P15391 556 aa11.69□□□□□ -0.54
MSH5-212ENST00000467319 BRD2P25440 801 aaKnown RBP11.69□□□□□ -0.54
MSH5-212ENST00000467319 DDX6P26196 483 aaKnown RBP eCLIP11.69□□□□□ -0.54
MSH5-212ENST00000467319 WEE1P30291 646 aa11.69□□□□□ -0.54
MSH5-212ENST00000467319 KLK7P49862 253 aa11.69□□□□□ -0.54
MSH5-212ENST00000467319 MAP3K7CLP57077 242 aa11.69□□□□□ -0.54
MSH5-212ENST00000467319 CYP4F8P98187 520 aa11.69□□□□□ -0.54
MSH5-212ENST00000467319 SYCP1Q15431 976 aa11.69□□□□□ -0.54
MSH5-212ENST00000467319 LCLAT1Q6UWP7 414 aa11.69□□□□□ -0.54
MSH5-212ENST00000467319 FAM71AQ8IYT1 594 aa11.69□□□□□ -0.54
MSH5-212ENST00000467319 NUP93Q8N1F7 819 aa11.69□□□□□ -0.54
MSH5-212ENST00000467319 ANKRD52Q8NB46 1076 aa11.69□□□□□ -0.54
MSH5-212ENST00000467319 FGF14Q92915 247 aa11.69□□□□□ -0.54
MSH5-212ENST00000467319 ZSWIM3Q96MP5 696 aa11.69□□□□□ -0.54
MSH5-212ENST00000467319 GCNAQ96QF7 691 aa11.69□□□□□ -0.54
MSH5-212ENST00000467319 RTN4Q9NQC3 1192 aaKnown RBP11.69□□□□□ -0.54
MSH5-212ENST00000467319 COMMD8Q9NX08 183 aa11.69□□□□□ -0.54
MSH5-212ENST00000467319 EHD2Q9NZN4 543 aa11.69□□□□□ -0.54
MSH5-212ENST00000467319 IGSF9Q9P2J2 1179 aa11.69□□□□□ -0.54
MSH5-212ENST00000467319 ZMYM5Q9UJ78 669 aa11.69□□□□□ -0.54
MSH5-212ENST00000467319 DNAJC12Q9UKB3 198 aa11.69□□□□□ -0.54
MSH5-212ENST00000467319 TSPAN16Q9UKR8 245 aa11.69□□□□□ -0.54
MSH5-212ENST00000467319 DAAM1Q9Y4D1 1078 aa11.69□□□□□ -0.54
MSH5-212ENST00000467319 F8VZ95 297 aa11.68□□□□□ -0.54
MSH5-212ENST00000467319 TNFRSF10AO00220 468 aa11.68□□□□□ -0.54
MSH5-212ENST00000467319 XPO1O14980 1071 aaKnown RBP11.68□□□□□ -0.54
MSH5-212ENST00000467319 ECI2O75521 394 aa11.68□□□□□ -0.54
MSH5-212ENST00000467319 PRAMEF12O95522 483 aa11.68□□□□□ -0.54
MSH5-212ENST00000467319 OLFM2O95897 454 aa11.68□□□□□ -0.54
MSH5-212ENST00000467319 CALCAP01258 141 aa11.68□□□□□ -0.54
MSH5-212ENST00000467319 ZDHHC11BP0C7U3 371 aa11.68□□□□□ -0.54
MSH5-212ENST00000467319 PNMA6AP0CW24 399 aaPredicted RBP11.68□□□□□ -0.54
MSH5-212ENST00000467319 SETSIPP0DME0 302 aa11.68□□□□□ -0.54
MSH5-212ENST00000467319 KRT5P13647 590 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms