RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 FMO1Q01740 532 aa4.8□□□□□ -1.64
VPS13D-203ENST00000466732 GALEQ14376 348 aa4.8□□□□□ -1.64
VPS13D-203ENST00000466732 POLD3Q15054 466 aaPredicted RBP4.8□□□□□ -1.64
VPS13D-203ENST00000466732 C3orf38Q5JPI3 329 aa4.8□□□□□ -1.64
VPS13D-203ENST00000466732 AARS2Q5JTZ9 985 aaKnown RBP4.8□□□□□ -1.64
VPS13D-203ENST00000466732 FCRLBQ6BAA4 426 aa4.8□□□□□ -1.64
VPS13D-203ENST00000466732 PPP4R4Q6NUP7 873 aa4.8□□□□□ -1.64
VPS13D-203ENST00000466732 CEP85Q6P2H3 762 aa4.8□□□□□ -1.64
VPS13D-203ENST00000466732 DARS2Q6PI48 645 aaKnown RBP4.8□□□□□ -1.64
VPS13D-203ENST00000466732 FMNL3Q8IVF7 1028 aa4.8□□□□□ -1.64
VPS13D-203ENST00000466732 LRRC71Q8N4P6 559 aa4.8□□□□□ -1.64
VPS13D-203ENST00000466732 XAGE5Q8WWM1 108 aa4.8□□□□□ -1.64
VPS13D-203ENST00000466732 SOCS4Q8WXH5 440 aa4.8□□□□□ -1.64
VPS13D-203ENST00000466732 TBC1D5Q92609 795 aa4.8□□□□□ -1.64
VPS13D-203ENST00000466732 PPP2R3CQ969Q6 453 aa4.8□□□□□ -1.64
VPS13D-203ENST00000466732 SPSB4Q96A44 273 aa4.8□□□□□ -1.64
VPS13D-203ENST00000466732 APIPQ96GX9 242 aa4.8□□□□□ -1.64
VPS13D-203ENST00000466732 LRRC27Q9C0I9 530 aa4.8□□□□□ -1.64
VPS13D-203ENST00000466732 SERGEFQ9UGK8 458 aa4.8□□□□□ -1.64
VPS13D-203ENST00000466732 AFF4Q9UHB7 1163 aaKnown RBP4.8□□□□□ -1.64
VPS13D-203ENST00000466732 TARM1B6A8C7 271 aa4.79□□□□□ -1.64
VPS13D-203ENST00000466732 ZKSCAN1P17029 563 aaPredicted RBP4.79□□□□□ -1.64
VPS13D-203ENST00000466732 LY6KQ17RY6 165 aa4.79□□□□□ -1.64
VPS13D-203ENST00000466732 PTCHD3Q3KNS1 767 aa4.79□□□□□ -1.64
VPS13D-203ENST00000466732 PCID2Q5JVF3 399 aa4.79□□□□□ -1.64
VPS13D-203ENST00000466732 CYB5RLQ6IPT4 315 aa4.79□□□□□ -1.64
VPS13D-203ENST00000466732 PARS2Q7L3T8 475 aaKnown RBP4.79□□□□□ -1.64
VPS13D-203ENST00000466732 SLC29A4Q7RTT9 530 aa4.79□□□□□ -1.64
VPS13D-203ENST00000466732 IZUMO1Q8IYV9 350 aa4.79□□□□□ -1.64
VPS13D-203ENST00000466732 RP9Q8TA86 221 aaKnown RBP4.79□□□□□ -1.64
VPS13D-203ENST00000466732 HASPINQ8TF76 798 aa4.79□□□□□ -1.64
VPS13D-203ENST00000466732 TMEM171Q8WVE6 324 aa4.79□□□□□ -1.64
VPS13D-203ENST00000466732 REPS1Q96D71 796 aa4.79□□□□□ -1.64
VPS13D-203ENST00000466732 PPP1R9BQ96SB3 815 aa4.79□□□□□ -1.64
VPS13D-203ENST00000466732 XPNPEP3Q9NQH7 507 aa4.79□□□□□ -1.64
VPS13D-203ENST00000466732 PRDM11Q9NQV5 511 aa4.79□□□□□ -1.64
VPS13D-203ENST00000466732 TRMT13Q9NUP7 481 aaKnown RBP4.79□□□□□ -1.64
VPS13D-203ENST00000466732 OGDHLQ9ULD0 1010 aa4.79□□□□□ -1.64
VPS13D-203ENST00000466732 FRMD4BQ9Y2L6 1034 aa4.79□□□□□ -1.64
VPS13D-203ENST00000466732 SNX14Q9Y5W7 946 aa4.79□□□□□ -1.64
VPS13D-203ENST00000466732 PCSK5Q92824 1860 aa4.79□□□□□ -1.64
VPS13D-203ENST00000466732 WIPF3A6NGB9 483 aa4.78□□□□□ -1.64
VPS13D-203ENST00000466732 MANSC4A6NHS7 340 aaPredicted RBP4.78□□□□□ -1.64
VPS13D-203ENST00000466732 MGEA5O60502 916 aa4.78□□□□□ -1.64
VPS13D-203ENST00000466732 JTBO76095 146 aa4.78□□□□□ -1.64
VPS13D-203ENST00000466732 MAP4K4O95819 1239 aaPredicted RBP4.78□□□□□ -1.64
VPS13D-203ENST00000466732 RHCEP18577 417 aa4.78□□□□□ -1.64
VPS13D-203ENST00000466732 KLRC1P26715 233 aa4.78□□□□□ -1.64
VPS13D-203ENST00000466732 PEX2P28328 305 aa4.78□□□□□ -1.64
VPS13D-203ENST00000466732 TPTEP56180 551 aa4.78□□□□□ -1.64
VPS13D-203ENST00000466732 RPS16P62249 146 aaKnown RBP4.78□□□□□ -1.64
VPS13D-203ENST00000466732 RHDQ02161 417 aa4.78□□□□□ -1.64
VPS13D-203ENST00000466732 TFF2Q03403 129 aa4.78□□□□□ -1.64
VPS13D-203ENST00000466732 SLC9A4Q6AI14 798 aa4.78□□□□□ -1.64
VPS13D-203ENST00000466732 SUMO4Q6EEV6 95 aa4.78□□□□□ -1.64
VPS13D-203ENST00000466732 Q6ZWC4 215 aa4.78□□□□□ -1.64
VPS13D-203ENST00000466732 PTF1AQ7RTS3 328 aa4.78□□□□□ -1.64
VPS13D-203ENST00000466732 ZNF804AQ7Z570 1209 aa4.78□□□□□ -1.64
VPS13D-203ENST00000466732 SESTD1Q86VW0 696 aa4.78□□□□□ -1.64
VPS13D-203ENST00000466732 FANCBQ8NB91 859 aa4.78□□□□□ -1.64
VPS13D-203ENST00000466732 DPF1Q92782 380 aa4.78□□□□□ -1.64
VPS13D-203ENST00000466732 FSD1LQ9BXM9 530 aa4.78□□□□□ -1.64
VPS13D-203ENST00000466732 ZNF287Q9HBT7 754 aa4.78□□□□□ -1.64
VPS13D-203ENST00000466732 GBA2Q9HCG7 927 aaPredicted RBP4.78□□□□□ -1.64
VPS13D-203ENST00000466732 SH3BP4Q9P0V3 963 aa4.78□□□□□ -1.64
VPS13D-203ENST00000466732 COL20A1Q9P218 1284 aa4.78□□□□□ -1.64
VPS13D-203ENST00000466732 CCNL1Q9UK58 526 aaPredicted RBP4.78□□□□□ -1.64
VPS13D-203ENST00000466732 GABRQQ9UN88 632 aa4.78□□□□□ -1.64
VPS13D-203ENST00000466732 ADAMTS5Q9UNA0 930 aa4.78□□□□□ -1.64
VPS13D-203ENST00000466732 CDY1Q9Y6F8 540 aa4.78□□□□□ -1.64
VPS13D-203ENST00000466732 LOC102723971A0A1B0GUV8 181 aa4.77□□□□□ -1.65
VPS13D-203ENST00000466732 RASSF9O75901 435 aa4.77□□□□□ -1.65
VPS13D-203ENST00000466732 TJP3O95049 919 aa4.77□□□□□ -1.65
VPS13D-203ENST00000466732 VNN1O95497 513 aa4.77□□□□□ -1.65
VPS13D-203ENST00000466732 PRKCGP05129 697 aa4.77□□□□□ -1.65
VPS13D-203ENST00000466732 NPSP0C0P6 89 aa4.77□□□□□ -1.65
VPS13D-203ENST00000466732 CTGFP29279 349 aa4.77□□□□□ -1.65
VPS13D-203ENST00000466732 SEMA5AQ13591 1074 aa4.77□□□□□ -1.65
VPS13D-203ENST00000466732 INSCQ1MX18 579 aa4.77□□□□□ -1.65
VPS13D-203ENST00000466732 CERCAMQ5T4B2 595 aa4.77□□□□□ -1.65
VPS13D-203ENST00000466732 NAPRTQ6XQN6 538 aa4.77□□□□□ -1.65
VPS13D-203ENST00000466732 KCTD20Q7Z5Y7 419 aa4.77□□□□□ -1.65
VPS13D-203ENST00000466732 CAND1Q86VP6 1230 aaKnown RBP4.77□□□□□ -1.65
VPS13D-203ENST00000466732 SPARTQ8N0X7 666 aa4.77□□□□□ -1.65
VPS13D-203ENST00000466732 DNAJB14Q8TBM8 379 aa4.77□□□□□ -1.65
VPS13D-203ENST00000466732 C17orf80Q9BSJ5 609 aa4.77□□□□□ -1.65
VPS13D-203ENST00000466732 DPCDQ9BVM2 203 aaPredicted RBP4.77□□□□□ -1.65
VPS13D-203ENST00000466732 STK31Q9BXU1 1019 aa4.77□□□□□ -1.65
VPS13D-203ENST00000466732 DNMT3BQ9UBC3 853 aaKnown RBP4.77□□□□□ -1.65
VPS13D-203ENST00000466732 LINC01548A6NM66 108 aa4.76□□□□□ -1.65
VPS13D-203ENST00000466732 H7C4K7 107 aa4.76□□□□□ -1.65
VPS13D-203ENST00000466732 CCP110O43303 1012 aa4.76□□□□□ -1.65
VPS13D-203ENST00000466732 SRGAP2O75044 1071 aa4.76□□□□□ -1.65
VPS13D-203ENST00000466732 DLDP09622 509 aaKnown RBP4.76□□□□□ -1.65
VPS13D-203ENST00000466732 BCAT1P54687 386 aa4.76□□□□□ -1.65
VPS13D-203ENST00000466732 CYP4F2P78329 520 aa4.76□□□□□ -1.65
VPS13D-203ENST00000466732 FOXF2Q12947 444 aa4.76□□□□□ -1.65
VPS13D-203ENST00000466732 CCNIQ14094 377 aa4.76□□□□□ -1.65
VPS13D-203ENST00000466732 CYP1B1Q16678 543 aa4.76□□□□□ -1.65
VPS13D-203ENST00000466732 TBC1D25Q3MII6 688 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms