RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 ATF6P18850 670 aa11.78□□□□□ -0.52
VCP-204ENST00000466100 TNFAIP3P21580 790 aa11.78□□□□□ -0.52
VCP-204ENST00000466100 KLRC2P26717 231 aa11.78□□□□□ -0.52
VCP-204ENST00000466100 PLA2G4AP47712 749 aa11.78□□□□□ -0.52
VCP-204ENST00000466100 GPR15P49685 360 aa11.78□□□□□ -0.52
VCP-204ENST00000466100 MAP3K7CLP57077 242 aa11.78□□□□□ -0.52
VCP-204ENST00000466100 PTP4A2Q12974 167 aa11.78□□□□□ -0.52
VCP-204ENST00000466100 PDCLQ13371 301 aa11.78□□□□□ -0.52
VCP-204ENST00000466100 SLC18A3Q16572 532 aa11.78□□□□□ -0.52
VCP-204ENST00000466100 HABP4Q5JVS0 413 aaKnown RBP11.78□□□□□ -0.52
VCP-204ENST00000466100 NAA35Q5VZE5 725 aa11.78□□□□□ -0.52
VCP-204ENST00000466100 PMF1Q6P1K2 205 aa11.78□□□□□ -0.52
VCP-204ENST00000466100 CCDC170Q8IYT3 715 aa11.78□□□□□ -0.52
VCP-204ENST00000466100 TMEM35BQ8NCS4 154 aa11.78□□□□□ -0.52
VCP-204ENST00000466100 CCDC112Q8NEF3 446 aa11.78□□□□□ -0.52
VCP-204ENST00000466100 VN1R2Q8NFZ6 395 aa11.78□□□□□ -0.52
VCP-204ENST00000466100 STK32AQ8WU08 396 aa11.78□□□□□ -0.52
VCP-204ENST00000466100 KCNK16Q96T55 309 aa11.78□□□□□ -0.52
VCP-204ENST00000466100 UBXN6Q9BZV1 441 aa11.78□□□□□ -0.52
VCP-204ENST00000466100 NSUN3Q9H649 340 aaKnown RBP11.78□□□□□ -0.52
VCP-204ENST00000466100 PNPLA8Q9NP80 782 aa11.78□□□□□ -0.52
VCP-204ENST00000466100 DMAP1Q9NPF5 467 aaPredicted RBP11.78□□□□□ -0.52
VCP-204ENST00000466100 ADAMTS1Q9UHI8 967 aa11.78□□□□□ -0.52
VCP-204ENST00000466100 NAGPAQ9UK23 515 aa11.78□□□□□ -0.52
VCP-204ENST00000466100 SLC27A5Q9Y2P5 690 aa11.78□□□□□ -0.52
VCP-204ENST00000466100 YIPF1Q9Y548 306 aa11.78□□□□□ -0.52
VCP-204ENST00000466100 HCFC2Q9Y5Z7 792 aa11.78□□□□□ -0.52
VCP-204ENST00000466100 MTCH2Q9Y6C9 303 aa11.78□□□□□ -0.52
VCP-204ENST00000466100 DENND4AQ7Z401 1863 aa11.77□□□□□ -0.53
VCP-204ENST00000466100 TRIM66O15016 1216 aa11.77□□□□□ -0.53
VCP-204ENST00000466100 PER2O15055 1255 aa11.77□□□□□ -0.53
VCP-204ENST00000466100 GZMAP12544 262 aa11.77□□□□□ -0.53
VCP-204ENST00000466100 GTF2F1P35269 517 aaKnown RBP eCLIP11.77□□□□□ -0.53
VCP-204ENST00000466100 GFPT1Q06210 699 aaPredicted RBP11.77□□□□□ -0.53
VCP-204ENST00000466100 HYAL1Q12794 435 aa11.77□□□□□ -0.53
VCP-204ENST00000466100 PTPN20Q4JDL3 420 aa11.77□□□□□ -0.53
VCP-204ENST00000466100 RAB41Q5JT25 222 aa11.77□□□□□ -0.53
VCP-204ENST00000466100 MON1BQ7L1V2 547 aa11.77□□□□□ -0.53
VCP-204ENST00000466100 GPRIN1Q7Z2K8 1008 aa11.77□□□□□ -0.53
VCP-204ENST00000466100 PIGZQ86VD9 579 aa11.77□□□□□ -0.53
VCP-204ENST00000466100 VPS36Q86VN1 386 aa11.77□□□□□ -0.53
VCP-204ENST00000466100 PHF13Q86YI8 300 aaPredicted RBP11.77□□□□□ -0.53
VCP-204ENST00000466100 KREMEN2Q8NCW0 462 aa11.77□□□□□ -0.53
VCP-204ENST00000466100 HDAC7Q8WUI4 952 aa11.77□□□□□ -0.53
VCP-204ENST00000466100 CPA5Q8WXQ8 436 aa11.77□□□□□ -0.53
VCP-204ENST00000466100 KCTD13Q8WZ19 329 aa11.77□□□□□ -0.53
VCP-204ENST00000466100 SPATA17Q96L03 361 aa11.77□□□□□ -0.53
VCP-204ENST00000466100 HSFY1Q96LI6 401 aa11.77□□□□□ -0.53
VCP-204ENST00000466100 CCDC42Q96M95 316 aa11.77□□□□□ -0.53
VCP-204ENST00000466100 CEP295NLQ96MC4 621 aa11.77□□□□□ -0.53
VCP-204ENST00000466100 CPXM1Q96SM3 734 aa11.77□□□□□ -0.53
VCP-204ENST00000466100 CDCA3Q99618 268 aaPredicted RBP11.77□□□□□ -0.53
VCP-204ENST00000466100 SLC4A5Q9BY07 1137 aa11.77□□□□□ -0.53
VCP-204ENST00000466100 ISCUQ9H1K1 167 aa11.77□□□□□ -0.53
VCP-204ENST00000466100 TLE6Q9H808 572 aa11.77□□□□□ -0.53
VCP-204ENST00000466100 CYP4F11Q9HBI6 524 aa11.77□□□□□ -0.53
VCP-204ENST00000466100 CYLDQ9NQC7 956 aa11.77□□□□□ -0.53
VCP-204ENST00000466100 SPTLC3Q9NUV7 552 aa11.77□□□□□ -0.53
VCP-204ENST00000466100 IL37Q9NZH6 218 aa11.77□□□□□ -0.53
VCP-204ENST00000466100 TJP2Q9UDY2 1190 aa11.77□□□□□ -0.53
VCP-204ENST00000466100 REXO2Q9Y3B8 237 aaKnown RBP11.77□□□□□ -0.53
VCP-204ENST00000466100 INSL5Q9Y5Q6 135 aa11.77□□□□□ -0.53
VCP-204ENST00000466100 NCANO14594 1321 aa11.77□□□□□ -0.53
VCP-204ENST00000466100 EIF3CLB5ME19 914 aaKnown RBP11.76□□□□□ -0.53
VCP-204ENST00000466100 ARHGAP6O43182 974 aa11.76□□□□□ -0.53
VCP-204ENST00000466100 AKR1B10O60218 316 aa11.76□□□□□ -0.53
VCP-204ENST00000466100 NDUFA10O95299 355 aa11.76□□□□□ -0.53
VCP-204ENST00000466100 GLP2RO95838 553 aa11.76□□□□□ -0.53
VCP-204ENST00000466100 PTMAP06454 111 aaKnown RBP11.76□□□□□ -0.53
VCP-204ENST00000466100 SPATA31D3P0C874 917 aa11.76□□□□□ -0.53
VCP-204ENST00000466100 MMP8P22894 467 aa11.76□□□□□ -0.53
VCP-204ENST00000466100 GRIK1P39086 918 aa11.76□□□□□ -0.53
VCP-204ENST00000466100 GABRB2P47870 512 aa11.76□□□□□ -0.53
VCP-204ENST00000466100 NRIP1P48552 1158 aa11.76□□□□□ -0.53
VCP-204ENST00000466100 TUFMP49411 452 aaKnown RBP11.76□□□□□ -0.53
VCP-204ENST00000466100 RGS7P49802 495 aa11.76□□□□□ -0.53
VCP-204ENST00000466100 RBM10P98175 930 aaKnown RBP11.76□□□□□ -0.53
VCP-204ENST00000466100 COL19A1Q14993 1142 aa11.76□□□□□ -0.53
VCP-204ENST00000466100 DDR2Q16832 855 aa11.76□□□□□ -0.53
VCP-204ENST00000466100 MGAT5BQ3V5L5 792 aa11.76□□□□□ -0.53
VCP-204ENST00000466100 TCEAL5Q5H9L2 206 aa11.76□□□□□ -0.53
VCP-204ENST00000466100 SDHAF4Q5VUM1 108 aa11.76□□□□□ -0.53
VCP-204ENST00000466100 ACAD10Q6JQN1 1059 aa11.76□□□□□ -0.53
VCP-204ENST00000466100 SPATA31D4Q6ZUB0 917 aa11.76□□□□□ -0.53
VCP-204ENST00000466100 RTL10Q7L3V2 364 aa11.76□□□□□ -0.53
VCP-204ENST00000466100 BHLHA9Q7RTU4 235 aa11.76□□□□□ -0.53
VCP-204ENST00000466100 TMEM110Q86TL2 294 aa11.76□□□□□ -0.53
VCP-204ENST00000466100 RBM23Q86U06 439 aaKnown RBP11.76□□□□□ -0.53
VCP-204ENST00000466100 DNAAF5Q86Y56 855 aa11.76□□□□□ -0.53
VCP-204ENST00000466100 SCN4BQ8IWT1 228 aa11.76□□□□□ -0.53
VCP-204ENST00000466100 STKLD1Q8NE28 680 aa11.76□□□□□ -0.53
VCP-204ENST00000466100 SLC7A14Q8TBB6 771 aa11.76□□□□□ -0.53
VCP-204ENST00000466100 EIF3CQ99613 913 aaKnown RBP11.76□□□□□ -0.53
VCP-204ENST00000466100 SEPT5Q99719 369 aaPredicted RBP11.76□□□□□ -0.53
VCP-204ENST00000466100 PDCL3Q9H2J4 239 aa11.76□□□□□ -0.53
VCP-204ENST00000466100 PLEKHA4Q9H4M7 779 aa11.76□□□□□ -0.53
VCP-204ENST00000466100 MAN1C1Q9NR34 630 aa11.76□□□□□ -0.53
VCP-204ENST00000466100 SEPT11Q9NVA2 429 aaKnown RBP11.76□□□□□ -0.53
VCP-204ENST00000466100 CEP83Q9Y592 693 aa11.76□□□□□ -0.53
VCP-204ENST00000466100 EPN1Q9Y6I3 576 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms