RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 FAM124BQ9H5Z6 455 aaPredicted RBP14.24□□□□□ -0.13
UBE4B-206ENST00000466379 AGO3Q9H9G7 860 aaKnown RBP14.24□□□□□ -0.13
UBE4B-206ENST00000466379 HOMER3Q9NSC5 361 aa14.24□□□□□ -0.13
UBE4B-206ENST00000466379 FAM105AQ9NUU6 356 aa14.24□□□□□ -0.13
UBE4B-206ENST00000466379 PSD3Q9NYI0 1048 aa14.24□□□□□ -0.13
UBE4B-206ENST00000466379 NEU2Q9Y3R4 380 aa14.24□□□□□ -0.13
UBE4B-206ENST00000466379 GRIN2DO15399 1336 aa14.24□□□□□ -0.13
UBE4B-206ENST00000466379 C2CD4BA6NLJ0 364 aa14.24□□□□□ -0.13
UBE4B-206ENST00000466379 ZSCAN5DPP0CG00 497 aa14.24□□□□□ -0.13
UBE4B-206ENST00000466379 ETS1P14921 441 aa14.24□□□□□ -0.13
UBE4B-206ENST00000466379 ATF2P15336 505 aa14.24□□□□□ -0.13
UBE4B-206ENST00000466379 PDGFRAP16234 1089 aa14.24□□□□□ -0.13
UBE4B-206ENST00000466379 CAPN2P17655 700 aa14.24□□□□□ -0.13
UBE4B-206ENST00000466379 THPOP40225 353 aa14.24□□□□□ -0.13
UBE4B-206ENST00000466379 ATP1A2P50993 1020 aa14.24□□□□□ -0.13
UBE4B-206ENST00000466379 ZNF143P52747 638 aaPredicted RBP14.24□□□□□ -0.13
UBE4B-206ENST00000466379 LILRA4P59901 499 aa14.24□□□□□ -0.13
UBE4B-206ENST00000466379 ATP11AP98196 1134 aa14.24□□□□□ -0.13
UBE4B-206ENST00000466379 SV2CQ496J9 727 aa14.24□□□□□ -0.13
UBE4B-206ENST00000466379 TTC19Q6DKK2 380 aaPredicted RBP14.24□□□□□ -0.13
UBE4B-206ENST00000466379 OLFML1Q6UWY5 402 aa14.24□□□□□ -0.13
UBE4B-206ENST00000466379 ZNF365Q70YC5 407 aa14.24□□□□□ -0.13
UBE4B-206ENST00000466379 ADGRF2Q8IZF7 708 aa14.24□□□□□ -0.13
UBE4B-206ENST00000466379 SNF8Q96H20 258 aa14.24□□□□□ -0.13
UBE4B-206ENST00000466379 ATP6V1G3Q96LB4 118 aa14.24□□□□□ -0.13
UBE4B-206ENST00000466379 PPP1R10Q96QC0 940 aaKnown RBP14.24□□□□□ -0.13
UBE4B-206ENST00000466379 GAD1Q99259 594 aa14.24□□□□□ -0.13
UBE4B-206ENST00000466379 C10orf88Q9H8K7 445 aa14.24□□□□□ -0.13
UBE4B-206ENST00000466379 MIOSQ9NXC5 875 aa14.24□□□□□ -0.13
UBE4B-206ENST00000466379 GDAP2Q9NXN4 497 aa14.24□□□□□ -0.13
UBE4B-206ENST00000466379 BCCIPQ9P287 314 aaKnown RBP eCLIP14.24□□□□□ -0.13
UBE4B-206ENST00000466379 USP18Q9UMW8 372 aa14.24□□□□□ -0.13
UBE4B-206ENST00000466379 PAPSS1O43252 624 aaPredicted RBP14.23□□□□□ -0.13
UBE4B-206ENST00000466379 ATP2C2O75185 946 aa14.23□□□□□ -0.13
UBE4B-206ENST00000466379 RNF8O76064 485 aa14.23□□□□□ -0.13
UBE4B-206ENST00000466379 TRUB2O95900 331 aaKnown RBP14.23□□□□□ -0.13
UBE4B-206ENST00000466379 KRT7P08729 469 aa14.23□□□□□ -0.13
UBE4B-206ENST00000466379 MYZAPP0CAP1 466 aa14.23□□□□□ -0.13
UBE4B-206ENST00000466379 KDELR1P24390 212 aa14.23□□□□□ -0.13
UBE4B-206ENST00000466379 ACAT1P24752 427 aaKnown RBP14.23□□□□□ -0.13
UBE4B-206ENST00000466379 GBP1P32455 592 aa14.23□□□□□ -0.13
UBE4B-206ENST00000466379 PNPLA4P41247 253 aa14.23□□□□□ -0.13
UBE4B-206ENST00000466379 COPS2P61201 443 aa14.23□□□□□ -0.13
UBE4B-206ENST00000466379 MGAT3Q09327 533 aa14.23□□□□□ -0.13
UBE4B-206ENST00000466379 PTGISQ16647 500 aa14.23□□□□□ -0.13
UBE4B-206ENST00000466379 KCTD6Q8NC69 237 aa14.23□□□□□ -0.13
UBE4B-206ENST00000466379 SMC1BQ8NDV3 1235 aa14.23□□□□□ -0.13
UBE4B-206ENST00000466379 SLC2A14Q8TDB8 520 aa14.23□□□□□ -0.13
UBE4B-206ENST00000466379 SLC4A5Q9BY07 1137 aa14.23□□□□□ -0.13
UBE4B-206ENST00000466379 AAASQ9NRG9 546 aa14.23□□□□□ -0.13
UBE4B-206ENST00000466379 ASNSD1Q9NWL6 643 aa14.23□□□□□ -0.13
UBE4B-206ENST00000466379 WHRNQ9P202 907 aa14.23□□□□□ -0.13
UBE4B-206ENST00000466379 ZNF148Q9UQR1 794 aa14.23□□□□□ -0.13
UBE4B-206ENST00000466379 GOLGA6L10A6NI86 522 aa14.22□□□□□ -0.13
UBE4B-206ENST00000466379 HUS1O60921 280 aa14.22□□□□□ -0.13
UBE4B-206ENST00000466379 ALDH1A1P00352 501 aa14.22□□□□□ -0.13
UBE4B-206ENST00000466379 LCP1P13796 627 aa14.22□□□□□ -0.13
UBE4B-206ENST00000466379 TKTP29401 623 aaKnown RBP14.22□□□□□ -0.13
UBE4B-206ENST00000466379 CD52P31358 61 aa14.22□□□□□ -0.13
UBE4B-206ENST00000466379 PTPN7P35236 360 aa14.22□□□□□ -0.13
UBE4B-206ENST00000466379 BYSLQ13895 437 aaKnown RBP14.22□□□□□ -0.13
UBE4B-206ENST00000466379 CCDC14Q49A88 953 aa14.22□□□□□ -0.13
UBE4B-206ENST00000466379 ARHGAP17Q68EM7 881 aa14.22□□□□□ -0.13
UBE4B-206ENST00000466379 SYDE1Q6ZW31 735 aaPredicted RBP14.22□□□□□ -0.13
UBE4B-206ENST00000466379 RNF169Q8NCN4 708 aa14.22□□□□□ -0.13
UBE4B-206ENST00000466379 GSTCDQ8NEC7 633 aa14.22□□□□□ -0.13
UBE4B-206ENST00000466379 KHSRPQ92945 711 aaKnown RBP eCLIP14.22□□□□□ -0.137e-8■□□□□ 9.2
UBE4B-206ENST00000466379 PABPC3Q9H361 631 aaKnown RBP14.22□□□□□ -0.13
UBE4B-206ENST00000466379 CST8O60676 142 aa14.22□□□□□ -0.13
UBE4B-206ENST00000466379 GHRP10912 638 aa14.22□□□□□ -0.13
UBE4B-206ENST00000466379 KLRC2P26717 231 aa14.22□□□□□ -0.13
UBE4B-206ENST00000466379 SP3Q02447 781 aa14.22□□□□□ -0.13
UBE4B-206ENST00000466379 IFFO1Q0D2I5 559 aa14.22□□□□□ -0.13
UBE4B-206ENST00000466379 MMRN1Q13201 1228 aa14.22□□□□□ -0.13
UBE4B-206ENST00000466379 SLC29A2Q14542 456 aa14.22□□□□□ -0.13
UBE4B-206ENST00000466379 KRT71Q3SY84 523 aa14.22□□□□□ -0.13
UBE4B-206ENST00000466379 RHBDF2Q6PJF5 856 aa14.22□□□□□ -0.13
UBE4B-206ENST00000466379 CYP4V2Q6ZWL3 525 aaPredicted RBP14.22□□□□□ -0.13
UBE4B-206ENST00000466379 CNPY3Q9BT09 278 aa14.22□□□□□ -0.13
UBE4B-206ENST00000466379 TRMT13Q9NUP7 481 aaKnown RBP14.22□□□□□ -0.13
UBE4B-206ENST00000466379 GPATCH2LQ9NWQ4 482 aa14.22□□□□□ -0.13
UBE4B-206ENST00000466379 FEZ2Q9UHY8 353 aaPredicted RBP14.22□□□□□ -0.13
UBE4B-206ENST00000466379 CLDN5O00501 218 aa14.21□□□□□ -0.13
UBE4B-206ENST00000466379 CYB561D2O14569 222 aa14.21□□□□□ -0.13
UBE4B-206ENST00000466379 MGEA5O60502 916 aa14.21□□□□□ -0.13
UBE4B-206ENST00000466379 TFE3P19532 575 aaPredicted RBP14.21□□□□□ -0.13
UBE4B-206ENST00000466379 ITIH2P19823 946 aa14.21□□□□□ -0.13
UBE4B-206ENST00000466379 LRPAP1P30533 357 aa14.21□□□□□ -0.13
UBE4B-206ENST00000466379 SLC6A3Q01959 620 aa14.21□□□□□ -0.13
UBE4B-206ENST00000466379 IZUMO3Q5VZ72 239 aa14.21□□□□□ -0.13
UBE4B-206ENST00000466379 WSCD1Q658N2 575 aa14.21□□□□□ -0.13
UBE4B-206ENST00000466379 DENND2CQ68D51 928 aa14.21□□□□□ -0.13
UBE4B-206ENST00000466379 SCYL2Q6P3W7 929 aa14.21□□□□□ -0.13
UBE4B-206ENST00000466379 TMEM110Q86TL2 294 aa14.21□□□□□ -0.13
UBE4B-206ENST00000466379 RFX6Q8HWS3 928 aa14.21□□□□□ -0.13
UBE4B-206ENST00000466379 CRYBG2Q8N1P7 616 aa14.21□□□□□ -0.13
UBE4B-206ENST00000466379 KLHDC9Q8NEP7 349 aa14.21□□□□□ -0.13
UBE4B-206ENST00000466379 HHIPL1Q96JK4 782 aa14.21□□□□□ -0.13
UBE4B-206ENST00000466379 TMEM121Q9BTD3 319 aa14.21□□□□□ -0.13
UBE4B-206ENST00000466379 DDX23Q9BUQ8 820 aaKnown RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms